RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 PPP2R5BQ15173 497 aa13.24□□□□□ -0.29
CALCOCO1-208ENST00000547988 SNRNP48Q6IEG0 339 aaKnown RBP13.24□□□□□ -0.29
CALCOCO1-208ENST00000547988 OTOP1Q7RTM1 612 aa13.24□□□□□ -0.29
CALCOCO1-208ENST00000547988 ADGRF4Q8IZF3 695 aa13.24□□□□□ -0.29
CALCOCO1-208ENST00000547988 FANCBQ8NB91 859 aa13.24□□□□□ -0.29
CALCOCO1-208ENST00000547988 LZTS2Q9BRK4 669 aa13.24□□□□□ -0.29
CALCOCO1-208ENST00000547988 UBA5Q9GZZ9 404 aa13.24□□□□□ -0.29
CALCOCO1-208ENST00000547988 RBM28Q9NW13 759 aaKnown RBP13.24□□□□□ -0.29
CALCOCO1-208ENST00000547988 TRIM17Q9Y577 477 aa13.24□□□□□ -0.29
CALCOCO1-208ENST00000547988 DHX16O60231 1041 aaKnown RBP13.23□□□□□ -0.29
CALCOCO1-208ENST00000547988 ICAM1P05362 532 aa13.23□□□□□ -0.29
CALCOCO1-208ENST00000547988 ERCC3P19447 782 aa13.23□□□□□ -0.29
CALCOCO1-208ENST00000547988 ANKRD1Q15327 319 aa13.23□□□□□ -0.29
CALCOCO1-208ENST00000547988 PKN2Q16513 984 aaKnown RBP13.23□□□□□ -0.29
CALCOCO1-208ENST00000547988 TKFCQ3LXA3 575 aa13.23□□□□□ -0.29
CALCOCO1-208ENST00000547988 GPR142Q7Z601 462 aa13.23□□□□□ -0.29
CALCOCO1-208ENST00000547988 PLEKHH3Q7Z736 793 aa13.23□□□□□ -0.29
CALCOCO1-208ENST00000547988 NCAPG2Q86XI2 1143 aa13.23□□□□□ -0.29
CALCOCO1-208ENST00000547988 CPXCR1Q8N123 301 aa13.23□□□□□ -0.29
CALCOCO1-208ENST00000547988 IL27Q8NEV9 243 aa13.23□□□□□ -0.29
CALCOCO1-208ENST00000547988 SOCS4Q8WXH5 440 aa13.23□□□□□ -0.29
CALCOCO1-208ENST00000547988 TBC1D32Q96NH3 1257 aa13.23□□□□□ -0.29
CALCOCO1-208ENST00000547988 SPZ1Q9BXG8 430 aa13.23□□□□□ -0.29
CALCOCO1-208ENST00000547988 CPVLQ9H3G5 476 aa13.23□□□□□ -0.29
CALCOCO1-208ENST00000547988 RIOX1Q9H6W3 641 aa13.23□□□□□ -0.29
CALCOCO1-208ENST00000547988 CWC22Q9HCG8 908 aaKnown RBP13.23□□□□□ -0.29
CALCOCO1-208ENST00000547988 RAVER2Q9HCJ3 691 aaKnown RBP13.23□□□□□ -0.29
CALCOCO1-208ENST00000547988 IVNS1ABPQ9Y6Y0 642 aa13.23□□□□□ -0.29
CALCOCO1-208ENST00000547988 CCDC196A0A1B0GTZ2 297 aa13.22□□□□□ -0.29
CALCOCO1-208ENST00000547988 GOLGA8AA7E2F4 631 aa13.22□□□□□ -0.29
CALCOCO1-208ENST00000547988 GOLGA8BA8MQT2 603 aa13.22□□□□□ -0.29
CALCOCO1-208ENST00000547988 STRNO43815 780 aa13.22□□□□□ -0.29
CALCOCO1-208ENST00000547988 RXRAP19793 462 aa13.22□□□□□ -0.29
CALCOCO1-208ENST00000547988 METAP2P50579 478 aaKnown RBP eCLIP13.22□□□□□ -0.29
CALCOCO1-208ENST00000547988 NEK4P51957 841 aa13.22□□□□□ -0.29
CALCOCO1-208ENST00000547988 CDC37Q16543 378 aaPredicted RBP13.22□□□□□ -0.29
CALCOCO1-208ENST00000547988 RTN1Q16799 776 aa13.22□□□□□ -0.29
CALCOCO1-208ENST00000547988 WDR78Q5VTH9 848 aa13.22□□□□□ -0.29
CALCOCO1-208ENST00000547988 CCDC174Q6PII3 467 aa13.22□□□□□ -0.29
CALCOCO1-208ENST00000547988 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.22□□□□□ -0.29
CALCOCO1-208ENST00000547988 CCDC144CPQ8IYA2 1237 aa13.22□□□□□ -0.29
CALCOCO1-208ENST00000547988 ABRAQ8N0Z2 381 aa13.22□□□□□ -0.29
CALCOCO1-208ENST00000547988 CHST13Q8NET6 341 aa13.22□□□□□ -0.29
CALCOCO1-208ENST00000547988 MTMR8Q96EF0 704 aa13.22□□□□□ -0.29
CALCOCO1-208ENST00000547988 ZNF274Q96GC6 653 aaPredicted RBP13.22□□□□□ -0.29
CALCOCO1-208ENST00000547988 KIF2CQ99661 725 aa13.22□□□□□ -0.29
CALCOCO1-208ENST00000547988 JMJD4Q9H9V9 463 aa13.22□□□□□ -0.29
CALCOCO1-208ENST00000547988 SRRDQ9UH36 339 aa13.22□□□□□ -0.29
CALCOCO1-208ENST00000547988 FBXO40Q9UH90 709 aa13.22□□□□□ -0.29
CALCOCO1-208ENST00000547988 CCPG1Q9ULG6 757 aa13.22□□□□□ -0.29
CALCOCO1-208ENST00000547988 NAP1L2Q9ULW6 460 aaPredicted RBP13.22□□□□□ -0.29
CALCOCO1-208ENST00000547988 FRMPD3Q5JV73 1810 aa13.21□□□□□ -0.29
CALCOCO1-208ENST00000547988 SLC15A5A6NIM6 579 aa13.21□□□□□ -0.29
CALCOCO1-208ENST00000547988 CYTH3O43739 400 aa13.21□□□□□ -0.29
CALCOCO1-208ENST00000547988 ECM2O94769 699 aaPredicted RBP13.21□□□□□ -0.29
CALCOCO1-208ENST00000547988 PTPREP23469 700 aa13.21□□□□□ -0.29
CALCOCO1-208ENST00000547988 SNAP25P60880 206 aa13.21□□□□□ -0.29
CALCOCO1-208ENST00000547988 TMTC3Q6ZXV5 915 aa13.21□□□□□ -0.29
CALCOCO1-208ENST00000547988 RAB11FIP4Q86YS3 637 aa13.21□□□□□ -0.29
CALCOCO1-208ENST00000547988 AGBL1Q96MI9 1066 aa13.21□□□□□ -0.29
CALCOCO1-208ENST00000547988 NUDT12Q9BQG2 462 aa13.21□□□□□ -0.29
CALCOCO1-208ENST00000547988 HPS5Q9UPZ3 1129 aa13.21□□□□□ -0.29
CALCOCO1-208ENST00000547988 RIPK3Q9Y572 518 aa13.21□□□□□ -0.29
CALCOCO1-208ENST00000547988 LRRC37A2A6NM11 1700 aa13.21□□□□□ -0.3
CALCOCO1-208ENST00000547988 KIAA1217Q5T5P2 1943 aa13.21□□□□□ -0.3
CALCOCO1-208ENST00000547988 HTTP42858 3142 aa13.2□□□□□ -0.3
CALCOCO1-208ENST00000547988 ZBTB5O15062 677 aa13.2□□□□□ -0.3
CALCOCO1-208ENST00000547988 PLEKHA8P1O95397 391 aa13.2□□□□□ -0.3
CALCOCO1-208ENST00000547988 FCER1AP12319 257 aa13.2□□□□□ -0.3
CALCOCO1-208ENST00000547988 ALAS1P13196 640 aa13.2□□□□□ -0.3
CALCOCO1-208ENST00000547988 PDIA3P30101 505 aaKnown RBP13.2□□□□□ -0.3
CALCOCO1-208ENST00000547988 AK2P54819 239 aa13.2□□□□□ -0.3
CALCOCO1-208ENST00000547988 PRKCZQ05513 592 aa13.2□□□□□ -0.3
CALCOCO1-208ENST00000547988 TRAF1Q13077 416 aa13.2□□□□□ -0.3
CALCOCO1-208ENST00000547988 IRF5Q13568 498 aa13.2□□□□□ -0.3
CALCOCO1-208ENST00000547988 GRB14Q14449 540 aa13.2□□□□□ -0.3
CALCOCO1-208ENST00000547988 RABEP1Q15276 862 aa13.2□□□□□ -0.3
CALCOCO1-208ENST00000547988 QRICH1Q2TAL8 776 aa13.2□□□□□ -0.3
CALCOCO1-208ENST00000547988 MORN1Q5T089 497 aa13.2□□□□□ -0.3
CALCOCO1-208ENST00000547988 FBXO46Q6PJ61 603 aaPredicted RBP13.2□□□□□ -0.3
CALCOCO1-208ENST00000547988 NBPF11Q86T75 865 aa13.2□□□□□ -0.3
CALCOCO1-208ENST00000547988 SRBD1Q8N5C6 995 aaKnown RBP13.2□□□□□ -0.3
CALCOCO1-208ENST00000547988 ACAD9Q9H845 621 aa13.2□□□□□ -0.3
CALCOCO1-208ENST00000547988 VAT1LQ9HCJ6 419 aa13.2□□□□□ -0.3
CALCOCO1-208ENST00000547988 RNF146Q9NTX7 359 aa13.2□□□□□ -0.3
CALCOCO1-208ENST00000547988 GJD2Q9UKL4 321 aa13.2□□□□□ -0.3
CALCOCO1-208ENST00000547988 PTPN22Q9Y2R2 807 aa13.2□□□□□ -0.3
CALCOCO1-208ENST00000547988 ABCB11O95342 1321 aa13.19□□□□□ -0.3
CALCOCO1-208ENST00000547988 CNTNAP5Q8WYK1 1306 aa13.19□□□□□ -0.3
CALCOCO1-208ENST00000547988 PNMA6FA0A0J9YX94 578 aa13.19□□□□□ -0.3
CALCOCO1-208ENST00000547988 RGS2P41220 211 aa13.19□□□□□ -0.3
CALCOCO1-208ENST00000547988 SLC4A3P48751 1232 aa13.19□□□□□ -0.3
CALCOCO1-208ENST00000547988 FLT3LGP49771 235 aa13.19□□□□□ -0.3
CALCOCO1-208ENST00000547988 SLC35G1Q2M3R5 365 aa13.19□□□□□ -0.3
CALCOCO1-208ENST00000547988 FBXO11Q86XK2 927 aa13.19□□□□□ -0.3
CALCOCO1-208ENST00000547988 HOMER1Q86YM7 354 aa13.19□□□□□ -0.3
CALCOCO1-208ENST00000547988 USP6NLQ92738 828 aa13.19□□□□□ -0.3
CALCOCO1-208ENST00000547988 RRP36Q96EU6 259 aaKnown RBP13.19□□□□□ -0.3
CALCOCO1-208ENST00000547988 TRERF1Q96PN7 1200 aa13.19□□□□□ -0.3
CALCOCO1-208ENST00000547988 MMP19Q99542 508 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms