RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 INHBEP58166 350 aa18.25■□□□□ 0.51
TRAFD1-203ENST00000547063 DGKZQ13574 1117 aa18.25■□□□□ 0.51
TRAFD1-203ENST00000547063 CCL15Q16663 113 aa18.25■□□□□ 0.51
TRAFD1-203ENST00000547063 QRICH1Q2TAL8 776 aa18.25■□□□□ 0.51
TRAFD1-203ENST00000547063 GALNT17Q6IS24 598 aa18.25■□□□□ 0.51
TRAFD1-203ENST00000547063 FBXO11Q86XK2 927 aa18.25■□□□□ 0.51
TRAFD1-203ENST00000547063 MB21D1Q8N884 522 aa18.25■□□□□ 0.51
TRAFD1-203ENST00000547063 MS4A4AQ96JQ5 239 aa18.25■□□□□ 0.51
TRAFD1-203ENST00000547063 GLT8D2Q9H1C3 349 aa18.25■□□□□ 0.51
TRAFD1-203ENST00000547063 CREBZFQ9NS37 354 aa18.25■□□□□ 0.51
TRAFD1-203ENST00000547063 FBXO28Q9NVF7 368 aa18.25■□□□□ 0.51
TRAFD1-203ENST00000547063 PARP14Q460N5 1801 aa18.24■□□□□ 0.51
TRAFD1-203ENST00000547063 DTNBO60941 627 aa18.24■□□□□ 0.51
TRAFD1-203ENST00000547063 TREML2Q5T2D2 321 aa18.24■□□□□ 0.51
TRAFD1-203ENST00000547063 KRT40Q6A162 431 aa18.24■□□□□ 0.51
TRAFD1-203ENST00000547063 SAMD1Q6SPF0 538 aaPredicted RBP18.24■□□□□ 0.51
TRAFD1-203ENST00000547063 ANKRD23Q86SG2 305 aa18.24■□□□□ 0.51
TRAFD1-203ENST00000547063 TEX2Q8IWB9 1127 aa18.24■□□□□ 0.51
TRAFD1-203ENST00000547063 GTF3C2Q8WUA4 911 aaPredicted RBP18.24■□□□□ 0.51
TRAFD1-203ENST00000547063 ESYT2A0FGR8 921 aa18.23■□□□□ 0.51
TRAFD1-203ENST00000547063 GNA11P29992 359 aa18.23■□□□□ 0.51
TRAFD1-203ENST00000547063 OAZ1P54368 228 aa18.23■□□□□ 0.51
TRAFD1-203ENST00000547063 NAPAP54920 295 aa18.23■□□□□ 0.51
TRAFD1-203ENST00000547063 MOGSQ13724 837 aa18.23■□□□□ 0.51
TRAFD1-203ENST00000547063 WWC2Q6AWC2 1192 aa18.23■□□□□ 0.51
TRAFD1-203ENST00000547063 AIFM3Q96NN9 605 aa18.23■□□□□ 0.51
TRAFD1-203ENST00000547063 SLC38A10Q9HBR0 1119 aa18.23■□□□□ 0.51
TRAFD1-203ENST00000547063 VPS54Q9P1Q0 977 aa18.23■□□□□ 0.51
TRAFD1-203ENST00000547063 ADAMTS5Q9UNA0 930 aa18.23■□□□□ 0.51
TRAFD1-203ENST00000547063 PCDHA1Q9Y5I3 950 aa18.23■□□□□ 0.51
TRAFD1-203ENST00000547063 ATP6V1DQ9Y5K8 247 aa18.23■□□□□ 0.51
TRAFD1-203ENST00000547063 TESPA1A2RU30 521 aaPredicted RBP18.22■□□□□ 0.51
TRAFD1-203ENST00000547063 STXBP3O00186 592 aa18.22■□□□□ 0.51
TRAFD1-203ENST00000547063 VWA5AO00534 786 aa18.22■□□□□ 0.51
TRAFD1-203ENST00000547063 BRD1O95696 1058 aa18.22■□□□□ 0.51
TRAFD1-203ENST00000547063 MMP1P03956 469 aa18.22■□□□□ 0.51
TRAFD1-203ENST00000547063 ICAM1P05362 532 aa18.22■□□□□ 0.51
TRAFD1-203ENST00000547063 ZSCAN22P10073 491 aaPredicted RBP18.22■□□□□ 0.51
TRAFD1-203ENST00000547063 NLRP5P59047 1200 aa18.22■□□□□ 0.51
TRAFD1-203ENST00000547063 SREBF2Q12772 1141 aa18.22■□□□□ 0.51
TRAFD1-203ENST00000547063 MKRN3Q13064 507 aaKnown RBP18.22■□□□□ 0.51
TRAFD1-203ENST00000547063 GNL2Q13823 731 aaKnown RBP18.22■□□□□ 0.51
TRAFD1-203ENST00000547063 GPAT2Q6NUI2 795 aa18.22■□□□□ 0.51
TRAFD1-203ENST00000547063 LBX2Q6XYB7 198 aa18.22■□□□□ 0.51
TRAFD1-203ENST00000547063 BICD2Q8TD16 824 aa18.22■□□□□ 0.51
TRAFD1-203ENST00000547063 GPKOWQ92917 476 aaPredicted RBP eCLIP18.22■□□□□ 0.51
TRAFD1-203ENST00000547063 PHF20Q9BVI0 1012 aa18.22■□□□□ 0.51
TRAFD1-203ENST00000547063 ASCC2Q9H1I8 757 aaPredicted RBP18.22■□□□□ 0.51
TRAFD1-203ENST00000547063 ZSCAN16Q9H4T2 348 aaPredicted RBP18.22■□□□□ 0.51
TRAFD1-203ENST00000547063 C6orf50Q9HD87 102 aa18.22■□□□□ 0.51
TRAFD1-203ENST00000547063 ZCCHC17Q9NP64 241 aaKnown RBP18.22■□□□□ 0.51
TRAFD1-203ENST00000547063 MTMR6Q9Y217 621 aa18.22■□□□□ 0.51
TRAFD1-203ENST00000547063 ABCB11O95342 1321 aa18.22■□□□□ 0.51
TRAFD1-203ENST00000547063 SPDYE16A6NNV3 312 aaPredicted RBP18.21■□□□□ 0.51
TRAFD1-203ENST00000547063 FOSBP53539 338 aa18.21■□□□□ 0.51
TRAFD1-203ENST00000547063 OTUD7BQ6GQQ9 843 aa18.21■□□□□ 0.51
TRAFD1-203ENST00000547063 BRI3BPQ8WY22 251 aa18.21■□□□□ 0.51
TRAFD1-203ENST00000547063 ATG4CQ96DT6 458 aa18.21■□□□□ 0.51
TRAFD1-203ENST00000547063 ZMYND12Q9H0C1 365 aa18.21■□□□□ 0.51
TRAFD1-203ENST00000547063 MRPL11Q9Y3B7 192 aaKnown RBP18.21■□□□□ 0.51
TRAFD1-203ENST00000547063 RLFQ13129 1914 aa18.21■□□□□ 0.51
TRAFD1-203ENST00000547063 RASSF10A6NK89 507 aa18.2■□□□□ 0.5
TRAFD1-203ENST00000547063 ATP2A1O14983 1001 aa18.2■□□□□ 0.5
TRAFD1-203ENST00000547063 DEFB115Q30KQ5 88 aa18.2■□□□□ 0.5
TRAFD1-203ENST00000547063 MCTP1Q6DN14 999 aa18.2■□□□□ 0.5
TRAFD1-203ENST00000547063 CCDC174Q6PII3 467 aa18.2■□□□□ 0.5
TRAFD1-203ENST00000547063 PAXIP1Q6ZW49 1069 aaPredicted RBP18.2■□□□□ 0.5
TRAFD1-203ENST00000547063 REM2Q8IYK8 340 aaPredicted RBP18.2■□□□□ 0.5
TRAFD1-203ENST00000547063 DAGLBQ8NCG7 672 aa18.2■□□□□ 0.5
TRAFD1-203ENST00000547063 FOXP1Q9H334 677 aaPredicted RBP18.2■□□□□ 0.5
TRAFD1-203ENST00000547063 CCPG1Q9ULG6 757 aa18.2■□□□□ 0.5
TRAFD1-203ENST00000547063 SMCO2A6NFE2 343 aa18.19■□□□□ 0.5
TRAFD1-203ENST00000547063 BTBD19C9JJ37 291 aa18.19■□□□□ 0.5
TRAFD1-203ENST00000547063 PDHXO00330 501 aa18.19■□□□□ 0.5
TRAFD1-203ENST00000547063 PPP1R11O60927 126 aaPredicted RBP18.19■□□□□ 0.5
TRAFD1-203ENST00000547063 F13A1P00488 732 aa18.19■□□□□ 0.5
TRAFD1-203ENST00000547063 KRT2P35908 639 aa18.19■□□□□ 0.5
TRAFD1-203ENST00000547063 ADCY7P51828 1080 aa18.19■□□□□ 0.5
TRAFD1-203ENST00000547063 MRPL12P52815 198 aaKnown RBP18.19■□□□□ 0.5
TRAFD1-203ENST00000547063 HERVK_113P62684 666 aa18.19■□□□□ 0.5
TRAFD1-203ENST00000547063 GUCY1B3Q02153 619 aa18.19■□□□□ 0.5
TRAFD1-203ENST00000547063 NOGQ13253 232 aa18.19■□□□□ 0.5
TRAFD1-203ENST00000547063 TKFCQ3LXA3 575 aa18.19■□□□□ 0.5
TRAFD1-203ENST00000547063 MCTP2Q6DN12 878 aa18.19■□□□□ 0.5
TRAFD1-203ENST00000547063 BRAPQ7Z569 592 aa18.19■□□□□ 0.5
TRAFD1-203ENST00000547063 COA7Q96BR5 231 aa18.19■□□□□ 0.5
TRAFD1-203ENST00000547063 PARK7Q99497 189 aaKnown RBP18.19■□□□□ 0.5
TRAFD1-203ENST00000547063 P2RX7Q99572 595 aaKnown RBP18.19■□□□□ 0.5
TRAFD1-203ENST00000547063 MAF1Q9H063 256 aa18.19■□□□□ 0.5
TRAFD1-203ENST00000547063 PCDHA4Q9UN74 947 aa18.19■□□□□ 0.5
TRAFD1-203ENST00000547063 KCNJ14Q9UNX9 436 aa18.19■□□□□ 0.5
TRAFD1-203ENST00000547063 FAM155AB1AL88 458 aaPredicted RBP18.18■□□□□ 0.5
TRAFD1-203ENST00000547063 COPB2P35606 906 aa18.18■□□□□ 0.5
TRAFD1-203ENST00000547063 GCLCP48506 637 aaPredicted RBP18.18■□□□□ 0.5
TRAFD1-203ENST00000547063 SNAP25P60880 206 aa18.18■□□□□ 0.5
TRAFD1-203ENST00000547063 PKP1Q13835 747 aa18.18■□□□□ 0.5
TRAFD1-203ENST00000547063 USH1GQ495M9 461 aa18.18■□□□□ 0.5
TRAFD1-203ENST00000547063 DIS3L2Q8IYB7 885 aaKnown RBP18.18■□□□□ 0.5
TRAFD1-203ENST00000547063 BLIDQ8IZY5 108 aa18.18■□□□□ 0.5
TRAFD1-203ENST00000547063 SAMD3Q8N6K7 520 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms