RNA–Protein interactions for RNA: ENST00000549612.5

ATF1-202, Transcript of activating transcription factor 1, humanhuman

TSL 5

Gene ATF1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-202ENST00000549612 FGD4Q96M96 766 aa23.05■■□□□ 1.28
ATF1-202ENST00000549612 TMEM47Q9BQJ4 181 aa23.05■■□□□ 1.28
ATF1-202ENST00000549612 ACAD9Q9H845 621 aa23.05■■□□□ 1.28
ATF1-202ENST00000549612 LAMA3Q16787 3333 aa23.05■■□□□ 1.28
ATF1-202ENST00000549612 SZT2Q5T011 3432 aa23.04■■□□□ 1.28
ATF1-202ENST00000549612 SNAI1O95863 264 aaPredicted RBP23.04■■□□□ 1.28
ATF1-202ENST00000549612 ATN1P54259 1190 aaPredicted RBP23.04■■□□□ 1.28
ATF1-202ENST00000549612 TKFCQ3LXA3 575 aa23.04■■□□□ 1.28
ATF1-202ENST00000549612 AGBL1Q96MI9 1066 aa23.04■■□□□ 1.28
ATF1-202ENST00000549612 RNF41Q9H4P4 317 aaPredicted RBP23.04■■□□□ 1.28
ATF1-202ENST00000549612 XPNPEP3Q9NQH7 507 aa23.04■■□□□ 1.28
ATF1-202ENST00000549612 HOMER2Q9NSB8 354 aa23.04■■□□□ 1.28
ATF1-202ENST00000549612 PRR12Q9ULL5 1215 aa23.04■■□□□ 1.28
ATF1-202ENST00000549612 NT5C2P49902 561 aa23.03■■□□□ 1.28
ATF1-202ENST00000549612 BTNL9Q6UXG8 535 aa23.03■■□□□ 1.28
ATF1-202ENST00000549612 RNF146Q9NTX7 359 aa23.03■■□□□ 1.28
ATF1-202ENST00000549612 PDE4AP27815 886 aa23.02■■□□□ 1.28
ATF1-202ENST00000549612 RTP1P59025 263 aa23.02■■□□□ 1.28
ATF1-202ENST00000549612 SNX17Q15036 470 aa23.02■■□□□ 1.28
ATF1-202ENST00000549612 CCDC96Q2M329 555 aa23.02■■□□□ 1.28
ATF1-202ENST00000549612 TTC14Q96N46 770 aa23.02■■□□□ 1.28
ATF1-202ENST00000549612 A1CFQ9NQ94 594 aaKnown RBP23.02■■□□□ 1.28
ATF1-202ENST00000549612 PHF24Q9UPV7 400 aa23.02■■□□□ 1.28
ATF1-202ENST00000549612 MTMR7Q9Y216 660 aa23.02■■□□□ 1.28
ATF1-202ENST00000549612 NEDD4P46934 1319 aa23.02■■□□□ 1.28
ATF1-202ENST00000549612 SMCHD1A6NHR9 2005 aa23.01■■□□□ 1.27
ATF1-202ENST00000549612 ZNF213O14771 459 aa23.01■■□□□ 1.27
ATF1-202ENST00000549612 MYCNP04198 464 aaPredicted RBP23.01■■□□□ 1.27
ATF1-202ENST00000549612 ADCYAP1R1P41586 468 aa23.01■■□□□ 1.27
ATF1-202ENST00000549612 CCDC174Q6PII3 467 aa23.01■■□□□ 1.27
ATF1-202ENST00000549612 SLC39A5Q6ZMH5 540 aa23.01■■□□□ 1.27
ATF1-202ENST00000549612 RNF180Q86T96 592 aa23.01■■□□□ 1.27
ATF1-202ENST00000549612 FAM133AQ8N9E0 248 aa23.01■■□□□ 1.27
ATF1-202ENST00000549612 ESR2Q92731 530 aa23.01■■□□□ 1.27
ATF1-202ENST00000549612 DSCC1Q9BVC3 393 aa23.01■■□□□ 1.27
ATF1-202ENST00000549612 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.01■■□□□ 1.27
ATF1-202ENST00000549612 PGK1P00558 417 aa23■■□□□ 1.27
ATF1-202ENST00000549612 SNAP25P60880 206 aa23■■□□□ 1.27
ATF1-202ENST00000549612 C1orf53Q5VUE5 145 aa23■■□□□ 1.27
ATF1-202ENST00000549612 LENG1Q96BZ8 264 aaPredicted RBP23■■□□□ 1.27
ATF1-202ENST00000549612 TRERF1Q96PN7 1200 aa23■■□□□ 1.27
ATF1-202ENST00000549612 RANBP17Q9H2T7 1088 aaKnown RBP23■■□□□ 1.27
ATF1-202ENST00000549612 ZHX1Q9UKY1 873 aaPredicted RBP23■■□□□ 1.27
ATF1-202ENST00000549612 FAM184BQ9ULE4 1060 aa23■■□□□ 1.27
ATF1-202ENST00000549612 LAMA4Q16363 1823 aa23■■□□□ 1.27
ATF1-202ENST00000549612 POTEB2H3BUK9 544 aa22.99■■□□□ 1.27
ATF1-202ENST00000549612 ADAMTS4O75173 837 aa22.99■■□□□ 1.27
ATF1-202ENST00000549612 ICAM1P05362 532 aa22.99■■□□□ 1.27
ATF1-202ENST00000549612 PDHBP11177 359 aa22.99■■□□□ 1.27
ATF1-202ENST00000549612 ALAS1P13196 640 aa22.99■■□□□ 1.27
ATF1-202ENST00000549612 CNTN2Q02246 1040 aa22.99■■□□□ 1.27
ATF1-202ENST00000549612 ACVR2BQ13705 512 aa22.99■■□□□ 1.27
ATF1-202ENST00000549612 TTC22Q5TAA0 569 aa22.99■■□□□ 1.27
ATF1-202ENST00000549612 TTBK2Q6IQ55 1244 aa22.99■■□□□ 1.27
ATF1-202ENST00000549612 ARMCX2Q7L311 632 aa22.99■■□□□ 1.27
ATF1-202ENST00000549612 ABHD16BQ9H3Z7 469 aa22.99■■□□□ 1.27
ATF1-202ENST00000549612 SNHG28P0DPA3 235 aa22.98■■□□□ 1.27
ATF1-202ENST00000549612 GSPT1P15170 499 aaKnown RBP22.98■■□□□ 1.27
ATF1-202ENST00000549612 SLC16A2P36021 539 aa22.98■■□□□ 1.27
ATF1-202ENST00000549612 IRX6P78412 446 aaPredicted RBP22.98■■□□□ 1.27
ATF1-202ENST00000549612 SYDE2Q5VT97 1194 aa22.98■■□□□ 1.27
ATF1-202ENST00000549612 FERMT2Q96AC1 680 aa22.98■■□□□ 1.27
ATF1-202ENST00000549612 UBE2OQ9C0C9 1292 aaKnown RBP22.98■■□□□ 1.27
ATF1-202ENST00000549612 CCPG1Q9ULG6 757 aa22.98■■□□□ 1.27
ATF1-202ENST00000549612 ATP11BQ9Y2G3 1177 aa22.98■■□□□ 1.27
ATF1-202ENST00000549612 SYNRGQ9UMZ2 1314 aa22.98■■□□□ 1.27
ATF1-202ENST00000549612 SOX1O00570 391 aaPredicted RBP22.97■■□□□ 1.27
ATF1-202ENST00000549612 DUSP11O75319 330 aaKnown RBP22.97■■□□□ 1.27
ATF1-202ENST00000549612 MUM1L1Q5H9M0 696 aa22.97■■□□□ 1.27
ATF1-202ENST00000549612 DGKHQ86XP1 1220 aa22.97■■□□□ 1.27
ATF1-202ENST00000549612 CCDC144CPQ8IYA2 1237 aa22.97■■□□□ 1.27
ATF1-202ENST00000549612 TDHQ8IZJ6 230 aa22.97■■□□□ 1.27
ATF1-202ENST00000549612 TSEN34Q9BSV6 310 aaKnown RBP22.97■■□□□ 1.27
ATF1-202ENST00000549612 KATNBL1Q9H079 304 aa22.97■■□□□ 1.27
ATF1-202ENST00000549612 CTNNA3Q9UI47 895 aa22.97■■□□□ 1.27
ATF1-202ENST00000549612 FRMPD2Q68DX3 1309 aaPredicted RBP22.97■■□□□ 1.27
ATF1-202ENST00000549612 SOWAHBA6NEL2 793 aa22.96■■□□□ 1.27
ATF1-202ENST00000549612 MDM2Q00987 491 aaPredicted RBP22.96■■□□□ 1.27
ATF1-202ENST00000549612 ZNF543Q08ER8 600 aa22.96■■□□□ 1.27
ATF1-202ENST00000549612 TRIM60Q495X7 471 aa22.96■■□□□ 1.27
ATF1-202ENST00000549612 CCDC178Q5BJE1 867 aa22.96■■□□□ 1.27
ATF1-202ENST00000549612 IL25Q9H293 177 aa22.96■■□□□ 1.27
ATF1-202ENST00000549612 GPCPD1Q9NPB8 672 aa22.96■■□□□ 1.27
ATF1-202ENST00000549612 CYP39A1Q9NYL5 469 aa22.96■■□□□ 1.27
ATF1-202ENST00000549612 A0A1W2PQ45 241 aaPredicted RBP22.95■■□□□ 1.26
ATF1-202ENST00000549612 A0A1W2PQY0 241 aa22.95■■□□□ 1.26
ATF1-202ENST00000549612 ADCY6O43306 1168 aa22.95■■□□□ 1.26
ATF1-202ENST00000549612 KDM4AO75164 1064 aa22.95■■□□□ 1.26
ATF1-202ENST00000549612 CST5P28325 142 aaPredicted RBP22.95■■□□□ 1.26
ATF1-202ENST00000549612 IMMTQ16891 758 aaKnown RBP22.95■■□□□ 1.26
ATF1-202ENST00000549612 CCDC144BQ3MJ40 725 aa22.95■■□□□ 1.26
ATF1-202ENST00000549612 KLHDC9Q8NEP7 349 aa22.95■■□□□ 1.26
ATF1-202ENST00000549612 RAD50Q92878 1312 aa22.95■■□□□ 1.26
ATF1-202ENST00000549612 ZKSCAN3Q9BRR0 538 aa22.95■■□□□ 1.26
ATF1-202ENST00000549612 PRKAG2Q9UGJ0 569 aa22.95■■□□□ 1.26
ATF1-202ENST00000549612 MCM3APO60318 1980 aa22.94■■□□□ 1.26
ATF1-202ENST00000549612 ASTN1O14525 1302 aa22.94■■□□□ 1.26
ATF1-202ENST00000549612 ASB14A6NK59 587 aa22.94■■□□□ 1.26
ATF1-202ENST00000549612 LRIT3Q3SXY7 679 aa22.94■■□□□ 1.26
ATF1-202ENST00000549612 CCSAPQ6IQ19 270 aaPredicted RBP22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms