RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 EVI5LQ96CN4 794 aa7.97□□□□□ -1.13
SCAF11-211ENST00000547950 MAML3Q96JK9 1138 aa7.97□□□□□ -1.13
SCAF11-211ENST00000547950 LNPKQ9C0E8 428 aa7.97□□□□□ -1.13
SCAF11-211ENST00000547950 PRO3102Q9H379 93 aa7.97□□□□□ -1.13
SCAF11-211ENST00000547950 RWDD1Q9H446 243 aaPredicted RBP7.97□□□□□ -1.13
SCAF11-211ENST00000547950 PTPRFP10586 1907 aa7.96□□□□□ -1.13
SCAF11-211ENST00000547950 TRIM6-TRIM34B2RNG4 842 aa7.96□□□□□ -1.14
SCAF11-211ENST00000547950 IGHA2P01877 340 aa7.96□□□□□ -1.14
SCAF11-211ENST00000547950 IKQ13123 557 aaPredicted RBP7.96□□□□□ -1.14
SCAF11-211ENST00000547950 VPS53Q5VIR6 699 aa7.96□□□□□ -1.14
SCAF11-211ENST00000547950 SLFN13Q68D06 897 aa7.96□□□□□ -1.14
SCAF11-211ENST00000547950 SNRNP48Q6IEG0 339 aaKnown RBP7.96□□□□□ -1.14
SCAF11-211ENST00000547950 REPS2Q8NFH8 660 aa7.96□□□□□ -1.14
SCAF11-211ENST00000547950 NEDD1Q8NHV4 660 aa7.96□□□□□ -1.14
SCAF11-211ENST00000547950 ZDHHC16Q969W1 377 aa7.96□□□□□ -1.14
SCAF11-211ENST00000547950 RILPL2Q969X0 211 aa7.96□□□□□ -1.14
SCAF11-211ENST00000547950 DDX11Q96FC9 970 aa7.96□□□□□ -1.14
SCAF11-211ENST00000547950 FAM227BQ96M60 508 aa7.96□□□□□ -1.14
SCAF11-211ENST00000547950 ADAM33Q9BZ11 813 aa7.96□□□□□ -1.14
SCAF11-211ENST00000547950 RAVER2Q9HCJ3 691 aaKnown RBP7.96□□□□□ -1.14
SCAF11-211ENST00000547950 TOMM22Q9NS69 142 aa7.96□□□□□ -1.14
SCAF11-211ENST00000547950 FEM1BQ9UK73 627 aa7.96□□□□□ -1.14
SCAF11-211ENST00000547950 ZNF214Q9UL59 606 aaPredicted RBP7.96□□□□□ -1.14
SCAF11-211ENST00000547950 MTMR7Q9Y216 660 aa7.96□□□□□ -1.14
SCAF11-211ENST00000547950 RIPK3Q9Y572 518 aa7.96□□□□□ -1.14
SCAF11-211ENST00000547950 RBBP6Q7Z6E9 1792 aaKnown RBP7.96□□□□□ -1.14
SCAF11-211ENST00000547950 SALL3Q9BXA9 1300 aa7.96□□□□□ -1.14
SCAF11-211ENST00000547950 ATAD5Q96QE3 1844 aa7.95□□□□□ -1.14
SCAF11-211ENST00000547950 TSPY2A6NKD2 308 aa7.95□□□□□ -1.14
SCAF11-211ENST00000547950 TMEM232C9JQI7 657 aa7.95□□□□□ -1.14
SCAF11-211ENST00000547950 KBTBD13C9JR72 458 aa7.95□□□□□ -1.14
SCAF11-211ENST00000547950 DNM1LO00429 736 aa7.95□□□□□ -1.14
SCAF11-211ENST00000547950 SEPT4O43236 478 aa7.95□□□□□ -1.14
SCAF11-211ENST00000547950 RANBP6O60518 1105 aaKnown RBP7.95□□□□□ -1.14
SCAF11-211ENST00000547950 NMT2O60551 498 aa7.95□□□□□ -1.14
SCAF11-211ENST00000547950 IGHDP01880 384 aa7.95□□□□□ -1.14
SCAF11-211ENST00000547950 BMP3P12645 472 aa7.95□□□□□ -1.14
SCAF11-211ENST00000547950 TAL1P17542 331 aaPredicted RBP7.95□□□□□ -1.14
SCAF11-211ENST00000547950 MCCP23508 829 aa7.95□□□□□ -1.14
SCAF11-211ENST00000547950 COPB2P35606 906 aa7.95□□□□□ -1.14
SCAF11-211ENST00000547950 ADCYAP1R1P41586 468 aa7.95□□□□□ -1.14
SCAF11-211ENST00000547950 MAGEA10P43363 369 aaPredicted RBP7.95□□□□□ -1.14
SCAF11-211ENST00000547950 PTPN5P54829 565 aa7.95□□□□□ -1.14
SCAF11-211ENST00000547950 MDM2Q00987 491 aaPredicted RBP7.95□□□□□ -1.14
SCAF11-211ENST00000547950 ZNF792Q3KQV3 632 aa7.95□□□□□ -1.14
SCAF11-211ENST00000547950 RRP12Q5JTH9 1297 aaKnown RBP7.95□□□□□ -1.14
SCAF11-211ENST00000547950 GMCL1P1Q8NEA9 526 aa7.95□□□□□ -1.14
SCAF11-211ENST00000547950 EXOC6Q8TAG9 804 aa7.95□□□□□ -1.14
SCAF11-211ENST00000547950 FERMT2Q96AC1 680 aa7.95□□□□□ -1.14
SCAF11-211ENST00000547950 GDF15Q99988 308 aa7.95□□□□□ -1.14
SCAF11-211ENST00000547950 TINF2Q9BSI4 451 aa7.95□□□□□ -1.14
SCAF11-211ENST00000547950 TEX13BQ9BXU2 312 aa7.95□□□□□ -1.14
SCAF11-211ENST00000547950 UBE2OQ9C0C9 1292 aaKnown RBP7.95□□□□□ -1.14
SCAF11-211ENST00000547950 HELLSQ9NRZ9 838 aa7.95□□□□□ -1.14
SCAF11-211ENST00000547950 STX8Q9UNK0 236 aa7.95□□□□□ -1.14
SCAF11-211ENST00000547950 MYH1P12882 1939 aa7.95□□□□□ -1.14
SCAF11-211ENST00000547950 ROBO3Q96MS0 1386 aa7.95□□□□□ -1.14
SCAF11-211ENST00000547950 FOCADQ5VW36 1801 aa7.94□□□□□ -1.14
SCAF11-211ENST00000547950 MGAMO43451 1857 aa7.94□□□□□ -1.14
SCAF11-211ENST00000547950 GOLGA8CPA6NN73 597 aa7.94□□□□□ -1.14
SCAF11-211ENST00000547950 FOXP2O15409 715 aa7.94□□□□□ -1.14
SCAF11-211ENST00000547950 FGAP02671 866 aa7.94□□□□□ -1.14
SCAF11-211ENST00000547950 RARBP10826 455 aa7.94□□□□□ -1.14
SCAF11-211ENST00000547950 BMP8BP34820 402 aa7.94□□□□□ -1.14
SCAF11-211ENST00000547950 SLC1A4P43007 532 aa7.94□□□□□ -1.14
SCAF11-211ENST00000547950 SNAP25P60880 206 aa7.94□□□□□ -1.14
SCAF11-211ENST00000547950 NMIQ13287 307 aaPredicted RBP7.94□□□□□ -1.14
SCAF11-211ENST00000547950 AAMPQ13685 434 aa7.94□□□□□ -1.14
SCAF11-211ENST00000547950 MCMDC2Q4G0Z9 681 aa7.94□□□□□ -1.14
SCAF11-211ENST00000547950 SLC39A5Q6ZMH5 540 aa7.94□□□□□ -1.14
SCAF11-211ENST00000547950 CHD1LQ86WJ1 897 aa7.94□□□□□ -1.14
SCAF11-211ENST00000547950 ANKRD35Q8N283 1001 aa7.94□□□□□ -1.14
SCAF11-211ENST00000547950 CHURC1Q8WUH1 139 aa7.94□□□□□ -1.14
SCAF11-211ENST00000547950 STAG1Q8WVM7 1258 aa7.94□□□□□ -1.14
SCAF11-211ENST00000547950 LRCH3Q96II8 777 aa7.94□□□□□ -1.14
SCAF11-211ENST00000547950 LBHD1Q9BQE6 289 aaPredicted RBP7.94□□□□□ -1.14
SCAF11-211ENST00000547950 SLC38A10Q9HBR0 1119 aa7.94□□□□□ -1.14
SCAF11-211ENST00000547950 XPNPEP3Q9NQH7 507 aa7.94□□□□□ -1.14
SCAF11-211ENST00000547950 IL17RBQ9NRM6 502 aa7.94□□□□□ -1.14
SCAF11-211ENST00000547950 HOMER2Q9NSB8 354 aa7.94□□□□□ -1.14
SCAF11-211ENST00000547950 CNPY2Q9Y2B0 182 aa7.94□□□□□ -1.14
SCAF11-211ENST00000547950 ATP11BQ9Y2G3 1177 aa7.94□□□□□ -1.14
SCAF11-211ENST00000547950 DIS3Q9Y2L1 958 aaKnown RBP7.94□□□□□ -1.14
SCAF11-211ENST00000547950 CDK5RAP2Q96SN8 1893 aa7.94□□□□□ -1.14
SCAF11-211ENST00000547950 A0A0D9SFI3 127 aa7.93□□□□□ -1.14
SCAF11-211ENST00000547950 A0A1W2PPC1 479 aa7.93□□□□□ -1.14
SCAF11-211ENST00000547950 SOX1O00570 391 aaPredicted RBP7.93□□□□□ -1.14
SCAF11-211ENST00000547950 ATP2A1O14983 1001 aa7.93□□□□□ -1.14
SCAF11-211ENST00000547950 PGK1P00558 417 aa7.93□□□□□ -1.14
SCAF11-211ENST00000547950 ZNF865P0CJ78 1059 aaPredicted RBP7.93□□□□□ -1.14
SCAF11-211ENST00000547950 HSPD1P10809 573 aaKnown RBP7.93□□□□□ -1.14
SCAF11-211ENST00000547950 STAT2P52630 851 aa7.93□□□□□ -1.14
SCAF11-211ENST00000547950 RTP1P59025 263 aa7.93□□□□□ -1.14
SCAF11-211ENST00000547950 HAND2P61296 217 aa7.93□□□□□ -1.14
SCAF11-211ENST00000547950 LRRC41Q15345 812 aa7.93□□□□□ -1.14
SCAF11-211ENST00000547950 ALX1Q15699 326 aa7.93□□□□□ -1.14
SCAF11-211ENST00000547950 RCSD1Q6JBY9 416 aa7.93□□□□□ -1.14
SCAF11-211ENST00000547950 CCDC174Q6PII3 467 aa7.93□□□□□ -1.14
SCAF11-211ENST00000547950 KCTD1Q719H9 257 aa7.93□□□□□ -1.14
SCAF11-211ENST00000547950 SMC5Q8IY18 1101 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms