RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 ZNFX1Q9P2E3 1918 aaKnown RBP13.02□□□□□ -0.32
TRAFD1-206ENST00000549358 ERC2O15083 957 aa13.02□□□□□ -0.33
TRAFD1-206ENST00000549358 BEX3Q00994 111 aa13.02□□□□□ -0.33
TRAFD1-206ENST00000549358 ZNF467Q7Z7K2 595 aaPredicted RBP13.02□□□□□ -0.33
TRAFD1-206ENST00000549358 AACSQ86V21 672 aa13.02□□□□□ -0.33
TRAFD1-206ENST00000549358 CPXCR1Q8N123 301 aa13.02□□□□□ -0.33
TRAFD1-206ENST00000549358 NUP88Q99567 741 aaPredicted RBP13.02□□□□□ -0.33
TRAFD1-206ENST00000549358 ABHD16BQ9H3Z7 469 aa13.02□□□□□ -0.33
TRAFD1-206ENST00000549358 PCDHA11Q9Y5I1 949 aa13.02□□□□□ -0.33
TRAFD1-206ENST00000549358 CHD7Q9P2D1 2997 aa13.01□□□□□ -0.33
TRAFD1-206ENST00000549358 TCRBV5S4A2TA0A5A2 114 aa13.01□□□□□ -0.33
TRAFD1-206ENST00000549358 ZBBXA8MT70 800 aa13.01□□□□□ -0.33
TRAFD1-206ENST00000549358 CTAGE5O15320 804 aa13.01□□□□□ -0.33
TRAFD1-206ENST00000549358 TMEM31Q5JXX7 168 aa13.01□□□□□ -0.33
TRAFD1-206ENST00000549358 C12orf60Q5U649 245 aa13.01□□□□□ -0.33
TRAFD1-206ENST00000549358 CXCL17Q6UXB2 119 aa13.01□□□□□ -0.33
TRAFD1-206ENST00000549358 NOL8Q76FK4 1167 aaKnown RBP13.01□□□□□ -0.33
TRAFD1-206ENST00000549358 ANKRD35Q8N283 1001 aa13.01□□□□□ -0.33
TRAFD1-206ENST00000549358 SLF1Q9BQI6 1058 aa13.01□□□□□ -0.33
TRAFD1-206ENST00000549358 CERS4Q9HA82 394 aa13.01□□□□□ -0.33
TRAFD1-206ENST00000549358 ATP8A2Q9NTI2 1148 aa13.01□□□□□ -0.33
TRAFD1-206ENST00000549358 FARP1Q9Y4F1 1045 aaPredicted RBP13.01□□□□□ -0.33
TRAFD1-206ENST00000549358 MTCH2Q9Y6C9 303 aa13.01□□□□□ -0.33
TRAFD1-206ENST00000549358 NAV1Q8NEY1 1877 aa13.01□□□□□ -0.33
TRAFD1-206ENST00000549358 BDP1A6H8Y1 2624 aa13□□□□□ -0.33
TRAFD1-206ENST00000549358 COL11A1P12107 1806 aaPredicted RBP13□□□□□ -0.33
TRAFD1-206ENST00000549358 USP17L12C9JPN9 530 aa13□□□□□ -0.33
TRAFD1-206ENST00000549358 USP17L21D6R901 530 aa13□□□□□ -0.33
TRAFD1-206ENST00000549358 GOLIM4O00461 696 aa13□□□□□ -0.33
TRAFD1-206ENST00000549358 ITGA7Q13683 1181 aa13□□□□□ -0.33
TRAFD1-206ENST00000549358 SLFNL1Q499Z3 407 aa13□□□□□ -0.33
TRAFD1-206ENST00000549358 ARMCX2Q7L311 632 aa13□□□□□ -0.33
TRAFD1-206ENST00000549358 RPUSD2Q8IZ73 545 aaKnown RBP13□□□□□ -0.33
TRAFD1-206ENST00000549358 PRPF38AQ8NAV1 312 aaKnown RBP13□□□□□ -0.33
TRAFD1-206ENST00000549358 SLC43A3Q8NBI5 491 aa13□□□□□ -0.33
TRAFD1-206ENST00000549358 DNAJC2Q99543 621 aaKnown RBP13□□□□□ -0.33
TRAFD1-206ENST00000549358 TRPV6Q9H1D0 765 aa13□□□□□ -0.33
TRAFD1-206ENST00000549358 GRIN2DO15399 1336 aa12.99□□□□□ -0.33
TRAFD1-206ENST00000549358 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.99□□□□□ -0.33
TRAFD1-206ENST00000549358 ZNF316A6NFI3 1004 aaPredicted RBP12.99□□□□□ -0.33
TRAFD1-206ENST00000549358 GTPBP6O43824 516 aaPredicted RBP12.99□□□□□ -0.33
TRAFD1-206ENST00000549358 TLL1O43897 1013 aa12.99□□□□□ -0.33
TRAFD1-206ENST00000549358 ZBED4O75132 1171 aa12.99□□□□□ -0.33
TRAFD1-206ENST00000549358 MBD4O95243 580 aa12.99□□□□□ -0.33
TRAFD1-206ENST00000549358 ATP2A2P16615 1042 aaKnown RBP12.99□□□□□ -0.33
TRAFD1-206ENST00000549358 TNFAIP2Q03169 654 aa12.99□□□□□ -0.33
TRAFD1-206ENST00000549358 C16orf86Q6ZW13 317 aa12.99□□□□□ -0.33
TRAFD1-206ENST00000549358 AMOTL1Q8IY63 956 aa12.99□□□□□ -0.33
TRAFD1-206ENST00000549358 CCDC144CPQ8IYA2 1237 aa12.99□□□□□ -0.33
TRAFD1-206ENST00000549358 SCLYQ96I15 445 aa12.99□□□□□ -0.33
TRAFD1-206ENST00000549358 FGD4Q96M96 766 aa12.99□□□□□ -0.33
TRAFD1-206ENST00000549358 NOC4LQ9BVI4 516 aaKnown RBP12.99□□□□□ -0.33
TRAFD1-206ENST00000549358 WNT8AQ9H1J5 351 aa12.99□□□□□ -0.33
TRAFD1-206ENST00000549358 RAVER2Q9HCJ3 691 aaKnown RBP12.99□□□□□ -0.33
TRAFD1-206ENST00000549358 IL1RAPL2Q9NP60 686 aa12.99□□□□□ -0.33
TRAFD1-206ENST00000549358 EXOC6BQ9Y2D4 811 aa12.99□□□□□ -0.33
TRAFD1-206ENST00000549358 CTDP1Q9Y5B0 961 aaPredicted RBP12.99□□□□□ -0.33
TRAFD1-206ENST00000549358 PARP14Q460N5 1801 aa12.99□□□□□ -0.33
TRAFD1-206ENST00000549358 TCF20Q9UGU0 1960 aaKnown RBP12.98□□□□□ -0.33
TRAFD1-206ENST00000549358 F5H6K3 240 aa12.98□□□□□ -0.33
TRAFD1-206ENST00000549358 ATP2A1O14983 1001 aa12.98□□□□□ -0.33
TRAFD1-206ENST00000549358 B4GALT4O60513 344 aa12.98□□□□□ -0.33
TRAFD1-206ENST00000549358 CABYRO75952 493 aa12.98□□□□□ -0.33
TRAFD1-206ENST00000549358 CA3P07451 260 aa12.98□□□□□ -0.33
TRAFD1-206ENST00000549358 POU3F3P20264 500 aaPredicted RBP12.98□□□□□ -0.33
TRAFD1-206ENST00000549358 NKX3-2P78367 333 aa12.98□□□□□ -0.33
TRAFD1-206ENST00000549358 KLRC3Q07444 240 aa12.98□□□□□ -0.33
TRAFD1-206ENST00000549358 TMEM67Q5HYA8 995 aa12.98□□□□□ -0.33
TRAFD1-206ENST00000549358 KRT40Q6A162 431 aa12.98□□□□□ -0.33
TRAFD1-206ENST00000549358 KHSRPQ92945 711 aaKnown RBP eCLIP12.98□□□□□ -0.33
TRAFD1-206ENST00000549358 KIFC2Q96AC6 838 aa12.98□□□□□ -0.33
TRAFD1-206ENST00000549358 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.98□□□□□ -0.33
TRAFD1-206ENST00000549358 KATNBL1Q9H079 304 aa12.98□□□□□ -0.33
TRAFD1-206ENST00000549358 BCL11AQ9H165 835 aa12.98□□□□□ -0.33
TRAFD1-206ENST00000549358 COG5Q9UP83 839 aa12.98□□□□□ -0.33
TRAFD1-206ENST00000549358 ASTN1O14525 1302 aa12.97□□□□□ -0.33
TRAFD1-206ENST00000549358 FAM86C2PA6NEL3 165 aa12.97□□□□□ -0.33
TRAFD1-206ENST00000549358 DYNC1LI2O43237 492 aaPredicted RBP12.97□□□□□ -0.33
TRAFD1-206ENST00000549358 GPR37L1O60883 481 aa12.97□□□□□ -0.33
TRAFD1-206ENST00000549358 GABBR2O75899 941 aa12.97□□□□□ -0.33
TRAFD1-206ENST00000549358 PTGS1P23219 599 aa12.97□□□□□ -0.33
TRAFD1-206ENST00000549358 PSMC6P62333 389 aa12.97□□□□□ -0.33
TRAFD1-206ENST00000549358 TTLL4Q14679 1199 aa12.97□□□□□ -0.33
TRAFD1-206ENST00000549358 FSCN1Q16658 493 aaKnown RBP12.97□□□□□ -0.33
TRAFD1-206ENST00000549358 ZKSCAN2Q63HK3 967 aa12.97□□□□□ -0.33
TRAFD1-206ENST00000549358 TLK2Q86UE8 772 aa12.97□□□□□ -0.33
TRAFD1-206ENST00000549358 ERC1Q8IUD2 1116 aa12.97□□□□□ -0.33
TRAFD1-206ENST00000549358 HLA-CQ95604 372 aa12.97□□□□□ -0.33
TRAFD1-206ENST00000549358 VWCEQ96DN2 955 aa12.97□□□□□ -0.33
TRAFD1-206ENST00000549358 DDRGK1Q96HY6 314 aa12.97□□□□□ -0.33
TRAFD1-206ENST00000549358 AP5M1Q9H0R1 490 aa12.97□□□□□ -0.33
TRAFD1-206ENST00000549358 C11orf16Q9NQ32 467 aa12.97□□□□□ -0.33
TRAFD1-206ENST00000549358 FBXO40Q9UH90 709 aa12.97□□□□□ -0.33
TRAFD1-206ENST00000549358 EPOPA6NHQ4 379 aa12.96□□□□□ -0.33
TRAFD1-206ENST00000549358 NDUFB10O96000 172 aa12.96□□□□□ -0.33
TRAFD1-206ENST00000549358 CNTN2Q02246 1040 aa12.96□□□□□ -0.33
TRAFD1-206ENST00000549358 CTR9Q6PD62 1173 aa12.96□□□□□ -0.33
TRAFD1-206ENST00000549358 DEFB128Q7Z7B8 93 aa12.96□□□□□ -0.33
TRAFD1-206ENST00000549358 ALYREFQ86V81 257 aaKnown RBP12.96□□□□□ -0.33
TRAFD1-206ENST00000549358 CHST13Q8NET6 341 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms