RNA–Protein interactions for RNA: ENST00000549554.1

TUBA1C-205, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-205ENST00000549554 CCDC174Q6PII3 467 aa23.27■■□□□ 1.32
TUBA1C-205ENST00000549554 UBE2Q1Q7Z7E8 422 aa23.27■■□□□ 1.32
TUBA1C-205ENST00000549554 ANKRD35Q8N283 1001 aa23.27■■□□□ 1.32
TUBA1C-205ENST00000549554 HOMER2Q9NSB8 354 aa23.27■■□□□ 1.32
TUBA1C-205ENST00000549554 PNMA2Q9UL42 364 aa23.27■■□□□ 1.32
TUBA1C-205ENST00000549554 OGDHLQ9ULD0 1010 aa23.27■■□□□ 1.32
TUBA1C-205ENST00000549554 RBM8AQ9Y5S9 174 aaKnown RBP23.27■■□□□ 1.32
TUBA1C-205ENST00000549554 MYH6P13533 1939 aa23.26■■□□□ 1.31
TUBA1C-205ENST00000549554 IGHA2P01877 340 aa23.26■■□□□ 1.31
TUBA1C-205ENST00000549554 CYBAP13498 195 aa23.26■■□□□ 1.31
TUBA1C-205ENST00000549554 SLC16A2P36021 539 aa23.26■■□□□ 1.31
TUBA1C-205ENST00000549554 IFIT1BQ5T764 474 aaKnown RBP23.26■■□□□ 1.31
TUBA1C-205ENST00000549554 PRPF38BQ5VTL8 546 aaKnown RBP23.26■■□□□ 1.31
TUBA1C-205ENST00000549554 TTBK2Q6IQ55 1244 aa23.26■■□□□ 1.31
TUBA1C-205ENST00000549554 NCOA7Q8NI08 942 aa23.26■■□□□ 1.31
TUBA1C-205ENST00000549554 RANBP17Q9H2T7 1088 aaKnown RBP23.26■■□□□ 1.31
TUBA1C-205ENST00000549554 RNF146Q9NTX7 359 aa23.26■■□□□ 1.31
TUBA1C-205ENST00000549554 ZNF536O15090 1300 aa23.26■■□□□ 1.31
TUBA1C-205ENST00000549554 ERICH2A1L162 156 aa23.25■■□□□ 1.31
TUBA1C-205ENST00000549554 E7EWF7 191 aa23.25■■□□□ 1.31
TUBA1C-205ENST00000549554 CDC45O75419 566 aa23.25■■□□□ 1.31
TUBA1C-205ENST00000549554 ALAS1P13196 640 aa23.25■■□□□ 1.31
TUBA1C-205ENST00000549554 SART3Q15020 963 aaKnown RBP23.25■■□□□ 1.31
TUBA1C-205ENST00000549554 NECAB2Q7Z6G3 386 aa23.25■■□□□ 1.31
TUBA1C-205ENST00000549554 MSL3Q8N5Y2 521 aaKnown RBP23.25■■□□□ 1.31
TUBA1C-205ENST00000549554 AGBL1Q96MI9 1066 aa23.25■■□□□ 1.31
TUBA1C-205ENST00000549554 ANO2Q9NQ90 1003 aa23.25■■□□□ 1.31
TUBA1C-205ENST00000549554 DDX20Q9UHI6 824 aaKnown RBP23.25■■□□□ 1.31
TUBA1C-205ENST00000549554 NRBP1Q9UHY1 535 aa23.25■■□□□ 1.31
TUBA1C-205ENST00000549554 CCPG1Q9ULG6 757 aa23.25■■□□□ 1.31
TUBA1C-205ENST00000549554 DNAJC25-GNG10A0A024R161 153 aa23.24■■□□□ 1.31
TUBA1C-205ENST00000549554 ICAM1P05362 532 aa23.24■■□□□ 1.31
TUBA1C-205ENST00000549554 ASPRV1Q53RT3 343 aa23.24■■□□□ 1.31
TUBA1C-205ENST00000549554 ERICH6BQ5W0A0 696 aa23.24■■□□□ 1.31
TUBA1C-205ENST00000549554 TRERF1Q96PN7 1200 aa23.24■■□□□ 1.31
TUBA1C-205ENST00000549554 TINF2Q9BSI4 451 aa23.24■■□□□ 1.31
TUBA1C-205ENST00000549554 LSG1Q9H089 658 aaKnown RBP23.24■■□□□ 1.31
TUBA1C-205ENST00000549554 SNAP25P60880 206 aa23.23■■□□□ 1.31
TUBA1C-205ENST00000549554 CYB5R4Q7L1T6 521 aa23.23■■□□□ 1.31
TUBA1C-205ENST00000549554 ZNF467Q7Z7K2 595 aaPredicted RBP23.23■■□□□ 1.31
TUBA1C-205ENST00000549554 PFASO15067 1338 aa23.23■■□□□ 1.31
TUBA1C-205ENST00000549554 MCM3APO60318 1980 aa23.22■■□□□ 1.31
TUBA1C-205ENST00000549554 SMCHD1A6NHR9 2005 aa23.22■■□□□ 1.31
TUBA1C-205ENST00000549554 SEPT4O43236 478 aa23.22■■□□□ 1.31
TUBA1C-205ENST00000549554 LHX8Q68G74 356 aa23.22■■□□□ 1.31
TUBA1C-205ENST00000549554 TRPV1Q8NER1 839 aa23.22■■□□□ 1.31
TUBA1C-205ENST00000549554 PAWRQ96IZ0 340 aaKnown RBP23.22■■□□□ 1.31
TUBA1C-205ENST00000549554 CNPY2Q9Y2B0 182 aa23.22■■□□□ 1.31
TUBA1C-205ENST00000549554 IFIT3O14879 490 aaKnown RBP23.21■■□□□ 1.31
TUBA1C-205ENST00000549554 PARP1P09874 1014 aaKnown RBP23.21■■□□□ 1.31
TUBA1C-205ENST00000549554 SEC23AQ15436 765 aa23.21■■□□□ 1.31
TUBA1C-205ENST00000549554 DPF3Q92784 378 aa23.21■■□□□ 1.31
TUBA1C-205ENST00000549554 A1CFQ9NQ94 594 aaKnown RBP23.21■■□□□ 1.31
TUBA1C-205ENST00000549554 SYNGAP1Q96PV0 1343 aa23.21■■□□□ 1.31
TUBA1C-205ENST00000549554 MKI67P46013 3256 aaKnown RBP23.21■■□□□ 1.31
TUBA1C-205ENST00000549554 WDR19Q8NEZ3 1342 aa23.2■■□□□ 1.3
TUBA1C-205ENST00000549554 POTEB2H3BUK9 544 aa23.2■■□□□ 1.3
TUBA1C-205ENST00000549554 GOLGA8HP0CJ92 632 aa23.2■■□□□ 1.3
TUBA1C-205ENST00000549554 RNF20Q5VTR2 975 aa23.2■■□□□ 1.3
TUBA1C-205ENST00000549554 PPP4R2Q9NY27 417 aa23.2■■□□□ 1.3
TUBA1C-205ENST00000549554 WTAPQ15007 396 aa23.19■■□□□ 1.3
TUBA1C-205ENST00000549554 PRAMEF19Q5SWL8 479 aa23.19■■□□□ 1.3
TUBA1C-205ENST00000549554 MAMDC4Q6UXC1 1216 aa23.19■■□□□ 1.3
TUBA1C-205ENST00000549554 STOX1Q6ZVD7 989 aa23.19■■□□□ 1.3
TUBA1C-205ENST00000549554 DIS3LQ8TF46 1054 aaKnown RBP23.19■■□□□ 1.3
TUBA1C-205ENST00000549554 C11orf49Q9H6J7 331 aa23.19■■□□□ 1.3
TUBA1C-205ENST00000549554 TAF6LQ9Y6J9 622 aa23.19■■□□□ 1.3
TUBA1C-205ENST00000549554 ALPK3Q96L96 1907 aa23.18■■□□□ 1.3
TUBA1C-205ENST00000549554 SLC27A2O14975 620 aa23.18■■□□□ 1.3
TUBA1C-205ENST00000549554 DHX16O60231 1041 aaKnown RBP23.18■■□□□ 1.3
TUBA1C-205ENST00000549554 MB21D2Q8IYB1 491 aaPredicted RBP23.18■■□□□ 1.3
TUBA1C-205ENST00000549554 UBA5Q9GZZ9 404 aa23.18■■□□□ 1.3
TUBA1C-205ENST00000549554 NECTIN1Q15223 517 aa23.17■■□□□ 1.3
TUBA1C-205ENST00000549554 MUM1L1Q5H9M0 696 aa23.17■■□□□ 1.3
TUBA1C-205ENST00000549554 TMEM67Q5HYA8 995 aa23.17■■□□□ 1.3
TUBA1C-205ENST00000549554 CREB3L3Q68CJ9 461 aa23.17■■□□□ 1.3
TUBA1C-205ENST00000549554 NSMFQ6X4W1 530 aa23.17■■□□□ 1.3
TUBA1C-205ENST00000549554 FAM133AQ8N9E0 248 aa23.17■■□□□ 1.3
TUBA1C-205ENST00000549554 ARRDC4Q8NCT1 418 aa23.17■■□□□ 1.3
TUBA1C-205ENST00000549554 MTA3Q9BTC8 594 aa23.17■■□□□ 1.3
TUBA1C-205ENST00000549554 LCTP09848 1927 aa23.16■■□□□ 1.3
TUBA1C-205ENST00000549554 AKR1A1P14550 325 aa23.16■■□□□ 1.3
TUBA1C-205ENST00000549554 MNX1P50219 401 aaPredicted RBP23.16■■□□□ 1.3
TUBA1C-205ENST00000549554 CYP39A1Q9NYL5 469 aa23.16■■□□□ 1.3
TUBA1C-205ENST00000549554 NR2E3Q9Y5X4 410 aa23.16■■□□□ 1.3
TUBA1C-205ENST00000549554 ASB14A6NK59 587 aa23.15■■□□□ 1.3
TUBA1C-205ENST00000549554 DNM1LO00429 736 aa23.15■■□□□ 1.3
TUBA1C-205ENST00000549554 RARBP10826 455 aa23.15■■□□□ 1.3
TUBA1C-205ENST00000549554 MCM5P33992 734 aa23.15■■□□□ 1.3
TUBA1C-205ENST00000549554 CDC37Q16543 378 aaPredicted RBP23.15■■□□□ 1.3
TUBA1C-205ENST00000549554 CHST3Q7LGC8 479 aa23.15■■□□□ 1.3
TUBA1C-205ENST00000549554 ADGRF4Q8IZF3 695 aa23.15■■□□□ 1.3
TUBA1C-205ENST00000549554 ABHD16BQ9H3Z7 469 aa23.15■■□□□ 1.3
TUBA1C-205ENST00000549554 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.15■■□□□ 1.3
TUBA1C-205ENST00000549554 ZHX1Q9UKY1 873 aaPredicted RBP23.15■■□□□ 1.3
TUBA1C-205ENST00000549554 KBTBD13C9JR72 458 aa23.14■■□□□ 1.29
TUBA1C-205ENST00000549554 EVI5O60447 810 aa23.14■■□□□ 1.29
TUBA1C-205ENST00000549554 ZNF865P0CJ78 1059 aaPredicted RBP23.14■■□□□ 1.29
TUBA1C-205ENST00000549554 CNTN2Q02246 1040 aa23.14■■□□□ 1.29
TUBA1C-205ENST00000549554 ANO1Q5XXA6 986 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms