RNA–Protein interactions for RNA: ENST00000548984.1

PFDN5-206, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-206ENST00000548984 SNHG28P0DPA3 235 aa12.01□□□□□ -0.49
PFDN5-206ENST00000548984 PDHBP11177 359 aa12.01□□□□□ -0.49
PFDN5-206ENST00000548984 SLC4A3P48751 1232 aa12.01□□□□□ -0.49
PFDN5-206ENST00000548984 SYDE2Q5VT97 1194 aa12.01□□□□□ -0.49
PFDN5-206ENST00000548984 MAMDC4Q6UXC1 1216 aa12.01□□□□□ -0.49
PFDN5-206ENST00000548984 ARRDC4Q8NCT1 418 aa12.01□□□□□ -0.49
PFDN5-206ENST00000548984 RANBP17Q9H2T7 1088 aaKnown RBP12.01□□□□□ -0.49
PFDN5-206ENST00000548984 U3KPZ7 1027 aaPredicted RBP12.01□□□□□ -0.49
PFDN5-206ENST00000548984 ZNF536O15090 1300 aa12.01□□□□□ -0.49
PFDN5-206ENST00000548984 ALPK3Q96L96 1907 aa12.01□□□□□ -0.49
PFDN5-206ENST00000548984 CEP290O15078 2479 aa12□□□□□ -0.49
PFDN5-206ENST00000548984 B4E1Z4 1266 aa12□□□□□ -0.49
PFDN5-206ENST00000548984 KBTBD13C9JR72 458 aa12□□□□□ -0.49
PFDN5-206ENST00000548984 SGSM2O43147 1006 aa12□□□□□ -0.49
PFDN5-206ENST00000548984 ICAM1P05362 532 aa12□□□□□ -0.49
PFDN5-206ENST00000548984 RARBP10826 455 aa12□□□□□ -0.49
PFDN5-206ENST00000548984 AKR1A1P14550 325 aa12□□□□□ -0.49
PFDN5-206ENST00000548984 ZNF543Q08ER8 600 aa12□□□□□ -0.49
PFDN5-206ENST00000548984 TRDNQ13061 729 aa12□□□□□ -0.49
PFDN5-206ENST00000548984 PNMA1Q8ND90 353 aa12□□□□□ -0.49
PFDN5-206ENST00000548984 ANKS1AQ92625 1134 aa12□□□□□ -0.49
PFDN5-206ENST00000548984 ZSCAN10Q96SZ4 725 aaPredicted RBP12□□□□□ -0.49
PFDN5-206ENST00000548984 UBAC1Q9BSL1 405 aa12□□□□□ -0.49
PFDN5-206ENST00000548984 IL25Q9H293 177 aa12□□□□□ -0.49
PFDN5-206ENST00000548984 KAT14Q9H8E8 782 aa12□□□□□ -0.49
PFDN5-206ENST00000548984 HOMER2Q9NSB8 354 aa12□□□□□ -0.49
PFDN5-206ENST00000548984 CCPG1Q9ULG6 757 aa12□□□□□ -0.49
PFDN5-206ENST00000548984 MTMR7Q9Y216 660 aa12□□□□□ -0.49
PFDN5-206ENST00000548984 WDR19Q8NEZ3 1342 aa12□□□□□ -0.49
PFDN5-206ENST00000548984 POTEB2H3BUK9 544 aa11.99□□□□□ -0.49
PFDN5-206ENST00000548984 ALAS1P13196 640 aa11.99□□□□□ -0.49
PFDN5-206ENST00000548984 ASPRV1Q53RT3 343 aa11.99□□□□□ -0.49
PFDN5-206ENST00000548984 CCDC174Q6PII3 467 aa11.99□□□□□ -0.49
PFDN5-206ENST00000548984 RASGRP2Q7LDG7 609 aa11.99□□□□□ -0.49
PFDN5-206ENST00000548984 AGBL1Q96MI9 1066 aa11.99□□□□□ -0.49
PFDN5-206ENST00000548984 TRERF1Q96PN7 1200 aa11.99□□□□□ -0.49
PFDN5-206ENST00000548984 A1CFQ9NQ94 594 aaKnown RBP11.99□□□□□ -0.49
PFDN5-206ENST00000548984 TNKSO95271 1327 aa11.99□□□□□ -0.49
PFDN5-206ENST00000548984 FRMPD2Q68DX3 1309 aaPredicted RBP11.99□□□□□ -0.49
PFDN5-206ENST00000548984 LOC102724159A0A0B4J2E5 919 aa11.98□□□□□ -0.49
PFDN5-206ENST00000548984 ASB14A6NK59 587 aa11.98□□□□□ -0.49
PFDN5-206ENST00000548984 ZNF865P0CJ78 1059 aaPredicted RBP11.98□□□□□ -0.49
PFDN5-206ENST00000548984 PWP2Q15269 919 aaKnown RBP11.98□□□□□ -0.49
PFDN5-206ENST00000548984 BMP2KLQ5H9B9 411 aa11.98□□□□□ -0.49
PFDN5-206ENST00000548984 HABP4Q5JVS0 413 aaKnown RBP11.98□□□□□ -0.49
PFDN5-206ENST00000548984 TTBK2Q6IQ55 1244 aa11.98□□□□□ -0.49
PFDN5-206ENST00000548984 C7orf61Q8IZ16 206 aa11.98□□□□□ -0.49
PFDN5-206ENST00000548984 ENAHQ8N8S7 591 aaPredicted RBP11.98□□□□□ -0.49
PFDN5-206ENST00000548984 FAM133AQ8N9E0 248 aa11.98□□□□□ -0.49
PFDN5-206ENST00000548984 CHMP4CQ96CF2 233 aa11.98□□□□□ -0.49
PFDN5-206ENST00000548984 ZKSCAN3Q9BRR0 538 aa11.98□□□□□ -0.49
PFDN5-206ENST00000548984 MAF1Q9H063 256 aa11.98□□□□□ -0.49
PFDN5-206ENST00000548984 ABHD16BQ9H3Z7 469 aa11.98□□□□□ -0.49
PFDN5-206ENST00000548984 GPCPD1Q9NPB8 672 aa11.98□□□□□ -0.49
PFDN5-206ENST00000548984 XPNPEP3Q9NQH7 507 aa11.98□□□□□ -0.49
PFDN5-206ENST00000548984 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.98□□□□□ -0.49
PFDN5-206ENST00000548984 PPP4R2Q9NY27 417 aa11.98□□□□□ -0.49
PFDN5-206ENST00000548984 ZSWIM5Q9P217 1185 aa11.98□□□□□ -0.49
PFDN5-206ENST00000548984 FAM184BQ9ULE4 1060 aa11.98□□□□□ -0.49
PFDN5-206ENST00000548984 LRRC37A2A6NM11 1700 aa11.97□□□□□ -0.49
PFDN5-206ENST00000548984 A0A1W2PPC1 479 aa11.97□□□□□ -0.49
PFDN5-206ENST00000548984 SLC34A2O95436 690 aa11.97□□□□□ -0.49
PFDN5-206ENST00000548984 CYP21A2P08686 494 aa11.97□□□□□ -0.49
PFDN5-206ENST00000548984 SLC16A2P36021 539 aa11.97□□□□□ -0.49
PFDN5-206ENST00000548984 LRRC41Q15345 812 aa11.97□□□□□ -0.49
PFDN5-206ENST00000548984 PRAMEF19Q5SWL8 479 aa11.97□□□□□ -0.49
PFDN5-206ENST00000548984 IFIT1BQ5T764 474 aaKnown RBP11.97□□□□□ -0.49
PFDN5-206ENST00000548984 CASC1Q6TDU7 716 aa11.97□□□□□ -0.49
PFDN5-206ENST00000548984 CHRDL2Q6WN34 429 aa11.97□□□□□ -0.49
PFDN5-206ENST00000548984 ARMCX2Q7L311 632 aa11.97□□□□□ -0.49
PFDN5-206ENST00000548984 RALYLQ86SE5 291 aaKnown RBP11.97□□□□□ -0.49
PFDN5-206ENST00000548984 RNF180Q86T96 592 aa11.97□□□□□ -0.49
PFDN5-206ENST00000548984 FGD4Q96M96 766 aa11.97□□□□□ -0.49
PFDN5-206ENST00000548984 CYP39A1Q9NYL5 469 aa11.97□□□□□ -0.49
PFDN5-206ENST00000548984 ZHX1Q9UKY1 873 aaPredicted RBP11.97□□□□□ -0.49
PFDN5-206ENST00000548984 COLQQ9Y215 455 aaPredicted RBP11.97□□□□□ -0.49
PFDN5-206ENST00000548984 ERICH2A1L162 156 aa11.96□□□□□ -0.49
PFDN5-206ENST00000548984 SNAI1O95863 264 aaPredicted RBP11.96□□□□□ -0.49
PFDN5-206ENST00000548984 PTH1RQ03431 593 aa11.96□□□□□ -0.49
PFDN5-206ENST00000548984 ACVR2BQ13705 512 aa11.96□□□□□ -0.49
PFDN5-206ENST00000548984 SART3Q15020 963 aaKnown RBP11.96□□□□□ -0.49
PFDN5-206ENST00000548984 GJC2Q5T442 439 aaPredicted RBP11.96□□□□□ -0.49
PFDN5-206ENST00000548984 KIAA1211Q6ZU35 1233 aa11.96□□□□□ -0.49
PFDN5-206ENST00000548984 NCOA7Q8NI08 942 aa11.96□□□□□ -0.49
PFDN5-206ENST00000548984 MAP4K1Q92918 833 aa11.96□□□□□ -0.49
PFDN5-206ENST00000548984 SENP6Q9GZR1 1112 aaPredicted RBP11.96□□□□□ -0.49
PFDN5-206ENST00000548984 ADD3Q9UEY8 706 aaKnown RBP11.96□□□□□ -0.49
PFDN5-206ENST00000548984 PHF24Q9UPV7 400 aa11.96□□□□□ -0.49
PFDN5-206ENST00000548984 EIF5BO60841 1220 aaKnown RBP11.95□□□□□ -0.5
PFDN5-206ENST00000548984 DUSP11O75319 330 aaKnown RBP11.95□□□□□ -0.5
PFDN5-206ENST00000548984 PARP1P09874 1014 aaKnown RBP11.95□□□□□ -0.5
PFDN5-206ENST00000548984 TAL1P17542 331 aaPredicted RBP11.95□□□□□ -0.5
PFDN5-206ENST00000548984 SNAP25P60880 206 aa11.95□□□□□ -0.5
PFDN5-206ENST00000548984 CNTN2Q02246 1040 aa11.95□□□□□ -0.5
PFDN5-206ENST00000548984 SEC23AQ15436 765 aa11.95□□□□□ -0.5
PFDN5-206ENST00000548984 LRRC26Q2I0M4 334 aa11.95□□□□□ -0.5
PFDN5-206ENST00000548984 MUM1L1Q5H9M0 696 aa11.95□□□□□ -0.5
PFDN5-206ENST00000548984 C1orf53Q5VUE5 145 aa11.95□□□□□ -0.5
PFDN5-206ENST00000548984 ANO1Q5XXA6 986 aa11.95□□□□□ -0.5
PFDN5-206ENST00000548984 NSMFQ6X4W1 530 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms