RNA–Protein interactions for RNA: ENST00000547877.5

LETMD1-212, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 2,020 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-212ENST00000547877 PPP1R9AQ9ULJ8 1098 aa17.17■□□□□ 0.34
LETMD1-212ENST00000547877 CCL15-CCL14A0A0B4J2E2 113 aa17.16■□□□□ 0.34
LETMD1-212ENST00000547877 STX6O43752 255 aa17.16■□□□□ 0.34
LETMD1-212ENST00000547877 SNAP25P60880 206 aa17.16■□□□□ 0.34
LETMD1-212ENST00000547877 COG2Q14746 738 aa17.16■□□□□ 0.34
LETMD1-212ENST00000547877 CDC37Q16543 378 aaPredicted RBP17.16■□□□□ 0.34
LETMD1-212ENST00000547877 CCL15Q16663 113 aa17.16■□□□□ 0.34
LETMD1-212ENST00000547877 LARP1BQ659C4 914 aaKnown RBP17.16■□□□□ 0.34
LETMD1-212ENST00000547877 BRI3BPQ8WY22 251 aa17.16■□□□□ 0.34
LETMD1-212ENST00000547877 CCDC102AQ96A19 550 aa17.16■□□□□ 0.34
LETMD1-212ENST00000547877 RLFQ13129 1914 aa17.16■□□□□ 0.34
LETMD1-212ENST00000547877 PNMA6FA0A0J9YX94 578 aa17.16■□□□□ 0.34
LETMD1-212ENST00000547877 FAM155AB1AL88 458 aaPredicted RBP17.16■□□□□ 0.34
LETMD1-212ENST00000547877 PDCP20941 246 aa17.16■□□□□ 0.34
LETMD1-212ENST00000547877 SYT1P21579 422 aa17.16■□□□□ 0.34
LETMD1-212ENST00000547877 FOSBP53539 338 aa17.16■□□□□ 0.34
LETMD1-212ENST00000547877 GPAT2Q6NUI2 795 aa17.16■□□□□ 0.34
LETMD1-212ENST00000547877 GPKOWQ92917 476 aaPredicted RBP eCLIP17.16■□□□□ 0.34
LETMD1-212ENST00000547877 GJB4Q9NTQ9 266 aa17.16■□□□□ 0.34
LETMD1-212ENST00000547877 QRICH1Q2TAL8 776 aa17.15■□□□□ 0.34
LETMD1-212ENST00000547877 PAXIP1Q6ZW49 1069 aaPredicted RBP17.15■□□□□ 0.34
LETMD1-212ENST00000547877 RANBP17Q9H2T7 1088 aaKnown RBP17.15■□□□□ 0.34
LETMD1-212ENST00000547877 PPP1R11O60927 126 aaPredicted RBP17.14■□□□□ 0.34
LETMD1-212ENST00000547877 DSG3P32926 999 aa17.14■□□□□ 0.34
LETMD1-212ENST00000547877 WWC2Q6AWC2 1192 aa17.14■□□□□ 0.34
LETMD1-212ENST00000547877 HEATR3Q7Z4Q2 680 aa17.14■□□□□ 0.34
LETMD1-212ENST00000547877 ATG4CQ96DT6 458 aa17.14■□□□□ 0.34
LETMD1-212ENST00000547877 C8orf76Q96K31 380 aa17.14■□□□□ 0.34
LETMD1-212ENST00000547877 HOXC10Q9NYD6 342 aa17.14■□□□□ 0.34
LETMD1-212ENST00000547877 VPS54Q9P1Q0 977 aa17.14■□□□□ 0.34
LETMD1-212ENST00000547877 SPDYE16A6NNV3 312 aaPredicted RBP17.14■□□□□ 0.33
LETMD1-212ENST00000547877 BTBD19C9JJ37 291 aa17.14■□□□□ 0.33
LETMD1-212ENST00000547877 VWA5AO00534 786 aa17.14■□□□□ 0.33
LETMD1-212ENST00000547877 IRX3P78415 501 aaPredicted RBP17.14■□□□□ 0.33
LETMD1-212ENST00000547877 GRM1Q13255 1194 aa17.14■□□□□ 0.33
LETMD1-212ENST00000547877 PABPC4Q13310 644 aaKnown RBP eCLIP17.14■□□□□ 0.334e-6■■■■□ 20.1
LETMD1-212ENST00000547877 CYP4F22Q6NT55 531 aa17.14■□□□□ 0.33
LETMD1-212ENST00000547877 GAS2L3Q86XJ1 694 aa17.14■□□□□ 0.33
LETMD1-212ENST00000547877 GPT2Q8TD30 523 aa17.14■□□□□ 0.33
LETMD1-212ENST00000547877 SHISA4Q96DD7 197 aa17.14■□□□□ 0.33
LETMD1-212ENST00000547877 ASCC2Q9H1I8 757 aaPredicted RBP17.14■□□□□ 0.33
LETMD1-212ENST00000547877 SLC38A10Q9HBR0 1119 aa17.14■□□□□ 0.33
LETMD1-212ENST00000547877 BARHL2Q9NY43 387 aa17.14■□□□□ 0.33
LETMD1-212ENST00000547877 MYPNQ86TC9 1320 aa17.13■□□□□ 0.33
LETMD1-212ENST00000547877 MANSC4A6NHS7 340 aaPredicted RBP17.13■□□□□ 0.33
LETMD1-212ENST00000547877 RASSF10A6NK89 507 aa17.13■□□□□ 0.33
LETMD1-212ENST00000547877 GUCY1B3Q02153 619 aa17.13■□□□□ 0.33
LETMD1-212ENST00000547877 CSPP1Q1MSJ5 1256 aa17.13■□□□□ 0.33
LETMD1-212ENST00000547877 ZSCAN23Q3MJ62 389 aa17.13■□□□□ 0.33
LETMD1-212ENST00000547877 OTUD7BQ6GQQ9 843 aa17.13■□□□□ 0.33
LETMD1-212ENST00000547877 CCDC174Q6PII3 467 aa17.13■□□□□ 0.33
LETMD1-212ENST00000547877 FBXO18Q8NFZ0 1043 aa17.13■□□□□ 0.33
LETMD1-212ENST00000547877 SYAP1Q96A49 352 aaPredicted RBP17.13■□□□□ 0.33
LETMD1-212ENST00000547877 PTPN18Q99952 460 aa17.13■□□□□ 0.33
LETMD1-212ENST00000547877 ADAMTS5Q9UNA0 930 aa17.13■□□□□ 0.33
LETMD1-212ENST00000547877 TESPA1A2RU30 521 aaPredicted RBP17.13■□□□□ 0.33
LETMD1-212ENST00000547877 H3BQV1 296 aa17.13■□□□□ 0.33
LETMD1-212ENST00000547877 F13A1P00488 732 aa17.13■□□□□ 0.33
LETMD1-212ENST00000547877 XBP1P17861 261 aa17.13■□□□□ 0.33
LETMD1-212ENST00000547877 NCLP19338 710 aaKnown RBP17.13■□□□□ 0.33
LETMD1-212ENST00000547877 DEFB115Q30KQ5 88 aa17.13■□□□□ 0.33
LETMD1-212ENST00000547877 IFFO2Q5TF58 517 aa17.13■□□□□ 0.33
LETMD1-212ENST00000547877 TYW1BQ6NUM6 668 aa17.13■□□□□ 0.33
LETMD1-212ENST00000547877 COA7Q96BR5 231 aa17.13■□□□□ 0.33
LETMD1-212ENST00000547877 P2RX7Q99572 595 aaKnown RBP17.13■□□□□ 0.33
LETMD1-212ENST00000547877 STXBP3O00186 592 aa17.12■□□□□ 0.33
LETMD1-212ENST00000547877 PDHXO00330 501 aa17.12■□□□□ 0.33
LETMD1-212ENST00000547877 TRIM29Q14134 588 aa17.12■□□□□ 0.33
LETMD1-212ENST00000547877 CAVIN1Q6NZI2 390 aaKnown RBP17.12■□□□□ 0.33
LETMD1-212ENST00000547877 ANKRD23Q86SG2 305 aa17.12■□□□□ 0.33
LETMD1-212ENST00000547877 FAM43AQ8N2R8 423 aa17.12■□□□□ 0.33
LETMD1-212ENST00000547877 AMNQ9BXJ7 453 aa17.12■□□□□ 0.33
LETMD1-212ENST00000547877 SLC45A1Q9Y2W3 748 aa17.12■□□□□ 0.33
LETMD1-212ENST00000547877 PCDHA1Q9Y5I3 950 aa17.12■□□□□ 0.33
LETMD1-212ENST00000547877 ZNF536O15090 1300 aa17.12■□□□□ 0.33
LETMD1-212ENST00000547877 VPS37CA5D8V6 355 aaPredicted RBP17.11■□□□□ 0.33
LETMD1-212ENST00000547877 hCG_1984214I3L0E3 225 aa17.11■□□□□ 0.33
LETMD1-212ENST00000547877 FDX1P10109 184 aa17.11■□□□□ 0.33
LETMD1-212ENST00000547877 OSBPP22059 807 aa17.11■□□□□ 0.33
LETMD1-212ENST00000547877 USH1GQ495M9 461 aa17.11■□□□□ 0.33
LETMD1-212ENST00000547877 KRT40Q6A162 431 aa17.11■□□□□ 0.33
LETMD1-212ENST00000547877 FBXO11Q86XK2 927 aa17.11■□□□□ 0.33
LETMD1-212ENST00000547877 ZNF713Q8N859 430 aaPredicted RBP17.11■□□□□ 0.33
LETMD1-212ENST00000547877 SH3GLB2Q9NR46 395 aa17.11■□□□□ 0.33
LETMD1-212ENST00000547877 KCNJ14Q9UNX9 436 aa17.11■□□□□ 0.33
LETMD1-212ENST00000547877 ZBED4O75132 1171 aa17.11■□□□□ 0.33
LETMD1-212ENST00000547877 ICAM1P05362 532 aa17.11■□□□□ 0.33
LETMD1-212ENST00000547877 NAPAP54920 295 aa17.11■□□□□ 0.33
LETMD1-212ENST00000547877 HERVK_113P62684 666 aa17.11■□□□□ 0.33
LETMD1-212ENST00000547877 CPXCR1Q8N123 301 aa17.11■□□□□ 0.33
LETMD1-212ENST00000547877 PNMA3Q9UL41 463 aa17.11■□□□□ 0.33
LETMD1-212ENST00000547877 MTMR6Q9Y217 621 aa17.11■□□□□ 0.33
LETMD1-212ENST00000547877 CTDP1Q9Y5B0 961 aaPredicted RBP17.11■□□□□ 0.33
LETMD1-212ENST00000547877 COL11A1P12107 1806 aaPredicted RBP17.11■□□□□ 0.33
LETMD1-212ENST00000547877 CYP2C8P10632 490 aa17.1■□□□□ 0.33
LETMD1-212ENST00000547877 TAL1P17542 331 aaPredicted RBP17.1■□□□□ 0.33
LETMD1-212ENST00000547877 INHBEP58166 350 aa17.1■□□□□ 0.33
LETMD1-212ENST00000547877 POTEEQ6S8J3 1075 aa17.1■□□□□ 0.33
LETMD1-212ENST00000547877 REPS2Q8NFH8 660 aa17.1■□□□□ 0.33
LETMD1-212ENST00000547877 AGBL1Q96MI9 1066 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms