RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 A0A1W2PQ27 194 aa4.43□□□□□ -1.7
DEPDC4-204ENST00000547823 A0A1W2PQ64 194 aa4.43□□□□□ -1.7
DEPDC4-204ENST00000547823 A0A1W2PQC6 194 aa4.43□□□□□ -1.7
DEPDC4-204ENST00000547823 A0A1W2PQD8 194 aa4.43□□□□□ -1.7
DEPDC4-204ENST00000547823 SH3D21A4FU49 640 aa4.43□□□□□ -1.7
DEPDC4-204ENST00000547823 RBAK-RBAKDNI3L0D1 243 aa4.43□□□□□ -1.7
DEPDC4-204ENST00000547823 SRGAP3O43295 1099 aa4.43□□□□□ -1.7
DEPDC4-204ENST00000547823 SUV39H1O43463 412 aa4.43□□□□□ -1.7
DEPDC4-204ENST00000547823 ZNF205O95201 554 aa4.43□□□□□ -1.7
DEPDC4-204ENST00000547823 PRAMEF1O95521 474 aa4.43□□□□□ -1.7
DEPDC4-204ENST00000547823 MSL3P1P0C860 447 aa4.43□□□□□ -1.7
DEPDC4-204ENST00000547823 KCNA1Q09470 495 aa4.43□□□□□ -1.7
DEPDC4-204ENST00000547823 MEI1Q5TIA1 1274 aa4.43□□□□□ -1.7
DEPDC4-204ENST00000547823 LIPIQ6XZB0 460 aa4.43□□□□□ -1.7
DEPDC4-204ENST00000547823 TMC3Q7Z5M5 1100 aa4.43□□□□□ -1.7
DEPDC4-204ENST00000547823 RELL1Q8IUW5 271 aa4.43□□□□□ -1.7
DEPDC4-204ENST00000547823 TTC9BQ8N6N2 239 aa4.43□□□□□ -1.7
DEPDC4-204ENST00000547823 RHOVQ96L33 236 aa4.43□□□□□ -1.7
DEPDC4-204ENST00000547823 DUSP9Q99956 384 aaKnown RBP4.43□□□□□ -1.7
DEPDC4-204ENST00000547823 CHST7Q9NS84 486 aa4.43□□□□□ -1.7
DEPDC4-204ENST00000547823 ERVK13-1Q9NX77 482 aa4.43□□□□□ -1.7
DEPDC4-204ENST00000547823 POLR3KQ9Y2Y1 108 aaPredicted RBP4.43□□□□□ -1.7
DEPDC4-204ENST00000547823 SMARCA4P51532 1647 aa4.43□□□□□ -1.7
DEPDC4-204ENST00000547823 USP31Q70CQ4 1352 aa4.42□□□□□ -1.7
DEPDC4-204ENST00000547823 PATL2C9JE40 543 aaKnown RBP4.42□□□□□ -1.7
DEPDC4-204ENST00000547823 PRICKLE3O43900 615 aaPredicted RBP4.42□□□□□ -1.7
DEPDC4-204ENST00000547823 CLEC3AO75596 197 aa4.42□□□□□ -1.7
DEPDC4-204ENST00000547823 UBOX5O94941 541 aa4.42□□□□□ -1.7
DEPDC4-204ENST00000547823 PF4P02776 101 aa4.42□□□□□ -1.7
DEPDC4-204ENST00000547823 CYBBP04839 570 aa4.42□□□□□ -1.7
DEPDC4-204ENST00000547823 CWF19L2Q2TBE0 894 aaKnown RBP4.42□□□□□ -1.7
DEPDC4-204ENST00000547823 EAPPQ56P03 285 aaPredicted RBP4.42□□□□□ -1.7
DEPDC4-204ENST00000547823 SNAP47Q5SQN1 464 aa4.42□□□□□ -1.7
DEPDC4-204ENST00000547823 PAQR3Q6TCH7 311 aa4.42□□□□□ -1.7
DEPDC4-204ENST00000547823 TMEM74Q96NL1 305 aa4.42□□□□□ -1.7
DEPDC4-204ENST00000547823 RSRP1Q9BUV0 290 aa4.42□□□□□ -1.7
DEPDC4-204ENST00000547823 CDADC1Q9BWV3 514 aa4.42□□□□□ -1.7
DEPDC4-204ENST00000547823 SUSD2Q9UGT4 822 aa4.42□□□□□ -1.7
DEPDC4-204ENST00000547823 FAN1Q9Y2M0 1017 aa4.42□□□□□ -1.7
DEPDC4-204ENST00000547823 PMF1-BGLAPU3KQ54 211 aa4.42□□□□□ -1.7
DEPDC4-204ENST00000547823 C1QTNF3-AMACRE9PGA6 284 aa4.41□□□□□ -1.7
DEPDC4-204ENST00000547823 GRIN3BO60391 1043 aa4.41□□□□□ -1.7
DEPDC4-204ENST00000547823 TNFRSF1AP19438 455 aa4.41□□□□□ -1.7
DEPDC4-204ENST00000547823 CORO7P57737 925 aa4.41□□□□□ -1.7
DEPDC4-204ENST00000547823 GJA9P57773 515 aa4.41□□□□□ -1.7
DEPDC4-204ENST00000547823 ADAM17P78536 824 aa4.41□□□□□ -1.7
DEPDC4-204ENST00000547823 ZXDAP98168 799 aa4.41□□□□□ -1.7
DEPDC4-204ENST00000547823 ZNF200P98182 395 aaPredicted RBP4.41□□□□□ -1.7
DEPDC4-204ENST00000547823 PSMD2Q13200 908 aa4.41□□□□□ -1.7
DEPDC4-204ENST00000547823 VWA3BQ502W6 1294 aa4.41□□□□□ -1.7
DEPDC4-204ENST00000547823 ARSHQ5FYA8 562 aa4.41□□□□□ -1.7
DEPDC4-204ENST00000547823 NT5DC1Q5TFE4 455 aa4.41□□□□□ -1.7
DEPDC4-204ENST00000547823 CDCP2Q5VXM1 449 aa4.41□□□□□ -1.7
DEPDC4-204ENST00000547823 HLA-DQA1Q5Y7H0 255 aa4.41□□□□□ -1.7
DEPDC4-204ENST00000547823 CYP2R1Q6VVX0 501 aa4.41□□□□□ -1.7
DEPDC4-204ENST00000547823 SAPCD2Q86UD0 394 aa4.41□□□□□ -1.7
DEPDC4-204ENST00000547823 CRELD1Q96HD1 420 aa4.41□□□□□ -1.7
DEPDC4-204ENST00000547823 SMPD4Q9NXE4 827 aa4.41□□□□□ -1.7
DEPDC4-204ENST00000547823 IMPACTQ9P2X3 320 aa4.41□□□□□ -1.7
DEPDC4-204ENST00000547823 PCDHB12Q9Y5F1 795 aa4.41□□□□□ -1.7
DEPDC4-204ENST00000547823 CADPSQ9ULU8 1353 aa4.4□□□□□ -1.7
DEPDC4-204ENST00000547823 A0A1W2PQJ5 194 aa4.4□□□□□ -1.71
DEPDC4-204ENST00000547823 AKAP8O43823 692 aaKnown RBP4.4□□□□□ -1.71
DEPDC4-204ENST00000547823 ATE1O95260 518 aa4.4□□□□□ -1.71
DEPDC4-204ENST00000547823 ITGB3P05106 788 aa4.4□□□□□ -1.71
DEPDC4-204ENST00000547823 GSNP06396 782 aa4.4□□□□□ -1.71
DEPDC4-204ENST00000547823 GBP2P32456 591 aaPredicted RBP4.4□□□□□ -1.71
DEPDC4-204ENST00000547823 LIMS1P48059 325 aa4.4□□□□□ -1.71
DEPDC4-204ENST00000547823 NCKAP1LP55160 1127 aa4.4□□□□□ -1.71
DEPDC4-204ENST00000547823 FAM196AQ6ZSG2 479 aa4.4□□□□□ -1.71
DEPDC4-204ENST00000547823 NAT16Q8N8M0 369 aa4.4□□□□□ -1.71
DEPDC4-204ENST00000547823 FNIP1Q8TF40 1166 aa4.4□□□□□ -1.71
DEPDC4-204ENST00000547823 LRRC3Q9BY71 257 aa4.4□□□□□ -1.71
DEPDC4-204ENST00000547823 PRDM14Q9GZV8 571 aa4.4□□□□□ -1.71
DEPDC4-204ENST00000547823 IVNS1ABPQ9Y6Y0 642 aa4.4□□□□□ -1.71
DEPDC4-204ENST00000547823 CEP164Q9UPV0 1460 aa4.4□□□□□ -1.71
DEPDC4-204ENST00000547823 CHD1O14646 1710 aa4.39□□□□□ -1.71
DEPDC4-204ENST00000547823 DNAJA2O60884 412 aa4.39□□□□□ -1.71
DEPDC4-204ENST00000547823 NCAM1P13591 858 aa4.39□□□□□ -1.71
DEPDC4-204ENST00000547823 HTRA3P83110 453 aa4.39□□□□□ -1.71
DEPDC4-204ENST00000547823 DAB2P98082 770 aa4.39□□□□□ -1.71
DEPDC4-204ENST00000547823 FOXO4P98177 505 aa4.39□□□□□ -1.71
DEPDC4-204ENST00000547823 CPZQ66K79 652 aa4.39□□□□□ -1.71
DEPDC4-204ENST00000547823 ZPBP2Q6X784 338 aa4.39□□□□□ -1.71
DEPDC4-204ENST00000547823 JAMLQ86YT9 394 aa4.39□□□□□ -1.71
DEPDC4-204ENST00000547823 RGS22Q8NE09 1264 aa4.39□□□□□ -1.71
DEPDC4-204ENST00000547823 SAMD11Q96NU1 681 aa4.39□□□□□ -1.71
DEPDC4-204ENST00000547823 ARID3AQ99856 593 aa4.39□□□□□ -1.71
DEPDC4-204ENST00000547823 C1QTNF3Q9BXJ4 246 aa4.39□□□□□ -1.71
DEPDC4-204ENST00000547823 CNNM2Q9H8M5 875 aa4.39□□□□□ -1.71
DEPDC4-204ENST00000547823 PEG3Q9GZU2 1588 aa4.39□□□□□ -1.71
DEPDC4-204ENST00000547823 HECW2Q9P2P5 1572 aa4.39□□□□□ -1.71
DEPDC4-204ENST00000547823 RSF1Q96T23 1441 aaPredicted RBP4.38□□□□□ -1.71
DEPDC4-204ENST00000547823 DBHP09172 617 aa4.38□□□□□ -1.71
DEPDC4-204ENST00000547823 VAV1P15498 845 aa4.38□□□□□ -1.71
DEPDC4-204ENST00000547823 FBLN1P23142 703 aa4.38□□□□□ -1.71
DEPDC4-204ENST00000547823 XPCQ01831 940 aaPredicted RBP4.38□□□□□ -1.71
DEPDC4-204ENST00000547823 SNW1Q13573 536 aaKnown RBP4.38□□□□□ -1.71
DEPDC4-204ENST00000547823 LRRFIP1Q32MZ4 808 aaKnown RBP4.38□□□□□ -1.71
DEPDC4-204ENST00000547823 CWF19L1Q69YN2 538 aaKnown RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms