RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 KLF4O43474 513 aa6.25□□□□□ -1.41
SNRPF-202ENST00000549580 CHRNEQ04844 493 aa6.25□□□□□ -1.41
SNRPF-202ENST00000549580 BNC2Q6ZN30 1099 aaPredicted RBP6.25□□□□□ -1.41
SNRPF-202ENST00000549580 LINC01356Q8N9X3 169 aa6.25□□□□□ -1.41
SNRPF-202ENST00000549580 TP53I13Q8NBR0 393 aaPredicted RBP6.25□□□□□ -1.41
SNRPF-202ENST00000549580 GATAD2BQ8WXI9 593 aa6.25□□□□□ -1.41
SNRPF-202ENST00000549580 MKL1Q969V6 931 aa6.25□□□□□ -1.41
SNRPF-202ENST00000549580 SYTL4Q96C24 671 aaPredicted RBP6.25□□□□□ -1.41
SNRPF-202ENST00000549580 KCNH3Q9ULD8 1083 aa6.25□□□□□ -1.41
SNRPF-202ENST00000549580 TMA7Q9Y2S6 64 aaKnown RBP6.25□□□□□ -1.41
SNRPF-202ENST00000549580 TBX22Q9Y458 520 aa6.25□□□□□ -1.41
SNRPF-202ENST00000549580 MATN3O15232 486 aa6.24□□□□□ -1.41
SNRPF-202ENST00000549580 KIR3DS1Q14943 382 aa6.24□□□□□ -1.41
SNRPF-202ENST00000549580 FAM129CQ86XR2 697 aa6.24□□□□□ -1.41
SNRPF-202ENST00000549580 FBXO27Q8NI29 283 aa6.24□□□□□ -1.41
SNRPF-202ENST00000549580 JARID2Q92833 1246 aaPredicted RBP6.24□□□□□ -1.41
SNRPF-202ENST00000549580 SHDQ96IW2 340 aa6.24□□□□□ -1.41
SNRPF-202ENST00000549580 SRRTQ9BXP5 876 aaKnown RBP6.24□□□□□ -1.41
SNRPF-202ENST00000549580 MIR1-1HGQ9H1L0 117 aa6.24□□□□□ -1.41
SNRPF-202ENST00000549580 ZNF281Q9Y2X9 895 aa6.24□□□□□ -1.41
SNRPF-202ENST00000549580 TACC3Q9Y6A5 838 aa6.24□□□□□ -1.41
SNRPF-202ENST00000549580 LMNB1P20700 586 aa6.23□□□□□ -1.41
SNRPF-202ENST00000549580 RPL10P27635 214 aaKnown RBP6.23□□□□□ -1.41
SNRPF-202ENST00000549580 CDR1P51861 262 aa6.23□□□□□ -1.41
SNRPF-202ENST00000549580 DUSP4Q13115 394 aa6.23□□□□□ -1.41
SNRPF-202ENST00000549580 MPP2Q14168 576 aa6.23□□□□□ -1.41
SNRPF-202ENST00000549580 NFE2L2Q16236 605 aa6.23□□□□□ -1.41
SNRPF-202ENST00000549580 SEZ6Q53EL9 994 aa6.23□□□□□ -1.41
SNRPF-202ENST00000549580 ANKS3Q6ZW76 656 aa6.23□□□□□ -1.41
SNRPF-202ENST00000549580 SLC16A11Q8NCK7 471 aa6.23□□□□□ -1.41
SNRPF-202ENST00000549580 FAM13CQ8NE31 585 aa6.23□□□□□ -1.41
SNRPF-202ENST00000549580 CYB5D2Q8WUJ1 264 aa6.23□□□□□ -1.41
SNRPF-202ENST00000549580 SIRPGQ9P1W8 387 aa6.23□□□□□ -1.41
SNRPF-202ENST00000549580 PRKAG3Q9UGI9 489 aa6.23□□□□□ -1.41
SNRPF-202ENST00000549580 MRVI1Q9Y6F6 885 aa6.23□□□□□ -1.41
SNRPF-202ENST00000549580 TLR3O15455 904 aaKnown RBP6.22□□□□□ -1.41
SNRPF-202ENST00000549580 HMGB1P09429 215 aaKnown RBP6.22□□□□□ -1.41
SNRPF-202ENST00000549580 HSP90B1P14625 803 aaKnown RBP6.22□□□□□ -1.41
SNRPF-202ENST00000549580 BMS1Q14692 1282 aaKnown RBP6.22□□□□□ -1.41
SNRPF-202ENST00000549580 CWF19L2Q2TBE0 894 aaKnown RBP6.22□□□□□ -1.41
SNRPF-202ENST00000549580 CNKSR3Q6P9H4 555 aa6.22□□□□□ -1.41
SNRPF-202ENST00000549580 ZPBP2Q6X784 338 aa6.22□□□□□ -1.41
SNRPF-202ENST00000549580 REXO1Q8N1G1 1221 aaKnown RBP6.22□□□□□ -1.41
SNRPF-202ENST00000549580 RNF141Q8WVD5 230 aa6.22□□□□□ -1.41
SNRPF-202ENST00000549580 CPLX3Q8WVH0 158 aa6.22□□□□□ -1.41
SNRPF-202ENST00000549580 SRRDQ9UH36 339 aa6.22□□□□□ -1.41
SNRPF-202ENST00000549580 PPT2Q9UMR5 302 aa6.22□□□□□ -1.41
SNRPF-202ENST00000549580 CDK11AQ9UQ88 783 aaPredicted RBP6.22□□□□□ -1.41
SNRPF-202ENST00000549580 K7ESM1 405 aa6.21□□□□□ -1.42
SNRPF-202ENST00000549580 PLCG1P19174 1290 aa6.21□□□□□ -1.42
SNRPF-202ENST00000549580 GIPRP48546 466 aa6.21□□□□□ -1.42
SNRPF-202ENST00000549580 ZNF165P49910 485 aa6.21□□□□□ -1.42
SNRPF-202ENST00000549580 PDE4BQ07343 736 aa6.21□□□□□ -1.42
SNRPF-202ENST00000549580 RAB33AQ14088 237 aa6.21□□□□□ -1.42
SNRPF-202ENST00000549580 ZFYVE27Q5T4F4 411 aa6.21□□□□□ -1.42
SNRPF-202ENST00000549580 REC114Q7Z4M0 266 aa6.21□□□□□ -1.42
SNRPF-202ENST00000549580 ANAPC16Q96DE5 110 aa6.21□□□□□ -1.42
SNRPF-202ENST00000549580 SORCS2Q96PQ0 1159 aa6.21□□□□□ -1.42
SNRPF-202ENST00000549580 PLCD4Q9BRC7 762 aa6.21□□□□□ -1.42
SNRPF-202ENST00000549580 ZMYM5Q9UJ78 669 aa6.21□□□□□ -1.42
SNRPF-202ENST00000549580 ADAM30Q9UKF2 790 aa6.21□□□□□ -1.42
SNRPF-202ENST00000549580 NCKAP1LP55160 1127 aa6.2□□□□□ -1.42
SNRPF-202ENST00000549580 EIF6P56537 245 aaKnown RBP6.2□□□□□ -1.42
SNRPF-202ENST00000549580 TNNI3KQ59H18 835 aa6.2□□□□□ -1.42
SNRPF-202ENST00000549580 SDE2Q6IQ49 451 aa6.2□□□□□ -1.42
SNRPF-202ENST00000549580 CCDC81Q6ZN84 652 aa6.2□□□□□ -1.42
SNRPF-202ENST00000549580 CEP128Q6ZU80 1094 aa6.2□□□□□ -1.42
SNRPF-202ENST00000549580 LRP10Q7Z4F1 713 aa6.2□□□□□ -1.42
SNRPF-202ENST00000549580 WAPLQ7Z5K2 1190 aa6.2□□□□□ -1.42
SNRPF-202ENST00000549580 IGDCC3Q8IVU1 814 aa6.2□□□□□ -1.42
SNRPF-202ENST00000549580 NLGN1Q8N2Q7 840 aa6.2□□□□□ -1.42
SNRPF-202ENST00000549580 USHBP1Q8N6Y0 703 aa6.2□□□□□ -1.42
SNRPF-202ENST00000549580 RBBP8NLQ8NC74 664 aaPredicted RBP6.2□□□□□ -1.42
SNRPF-202ENST00000549580 OR6P1Q8NGX9 317 aa6.2□□□□□ -1.42
SNRPF-202ENST00000549580 MZB1Q8WU39 189 aa6.2□□□□□ -1.42
SNRPF-202ENST00000549580 HNRNPLLQ8WVV9 542 aaKnown RBP6.2□□□□□ -1.42
SNRPF-202ENST00000549580 VWCEQ96DN2 955 aa6.2□□□□□ -1.42
SNRPF-202ENST00000549580 MRFAP1L1Q96HT8 127 aa6.2□□□□□ -1.42
SNRPF-202ENST00000549580 KREMEN1Q96MU8 473 aa6.2□□□□□ -1.42
SNRPF-202ENST00000549580 FOXP3Q9BZS1 431 aa6.2□□□□□ -1.42
SNRPF-202ENST00000549580 EHMT1Q9H9B1 1298 aa6.2□□□□□ -1.42
SNRPF-202ENST00000549580 BRMS1Q9HCU9 246 aa6.2□□□□□ -1.42
SNRPF-202ENST00000549580 PALD1Q9ULE6 856 aa6.2□□□□□ -1.42
SNRPF-202ENST00000549580 ZNRF3Q9ULT6 936 aa6.2□□□□□ -1.42
SNRPF-202ENST00000549580 SMAD7O15105 426 aaKnown RBP6.19□□□□□ -1.42
SNRPF-202ENST00000549580 NRDCO43847 1150 aa6.19□□□□□ -1.42
SNRPF-202ENST00000549580 ATE1O95260 518 aa6.19□□□□□ -1.42
SNRPF-202ENST00000549580 IMPDH2P12268 514 aa6.19□□□□□ -1.42
SNRPF-202ENST00000549580 MAGEA10P43363 369 aaPredicted RBP6.19□□□□□ -1.42
SNRPF-202ENST00000549580 RPL6Q02878 288 aaKnown RBP6.19□□□□□ -1.42
SNRPF-202ENST00000549580 CLCQ05315 142 aa6.19□□□□□ -1.42
SNRPF-202ENST00000549580 SLC14A2Q15849 920 aa6.19□□□□□ -1.42
SNRPF-202ENST00000549580 ZNF827Q17R98 1081 aa6.19□□□□□ -1.42
SNRPF-202ENST00000549580 CLEC16AQ2KHT3 1053 aa6.19□□□□□ -1.42
SNRPF-202ENST00000549580 DIEXFQ68CQ4 756 aaKnown RBP6.19□□□□□ -1.42
SNRPF-202ENST00000549580 JAZF1Q86VZ6 243 aa6.19□□□□□ -1.42
SNRPF-202ENST00000549580 FAM169BQ8N8A8 192 aa6.19□□□□□ -1.42
SNRPF-202ENST00000549580 PWWP2AQ96N64 755 aa6.19□□□□□ -1.42
SNRPF-202ENST00000549580 CHURC1-FNTBB4DL54 471 aa6.18□□□□□ -1.42
SNRPF-202ENST00000549580 MCM4P33991 863 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms