RNA–Protein interactions for RNA: ENST00000547614.5

CHMP1A-203, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-203ENST00000547614 CHMP4CQ96CF2 233 aa21.97■■□□□ 1.11
CHMP1A-203ENST00000547614 ACAD9Q9H845 621 aa21.97■■□□□ 1.11
CHMP1A-203ENST00000547614 CTNNA3Q9UI47 895 aa21.97■■□□□ 1.11
CHMP1A-203ENST00000547614 SMCHD1A6NHR9 2005 aa21.97■■□□□ 1.11
CHMP1A-203ENST00000547614 RARBP10826 455 aa21.96■■□□□ 1.11
CHMP1A-203ENST00000547614 AKR1A1P14550 325 aa21.96■■□□□ 1.11
CHMP1A-203ENST00000547614 CCDC96Q2M329 555 aa21.96■■□□□ 1.11
CHMP1A-203ENST00000547614 AGBL1Q96MI9 1066 aa21.96■■□□□ 1.11
CHMP1A-203ENST00000547614 GDF15Q99988 308 aa21.96■■□□□ 1.11
CHMP1A-203ENST00000547614 ZMYND8Q9ULU4 1186 aaPredicted RBP21.96■■□□□ 1.11
CHMP1A-203ENST00000547614 MTMR7Q9Y216 660 aa21.96■■□□□ 1.11
CHMP1A-203ENST00000547614 SNAI1O95863 264 aaPredicted RBP21.95■■□□□ 1.1
CHMP1A-203ENST00000547614 GSPT1P15170 499 aaKnown RBP21.95■■□□□ 1.1
CHMP1A-203ENST00000547614 TAL1P17542 331 aaPredicted RBP21.95■■□□□ 1.1
CHMP1A-203ENST00000547614 BMP8BP34820 402 aa21.95■■□□□ 1.1
CHMP1A-203ENST00000547614 LRRC41Q15345 812 aa21.95■■□□□ 1.1
CHMP1A-203ENST00000547614 CCDC178Q5BJE1 867 aa21.95■■□□□ 1.1
CHMP1A-203ENST00000547614 RASGRP2Q7LDG7 609 aa21.95■■□□□ 1.1
CHMP1A-203ENST00000547614 DGKHQ86XP1 1220 aa21.95■■□□□ 1.1
CHMP1A-203ENST00000547614 TRERF1Q96PN7 1200 aa21.95■■□□□ 1.1
CHMP1A-203ENST00000547614 XPNPEP3Q9NQH7 507 aa21.95■■□□□ 1.1
CHMP1A-203ENST00000547614 HOMER2Q9NSB8 354 aa21.95■■□□□ 1.1
CHMP1A-203ENST00000547614 RNF146Q9NTX7 359 aa21.95■■□□□ 1.1
CHMP1A-203ENST00000547614 PDHBP11177 359 aa21.94■■□□□ 1.1
CHMP1A-203ENST00000547614 IMMTQ16891 758 aaKnown RBP21.94■■□□□ 1.1
CHMP1A-203ENST00000547614 IQCA1Q86XH1 822 aa21.94■■□□□ 1.1
CHMP1A-203ENST00000547614 ABHD16BQ9H3Z7 469 aa21.94■■□□□ 1.1
CHMP1A-203ENST00000547614 NEDD4P46934 1319 aa21.94■■□□□ 1.1
CHMP1A-203ENST00000547614 POTEB2H3BUK9 544 aa21.93■■□□□ 1.1
CHMP1A-203ENST00000547614 ICAM1P05362 532 aa21.93■■□□□ 1.1
CHMP1A-203ENST00000547614 SNHG28P0DPA3 235 aa21.93■■□□□ 1.1
CHMP1A-203ENST00000547614 ALAS1P13196 640 aa21.93■■□□□ 1.1
CHMP1A-203ENST00000547614 SYN1P17600 705 aa21.93■■□□□ 1.1
CHMP1A-203ENST00000547614 TTBK2Q6IQ55 1244 aa21.93■■□□□ 1.1
CHMP1A-203ENST00000547614 CCDC174Q6PII3 467 aa21.93■■□□□ 1.1
CHMP1A-203ENST00000547614 RNF180Q86T96 592 aa21.93■■□□□ 1.1
CHMP1A-203ENST00000547614 FAM133AQ8N9E0 248 aa21.93■■□□□ 1.1
CHMP1A-203ENST00000547614 FGD4Q96M96 766 aa21.93■■□□□ 1.1
CHMP1A-203ENST00000547614 RANBP17Q9H2T7 1088 aaKnown RBP21.93■■□□□ 1.1
CHMP1A-203ENST00000547614 A1CFQ9NQ94 594 aaKnown RBP21.93■■□□□ 1.1
CHMP1A-203ENST00000547614 FAM184BQ9ULE4 1060 aa21.93■■□□□ 1.1
CHMP1A-203ENST00000547614 RAD50Q92878 1312 aa21.92■■□□□ 1.1
CHMP1A-203ENST00000547614 ATN1P54259 1190 aaPredicted RBP21.92■■□□□ 1.1
CHMP1A-203ENST00000547614 SYDE2Q5VT97 1194 aa21.92■■□□□ 1.1
CHMP1A-203ENST00000547614 SLC39A5Q6ZMH5 540 aa21.92■■□□□ 1.1
CHMP1A-203ENST00000547614 RUFY2Q8WXA3 655 aa21.92■■□□□ 1.1
CHMP1A-203ENST00000547614 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.92■■□□□ 1.1
CHMP1A-203ENST00000547614 PNMA2Q9UL42 364 aa21.92■■□□□ 1.1
CHMP1A-203ENST00000547614 CCPG1Q9ULG6 757 aa21.92■■□□□ 1.1
CHMP1A-203ENST00000547614 LAMA4Q16363 1823 aa21.92■■□□□ 1.1
CHMP1A-203ENST00000547614 KDM4AO75164 1064 aa21.91■■□□□ 1.1
CHMP1A-203ENST00000547614 MYCNP04198 464 aaPredicted RBP21.91■■□□□ 1.1
CHMP1A-203ENST00000547614 SLC16A2P36021 539 aa21.91■■□□□ 1.1
CHMP1A-203ENST00000547614 ADCYAP1R1P41586 468 aa21.91■■□□□ 1.1
CHMP1A-203ENST00000547614 SNAP25P60880 206 aa21.91■■□□□ 1.1
CHMP1A-203ENST00000547614 ZNF543Q08ER8 600 aa21.91■■□□□ 1.1
CHMP1A-203ENST00000547614 ACVR2BQ13705 512 aa21.91■■□□□ 1.1
CHMP1A-203ENST00000547614 ANKS1AQ92625 1134 aa21.91■■□□□ 1.1
CHMP1A-203ENST00000547614 KRT23Q9C075 422 aa21.91■■□□□ 1.1
CHMP1A-203ENST00000547614 CNNM2Q9H8M5 875 aa21.91■■□□□ 1.1
CHMP1A-203ENST00000547614 GPCPD1Q9NPB8 672 aa21.91■■□□□ 1.1
CHMP1A-203ENST00000547614 PHF24Q9UPV7 400 aa21.91■■□□□ 1.1
CHMP1A-203ENST00000547614 FRMPD2Q68DX3 1309 aaPredicted RBP21.9■■□□□ 1.1
CHMP1A-203ENST00000547614 DNAH12Q6ZR08 3092 aa21.9■■□□□ 1.1
CHMP1A-203ENST00000547614 PGK1P00558 417 aa21.9■■□□□ 1.1
CHMP1A-203ENST00000547614 MAGEA10P43363 369 aaPredicted RBP21.9■■□□□ 1.1
CHMP1A-203ENST00000547614 CNTN2Q02246 1040 aa21.9■■□□□ 1.1
CHMP1A-203ENST00000547614 SNX17Q15036 470 aa21.9■■□□□ 1.1
CHMP1A-203ENST00000547614 GPATCH4Q5T3I0 446 aaKnown RBP21.9■■□□□ 1.1
CHMP1A-203ENST00000547614 C1orf53Q5VUE5 145 aa21.9■■□□□ 1.1
CHMP1A-203ENST00000547614 ARMCX2Q7L311 632 aa21.9■■□□□ 1.1
CHMP1A-203ENST00000547614 ZKSCAN3Q9BRR0 538 aa21.9■■□□□ 1.1
CHMP1A-203ENST00000547614 IL25Q9H293 177 aa21.9■■□□□ 1.1
CHMP1A-203ENST00000547614 ZSWIM5Q9P217 1185 aa21.9■■□□□ 1.1
CHMP1A-203ENST00000547614 PCDH10Q9P2E7 1040 aa21.9■■□□□ 1.1
CHMP1A-203ENST00000547614 ZHX1Q9UKY1 873 aaPredicted RBP21.9■■□□□ 1.1
CHMP1A-203ENST00000547614 ASB14A6NK59 587 aa21.89■■□□□ 1.09
CHMP1A-203ENST00000547614 B4E1Z4 1266 aa21.89■■□□□ 1.09
CHMP1A-203ENST00000547614 ADAMTS4O75173 837 aa21.89■■□□□ 1.09
CHMP1A-203ENST00000547614 DUSP11O75319 330 aaKnown RBP21.89■■□□□ 1.09
CHMP1A-203ENST00000547614 CHMLP26374 656 aa21.89■■□□□ 1.09
CHMP1A-203ENST00000547614 RTP1P59025 263 aa21.89■■□□□ 1.09
CHMP1A-203ENST00000547614 MUM1L1Q5H9M0 696 aa21.89■■□□□ 1.09
CHMP1A-203ENST00000547614 CCDC144CPQ8IYA2 1237 aa21.89■■□□□ 1.09
CHMP1A-203ENST00000547614 ZSCAN10Q96SZ4 725 aaPredicted RBP21.89■■□□□ 1.09
CHMP1A-203ENST00000547614 TSEN34Q9BSV6 310 aaKnown RBP21.89■■□□□ 1.09
CHMP1A-203ENST00000547614 CYP39A1Q9NYL5 469 aa21.89■■□□□ 1.09
CHMP1A-203ENST00000547614 SOWAHBA6NEL2 793 aa21.88■■□□□ 1.09
CHMP1A-203ENST00000547614 PNMA1Q8ND90 353 aa21.88■■□□□ 1.09
CHMP1A-203ENST00000547614 CCDC144BQ3MJ40 725 aa21.87■■□□□ 1.09
CHMP1A-203ENST00000547614 KLHDC9Q8NEP7 349 aa21.87■■□□□ 1.09
CHMP1A-203ENST00000547614 FERMT2Q96AC1 680 aa21.87■■□□□ 1.09
CHMP1A-203ENST00000547614 KATNBL1Q9H079 304 aa21.87■■□□□ 1.09
CHMP1A-203ENST00000547614 KAT14Q9H8E8 782 aa21.87■■□□□ 1.09
CHMP1A-203ENST00000547614 ATP11BQ9Y2G3 1177 aa21.87■■□□□ 1.09
CHMP1A-203ENST00000547614 SYNRGQ9UMZ2 1314 aa21.86■■□□□ 1.09
CHMP1A-203ENST00000547614 NSMFQ6X4W1 530 aa21.86■■□□□ 1.09
CHMP1A-203ENST00000547614 ENAHQ8N8S7 591 aaPredicted RBP21.86■■□□□ 1.09
CHMP1A-203ENST00000547614 LENG1Q96BZ8 264 aaPredicted RBP21.86■■□□□ 1.09
CHMP1A-203ENST00000547614 PRKAG2Q9UGJ0 569 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms