RNA–Protein interactions for RNA: ENST00000547148.5

PFKM-208, Transcript of phosphofructokinase, muscle, human

TSL 3

Gene PFKM, Length 775 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-208	ENST00000547148	LBX2	Q6XYB7	198 aa		13.81	□□□□□ -0.2
PFKM-208	ENST00000547148	HOMER1	Q86YM7	354 aa		13.81	□□□□□ -0.2
PFKM-208	ENST00000547148	REPS2	Q8NFH8	660 aa		13.81	□□□□□ -0.2
PFKM-208	ENST00000547148	ATG4C	Q96DT6	458 aa		13.81	□□□□□ -0.2
PFKM-208	ENST00000547148	DDX11	Q96FC9	970 aa		13.81	□□□□□ -0.2
PFKM-208	ENST00000547148	SLC38A10	Q9HBR0	1119 aa		13.81	□□□□□ -0.2
PFKM-208	ENST00000547148	ZCCHC17	Q9NP64	241 aa	Known RBP	13.81	□□□□□ -0.2
PFKM-208	ENST00000547148	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	13.81	□□□□□ -0.2
PFKM-208	ENST00000547148		V9GY48	417 aa	Predicted RBP	13.81	□□□□□ -0.2
PFKM-208	ENST00000547148	VWA5A	O00534	786 aa		13.8	□□□□□ -0.2
PFKM-208	ENST00000547148	ZBTB5	O15062	677 aa		13.8	□□□□□ -0.2
PFKM-208	ENST00000547148	PPP1R11	O60927	126 aa	Predicted RBP	13.8	□□□□□ -0.2
PFKM-208	ENST00000547148	CYP2C8	P10632	490 aa		13.8	□□□□□ -0.2
PFKM-208	ENST00000547148	TM4SF4	P48230	202 aa		13.8	□□□□□ -0.2
PFKM-208	ENST00000547148	INHBE	P58166	350 aa		13.8	□□□□□ -0.2
PFKM-208	ENST00000547148	SNAP25	P60880	206 aa		13.8	□□□□□ -0.2
PFKM-208	ENST00000547148	HERVK_113	P62684	666 aa		13.8	□□□□□ -0.2
PFKM-208	ENST00000547148	IRX3	P78415	501 aa	Predicted RBP	13.8	□□□□□ -0.2
PFKM-208	ENST00000547148	HMGN5	P82970	282 aa	Known RBP	13.8	□□□□□ -0.2
PFKM-208	ENST00000547148	QRICH1	Q2TAL8	776 aa		13.8	□□□□□ -0.2
PFKM-208	ENST00000547148	IFNL1	Q8IU54	200 aa		13.8	□□□□□ -0.2
PFKM-208	ENST00000547148	TRIM22	Q8IYM9	498 aa		13.8	□□□□□ -0.2
PFKM-208	ENST00000547148	PIBF1	Q8WXW3	757 aa		13.8	□□□□□ -0.2
PFKM-208	ENST00000547148	RRP36	Q96EU6	259 aa	Known RBP	13.8	□□□□□ -0.2
PFKM-208	ENST00000547148	P2RX7	Q99572	595 aa	Known RBP	13.8	□□□□□ -0.2
PFKM-208	ENST00000547148	VAT1L	Q9HCJ6	419 aa		13.8	□□□□□ -0.2
PFKM-208	ENST00000547148	FOXD4L1	Q9NU39	408 aa		13.8	□□□□□ -0.2
PFKM-208	ENST00000547148	HOXC10	Q9NYD6	342 aa		13.8	□□□□□ -0.2
PFKM-208	ENST00000547148	RBM27	Q9P2N5	1060 aa	Known RBP	13.8	□□□□□ -0.2
PFKM-208	ENST00000547148	ORC3	Q9UBD5	711 aa	Predicted RBP	13.8	□□□□□ -0.2
PFKM-208	ENST00000547148	PNMA3	Q9UL41	463 aa		13.8	□□□□□ -0.2
PFKM-208	ENST00000547148	ZNF536	O15090	1300 aa		13.8	□□□□□ -0.2
PFKM-208	ENST00000547148	PNMA6F	A0A0J9YX94	578 aa		13.79	□□□□□ -0.2
PFKM-208	ENST00000547148	DEXI	O95424	95 aa		13.79	□□□□□ -0.2
PFKM-208	ENST00000547148	OSBP	P22059	807 aa		13.79	□□□□□ -0.2
PFKM-208	ENST00000547148	GJB2	P29033	226 aa		13.79	□□□□□ -0.2
PFKM-208	ENST00000547148	SOX10	P56693	466 aa		13.79	□□□□□ -0.2
PFKM-208	ENST00000547148	PFKFB3	Q16875	520 aa	Predicted RBP	13.79	□□□□□ -0.2
PFKM-208	ENST00000547148	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.79	□□□□□ -0.2
PFKM-208	ENST00000547148	SHISA4	Q96DD7	197 aa		13.79	□□□□□ -0.2
PFKM-208	ENST00000547148	AIFM3	Q96NN9	605 aa		13.79	□□□□□ -0.2
PFKM-208	ENST00000547148	PARK7	Q99497	189 aa	Known RBP	13.79	□□□□□ -0.2
PFKM-208	ENST00000547148	SMC3	Q9UQE7	1217 aa		13.79	□□□□□ -0.2
PFKM-208	ENST00000547148	ADGRA2	Q96PE1	1338 aa		13.79	□□□□□ -0.2
PFKM-208	ENST00000547148	CNMD	O75829	334 aa		13.78	□□□□□ -0.2
PFKM-208	ENST00000547148	FDX1	P10109	184 aa		13.78	□□□□□ -0.2
PFKM-208	ENST00000547148	SCG2	P13521	617 aa		13.78	□□□□□ -0.2
PFKM-208	ENST00000547148	TAL1	P17542	331 aa	Predicted RBP	13.78	□□□□□ -0.2
PFKM-208	ENST00000547148	WWC2	Q6AWC2	1192 aa		13.78	□□□□□ -0.2
PFKM-208	ENST00000547148	CCDC174	Q6PII3	467 aa		13.78	□□□□□ -0.2
PFKM-208	ENST00000547148	IPO9	Q96P70	1041 aa	Known RBP	13.78	□□□□□ -0.2
PFKM-208	ENST00000547148	SEC63	Q9UGP8	760 aa	Known RBP	13.78	□□□□□ -0.2
PFKM-208	ENST00000547148	ZNF214	Q9UL59	606 aa	Predicted RBP	13.78	□□□□□ -0.2
PFKM-208	ENST00000547148	ATP2A1	O14983	1001 aa		13.77	□□□□□ -0.21
PFKM-208	ENST00000547148	ZBED4	O75132	1171 aa		13.77	□□□□□ -0.21
PFKM-208	ENST00000547148	ICAM1	P05362	532 aa		13.77	□□□□□ -0.21
PFKM-208	ENST00000547148	HSP90AA1	P07900	732 aa	Known RBP	13.77	□□□□□ -0.21
PFKM-208	ENST00000547148	OAZ1	P54368	228 aa		13.77	□□□□□ -0.21
PFKM-208	ENST00000547148	AKAP17A	Q02040	695 aa	Known RBP	13.77	□□□□□ -0.21
PFKM-208	ENST00000547148	TMEM132B	Q14DG7	1078 aa		13.77	□□□□□ -0.21
PFKM-208	ENST00000547148	TYW1B	Q6NUM6	668 aa		13.77	□□□□□ -0.21
PFKM-208	ENST00000547148	HEATR3	Q7Z4Q2	680 aa		13.77	□□□□□ -0.21
PFKM-208	ENST00000547148	REM2	Q8IYK8	340 aa	Predicted RBP	13.77	□□□□□ -0.21
PFKM-208	ENST00000547148	MB21D1	Q8N884	522 aa		13.77	□□□□□ -0.21
PFKM-208	ENST00000547148	SPRYD3	Q8NCJ5	442 aa		13.77	□□□□□ -0.21
PFKM-208	ENST00000547148	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.77	□□□□□ -0.21
PFKM-208	ENST00000547148	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.77	□□□□□ -0.21
PFKM-208	ENST00000547148	TXNRD2	Q9NNW7	524 aa		13.77	□□□□□ -0.21
PFKM-208	ENST00000547148	BTBD7	Q9P203	1132 aa		13.77	□□□□□ -0.21
PFKM-208	ENST00000547148	CASP8AP2	Q9UKL3	1982 aa		13.76	□□□□□ -0.21
PFKM-208	ENST00000547148	hCG_1984214	I3L0E3	225 aa		13.76	□□□□□ -0.21
PFKM-208	ENST00000547148	STXBP3	O00186	592 aa		13.76	□□□□□ -0.21
PFKM-208	ENST00000547148	PEX10	O60683	326 aa		13.76	□□□□□ -0.21
PFKM-208	ENST00000547148	OTUD7B	Q6GQQ9	843 aa		13.76	□□□□□ -0.21
PFKM-208	ENST00000547148	FBXO11	Q86XK2	927 aa		13.76	□□□□□ -0.21
PFKM-208	ENST00000547148	ZNF713	Q8N859	430 aa	Predicted RBP	13.76	□□□□□ -0.21
PFKM-208	ENST00000547148	FAM184A	Q8NB25	1140 aa		13.76	□□□□□ -0.21
PFKM-208	ENST00000547148	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.76	□□□□□ -0.21
PFKM-208	ENST00000547148	WASF1	Q92558	559 aa		13.76	□□□□□ -0.21
PFKM-208	ENST00000547148	AGBL1	Q96MI9	1066 aa		13.76	□□□□□ -0.21
PFKM-208	ENST00000547148	ALG1	Q9BT22	464 aa		13.76	□□□□□ -0.21
PFKM-208	ENST00000547148	AMN	Q9BXJ7	453 aa		13.76	□□□□□ -0.21
PFKM-208	ENST00000547148	RAVER2	Q9HCJ3	691 aa	Known RBP	13.76	□□□□□ -0.21
PFKM-208	ENST00000547148	BARHL2	Q9NY43	387 aa		13.76	□□□□□ -0.21
PFKM-208	ENST00000547148	RBPJL	Q9UBG7	517 aa		13.76	□□□□□ -0.21
PFKM-208	ENST00000547148	DDIT3	P35638	169 aa		13.75	□□□□□ -0.21
PFKM-208	ENST00000547148	GCLC	P48506	637 aa	Predicted RBP	13.75	□□□□□ -0.21
PFKM-208	ENST00000547148	TAF1C	Q15572	869 aa	Predicted RBP	13.75	□□□□□ -0.21
PFKM-208	ENST00000547148	PPP1R18	Q6NYC8	613 aa		13.75	□□□□□ -0.21
PFKM-208	ENST00000547148	CPXCR1	Q8N123	301 aa		13.75	□□□□□ -0.21
PFKM-208	ENST00000547148	COA7	Q96BR5	231 aa		13.75	□□□□□ -0.21
PFKM-208	ENST00000547148	PAGR1	Q9BTK6	254 aa		13.75	□□□□□ -0.21
PFKM-208	ENST00000547148	TEX13B	Q9BXU2	312 aa		13.75	□□□□□ -0.21
PFKM-208	ENST00000547148	GJB4	Q9NTQ9	266 aa		13.75	□□□□□ -0.21
PFKM-208	ENST00000547148	VPS54	Q9P1Q0	977 aa		13.75	□□□□□ -0.21
PFKM-208	ENST00000547148	CCPG1	Q9ULG6	757 aa		13.75	□□□□□ -0.21
PFKM-208	ENST00000547148	RABGAP1	Q9Y3P9	1069 aa		13.75	□□□□□ -0.21
PFKM-208	ENST00000547148	KIF3A	Q9Y496	699 aa		13.75	□□□□□ -0.21
PFKM-208	ENST00000547148	PCDHA1	Q9Y5I3	950 aa		13.75	□□□□□ -0.21
PFKM-208	ENST00000547148	BAZ2B	Q9UIF8	2168 aa	Known RBP	13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms