RNA–Protein interactions for RNA: ENST00000549752.1

CCDC38-207, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 476 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-207ENST00000549752 VPS53Q5VIR6 699 aa12.32□□□□□ -0.44
CCDC38-207ENST00000549752 MFSD6Q6ZSS7 791 aa12.32□□□□□ -0.44
CCDC38-207ENST00000549752 MSL3Q8N5Y2 521 aaKnown RBP12.32□□□□□ -0.44
CCDC38-207ENST00000549752 ARRDC4Q8NCT1 418 aa12.32□□□□□ -0.44
CCDC38-207ENST00000549752 REPS2Q8NFH8 660 aa12.32□□□□□ -0.44
CCDC38-207ENST00000549752 KIFC2Q96AC6 838 aa12.32□□□□□ -0.44
CCDC38-207ENST00000549752 DDX11Q96FC9 970 aa12.32□□□□□ -0.44
CCDC38-207ENST00000549752 MAML3Q96JK9 1138 aa12.32□□□□□ -0.44
CCDC38-207ENST00000549752 NUP88Q99567 741 aaPredicted RBP12.32□□□□□ -0.44
CCDC38-207ENST00000549752 FLRT1Q9NZU1 646 aa12.32□□□□□ -0.44
CCDC38-207ENST00000549752 ARIH1Q9Y4X5 557 aaPredicted RBP12.32□□□□□ -0.44
CCDC38-207ENST00000549752 ZNF213O14771 459 aa12.31□□□□□ -0.44
CCDC38-207ENST00000549752 FOXP2O15409 715 aa12.31□□□□□ -0.44
CCDC38-207ENST00000549752 SEPT4O43236 478 aa12.31□□□□□ -0.44
CCDC38-207ENST00000549752 COBLO75128 1261 aa12.31□□□□□ -0.44
CCDC38-207ENST00000549752 CYBAP13498 195 aa12.31□□□□□ -0.44
CCDC38-207ENST00000549752 CCDC178Q5BJE1 867 aa12.31□□□□□ -0.44
CCDC38-207ENST00000549752 HABP4Q5JVS0 413 aaKnown RBP12.31□□□□□ -0.44
CCDC38-207ENST00000549752 LHX8Q68G74 356 aa12.31□□□□□ -0.44
CCDC38-207ENST00000549752 RCSD1Q6JBY9 416 aa12.31□□□□□ -0.44
CCDC38-207ENST00000549752 CPXCR1Q8N123 301 aa12.31□□□□□ -0.44
CCDC38-207ENST00000549752 CHST13Q8NET6 341 aa12.31□□□□□ -0.44
CCDC38-207ENST00000549752 STAG1Q8WVM7 1258 aa12.31□□□□□ -0.44
CCDC38-207ENST00000549752 SLC38A10Q9HBR0 1119 aa12.31□□□□□ -0.44
CCDC38-207ENST00000549752 TCP11L1Q9NUJ3 509 aa12.31□□□□□ -0.44
CCDC38-207ENST00000549752 CTNNA3Q9UI47 895 aa12.31□□□□□ -0.44
CCDC38-207ENST00000549752 TMEM232C9JQI7 657 aa12.3□□□□□ -0.44
CCDC38-207ENST00000549752 DNM1LO00429 736 aa12.3□□□□□ -0.44
CCDC38-207ENST00000549752 IGHA2P01877 340 aa12.3□□□□□ -0.44
CCDC38-207ENST00000549752 TKFCQ3LXA3 575 aa12.3□□□□□ -0.44
CCDC38-207ENST00000549752 RRP12Q5JTH9 1297 aaKnown RBP12.3□□□□□ -0.44
CCDC38-207ENST00000549752 AKNAD1Q5T1N1 836 aa12.3□□□□□ -0.44
CCDC38-207ENST00000549752 CWC27Q6UX04 472 aaKnown RBP12.3□□□□□ -0.44
CCDC38-207ENST00000549752 ZNF589Q86UQ0 364 aaPredicted RBP12.3□□□□□ -0.44
CCDC38-207ENST00000549752 DIS3LQ8TF46 1054 aaKnown RBP12.3□□□□□ -0.44
CCDC38-207ENST00000549752 DCAF4Q8WV16 495 aa12.3□□□□□ -0.44
CCDC38-207ENST00000549752 RUFY2Q8WXA3 655 aa12.3□□□□□ -0.44
CCDC38-207ENST00000549752 ESR2Q92731 530 aa12.3□□□□□ -0.44
CCDC38-207ENST00000549752 TTC14Q96N46 770 aa12.3□□□□□ -0.44
CCDC38-207ENST00000549752 PHF12Q96QT6 1004 aa12.3□□□□□ -0.44
CCDC38-207ENST00000549752 TINF2Q9BSI4 451 aa12.3□□□□□ -0.44
CCDC38-207ENST00000549752 PNMA2Q9UL42 364 aa12.3□□□□□ -0.44
CCDC38-207ENST00000549752 CNPY2Q9Y2B0 182 aa12.3□□□□□ -0.44
CCDC38-207ENST00000549752 KBTBD13C9JR72 458 aa12.29□□□□□ -0.44
CCDC38-207ENST00000549752 TOP1P11387 765 aaKnown RBP12.29□□□□□ -0.44
CCDC38-207ENST00000549752 MCCP23508 829 aa12.29□□□□□ -0.44
CCDC38-207ENST00000549752 NOVP48745 357 aa12.29□□□□□ -0.44
CCDC38-207ENST00000549752 SLC4A3P48751 1232 aa12.29□□□□□ -0.44
CCDC38-207ENST00000549752 IMMTQ16891 758 aaKnown RBP12.29□□□□□ -0.44
CCDC38-207ENST00000549752 ZNF792Q3KQV3 632 aa12.29□□□□□ -0.44
CCDC38-207ENST00000549752 IQCA1Q86XH1 822 aa12.29□□□□□ -0.44
CCDC38-207ENST00000549752 ANKRD35Q8N283 1001 aa12.29□□□□□ -0.44
CCDC38-207ENST00000549752 DSCC1Q9BVC3 393 aa12.29□□□□□ -0.44
CCDC38-207ENST00000549752 IL17RBQ9NRM6 502 aa12.29□□□□□ -0.44
CCDC38-207ENST00000549752 COLQQ9Y215 455 aaPredicted RBP12.29□□□□□ -0.44
CCDC38-207ENST00000549752 SYNGAP1Q96PV0 1343 aa12.29□□□□□ -0.44
CCDC38-207ENST00000549752 A0A1W2PPC1 479 aa12.28□□□□□ -0.44
CCDC38-207ENST00000549752 RARBP10826 455 aa12.28□□□□□ -0.44
CCDC38-207ENST00000549752 COL6A1P12109 1028 aa12.28□□□□□ -0.44
CCDC38-207ENST00000549752 HAND2P61296 217 aa12.28□□□□□ -0.44
CCDC38-207ENST00000549752 CCDC96Q2M329 555 aa12.28□□□□□ -0.44
CCDC38-207ENST00000549752 ACAD9Q9H845 621 aa12.28□□□□□ -0.44
CCDC38-207ENST00000549752 RAVER2Q9HCJ3 691 aaKnown RBP12.28□□□□□ -0.44
CCDC38-207ENST00000549752 RAD50Q92878 1312 aa12.28□□□□□ -0.44
CCDC38-207ENST00000549752 PGK2P07205 417 aa12.27□□□□□ -0.45
CCDC38-207ENST00000549752 AKR1A1P14550 325 aa12.27□□□□□ -0.45
CCDC38-207ENST00000549752 TTC22Q5TAA0 569 aa12.27□□□□□ -0.45
CCDC38-207ENST00000549752 KCTD1Q719H9 257 aa12.27□□□□□ -0.45
CCDC38-207ENST00000549752 C7orf61Q8IZ16 206 aa12.27□□□□□ -0.45
CCDC38-207ENST00000549752 TRPV1Q8NER1 839 aa12.27□□□□□ -0.45
CCDC38-207ENST00000549752 KRT23Q9C075 422 aa12.27□□□□□ -0.45
CCDC38-207ENST00000549752 CNNM2Q9H8M5 875 aa12.27□□□□□ -0.45
CCDC38-207ENST00000549752 INCENPQ9NQS7 918 aa12.27□□□□□ -0.45
CCDC38-207ENST00000549752 RIPK3Q9Y572 518 aa12.27□□□□□ -0.45
CCDC38-207ENST00000549752 PFASO15067 1338 aa12.27□□□□□ -0.45
CCDC38-207ENST00000549752 DNAJC25-GNG10A0A024R161 153 aa12.26□□□□□ -0.45
CCDC38-207ENST00000549752 NMT2O60551 498 aa12.26□□□□□ -0.45
CCDC38-207ENST00000549752 MAMDC4Q6UXC1 1216 aa12.26□□□□□ -0.45
CCDC38-207ENST00000549752 RNF180Q86T96 592 aa12.26□□□□□ -0.45
CCDC38-207ENST00000549752 DGKHQ86XP1 1220 aa12.26□□□□□ -0.45
CCDC38-207ENST00000549752 TMEM47Q9BQJ4 181 aa12.26□□□□□ -0.45
CCDC38-207ENST00000549752 SENP6Q9GZR1 1112 aaPredicted RBP12.26□□□□□ -0.45
CCDC38-207ENST00000549752 ABHD16BQ9H3Z7 469 aa12.26□□□□□ -0.45
CCDC38-207ENST00000549752 RNF146Q9NTX7 359 aa12.26□□□□□ -0.45
CCDC38-207ENST00000549752 PRR12Q9ULL5 1215 aa12.26□□□□□ -0.45
CCDC38-207ENST00000549752 MTMR7Q9Y216 660 aa12.26□□□□□ -0.45
CCDC38-207ENST00000549752 LCTP09848 1927 aa12.26□□□□□ -0.45
CCDC38-207ENST00000549752 POTEB2H3BUK9 544 aa12.25□□□□□ -0.45
CCDC38-207ENST00000549752 GPATCH4Q5T3I0 446 aaKnown RBP12.25□□□□□ -0.45
CCDC38-207ENST00000549752 BTNL9Q6UXG8 535 aa12.25□□□□□ -0.45
CCDC38-207ENST00000549752 TRERF1Q96PN7 1200 aa12.25□□□□□ -0.45
CCDC38-207ENST00000549752 SPC25Q9HBM1 224 aa12.25□□□□□ -0.45
CCDC38-207ENST00000549752 XPNPEP3Q9NQH7 507 aa12.25□□□□□ -0.45
CCDC38-207ENST00000549752 HOMER2Q9NSB8 354 aa12.25□□□□□ -0.45
CCDC38-207ENST00000549752 PRKAG2Q9UGJ0 569 aa12.25□□□□□ -0.45
CCDC38-207ENST00000549752 FAM184BQ9ULE4 1060 aa12.25□□□□□ -0.45
CCDC38-207ENST00000549752 CCPG1Q9ULG6 757 aa12.25□□□□□ -0.45
CCDC38-207ENST00000549752 KIAA1217Q5T5P2 1943 aa12.25□□□□□ -0.45
CCDC38-207ENST00000549752 ASB14A6NK59 587 aa12.24□□□□□ -0.45
CCDC38-207ENST00000549752 LRRC37A2A6NM11 1700 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms