RNA–Protein interactions for RNA: ENST00000546983.1

NKX2-1-205, Transcript of NK2 homeobox 1, humanhuman

TSL 4

Gene NKX2-1, Length 653 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-205ENST00000546983 BLOC1S2Q6QNY1 142 aa29.65■■■□□ 2.34
NKX2-1-205ENST00000546983 CHST3Q7LGC8 479 aa29.65■■■□□ 2.34
NKX2-1-205ENST00000546983 SGMS1Q86VZ5 419 aa29.65■■■□□ 2.34
NKX2-1-205ENST00000546983 RASEFQ8IZ41 740 aa29.65■■■□□ 2.34
NKX2-1-205ENST00000546983 SLC12A7Q9Y666 1083 aa29.65■■■□□ 2.34
NKX2-1-205ENST00000546983 SMARCA1P28370 1054 aa29.64■■■□□ 2.34
NKX2-1-205ENST00000546983 SLC16A2P36021 539 aa29.64■■■□□ 2.34
NKX2-1-205ENST00000546983 FGD1P98174 961 aa29.64■■■□□ 2.34
NKX2-1-205ENST00000546983 TROAPQ12815 778 aa29.64■■■□□ 2.34
NKX2-1-205ENST00000546983 GRM4Q14833 912 aa29.64■■■□□ 2.34
NKX2-1-205ENST00000546983 MFSD14CQ5VZR4 134 aa29.64■■■□□ 2.34
NKX2-1-205ENST00000546983 OLFML2BQ68BL8 750 aa29.64■■■□□ 2.34
NKX2-1-205ENST00000546983 DDX11Q96FC9 970 aa29.64■■■□□ 2.34
NKX2-1-205ENST00000546983 CCPG1Q9ULG6 757 aa29.64■■■□□ 2.34
NKX2-1-205ENST00000546983 SNX14Q9Y5W7 946 aa29.64■■■□□ 2.34
NKX2-1-205ENST00000546983 KLRF2D3W0D1 207 aa29.63■■■□□ 2.33
NKX2-1-205ENST00000546983 RCAN1P53805 252 aa29.63■■■□□ 2.33
NKX2-1-205ENST00000546983 EXOSC10Q01780 885 aaKnown RBP29.63■■■□□ 2.33
NKX2-1-205ENST00000546983 ZNF654Q8IZM8 581 aa29.63■■■□□ 2.33
NKX2-1-205ENST00000546983 SH3TC2Q8TF17 1288 aa29.63■■■□□ 2.33
NKX2-1-205ENST00000546983 ZNF236Q9UL36 1845 aa29.63■■■□□ 2.33
NKX2-1-205ENST00000546983 PFASO15067 1338 aa29.63■■■□□ 2.33
NKX2-1-205ENST00000546983 PALM3A6NDB9 673 aaPredicted RBP29.62■■■□□ 2.33
NKX2-1-205ENST00000546983 DHX16O60231 1041 aaKnown RBP29.62■■■□□ 2.33
NKX2-1-205ENST00000546983 ANAPC15P60006 121 aa29.62■■■□□ 2.33
NKX2-1-205ENST00000546983 PPP2R5BQ15173 497 aa29.62■■■□□ 2.33
NKX2-1-205ENST00000546983 ANKRD35Q8N283 1001 aa29.62■■■□□ 2.33
NKX2-1-205ENST00000546983 FBXL16Q8N461 479 aa29.62■■■□□ 2.33
NKX2-1-205ENST00000546983 MSL3Q8N5Y2 521 aaKnown RBP29.62■■■□□ 2.33
NKX2-1-205ENST00000546983 CHMP4CQ96CF2 233 aa29.62■■■□□ 2.33
NKX2-1-205ENST00000546983 JAKMIP1Q96N16 626 aaKnown RBP29.62■■■□□ 2.33
NKX2-1-205ENST00000546983 GOLGA8HP0CJ92 632 aa29.61■■■□□ 2.33
NKX2-1-205ENST00000546983 CCDC174Q6PII3 467 aa29.61■■■□□ 2.33
NKX2-1-205ENST00000546983 TM6SF1Q9BZW5 370 aa29.61■■■□□ 2.33
NKX2-1-205ENST00000546983 RNF146Q9NTX7 359 aa29.61■■■□□ 2.33
NKX2-1-205ENST00000546983 MAD2L2Q9UI95 211 aa29.61■■■□□ 2.33
NKX2-1-205ENST00000546983 ZNF536O15090 1300 aa29.61■■■□□ 2.33
NKX2-1-205ENST00000546983 ZSWIM8A7E2V4 1837 aa29.61■■■□□ 2.33
NKX2-1-205ENST00000546983 INHAP05111 366 aa29.6■■■□□ 2.33
NKX2-1-205ENST00000546983 ALAS1P13196 640 aa29.6■■■□□ 2.33
NKX2-1-205ENST00000546983 SLC4A3P48751 1232 aa29.6■■■□□ 2.33
NKX2-1-205ENST00000546983 ADCK5Q3MIX3 580 aa29.6■■■□□ 2.33
NKX2-1-205ENST00000546983 RASGRP2Q7LDG7 609 aa29.6■■■□□ 2.33
NKX2-1-205ENST00000546983 ADGRF4Q8IZF3 695 aa29.6■■■□□ 2.33
NKX2-1-205ENST00000546983 TRERF1Q96PN7 1200 aa29.6■■■□□ 2.33
NKX2-1-205ENST00000546983 RIPK3Q9Y572 518 aa29.6■■■□□ 2.33
NKX2-1-205ENST00000546983 ELNP15502 786 aa29.59■■■□□ 2.33
NKX2-1-205ENST00000546983 NUP133Q8WUM0 1156 aa29.59■■■□□ 2.33
NKX2-1-205ENST00000546983 AGBL1Q96MI9 1066 aa29.59■■■□□ 2.33
NKX2-1-205ENST00000546983 UBA5Q9GZZ9 404 aa29.59■■■□□ 2.33
NKX2-1-205ENST00000546983 HMX1Q9NP08 348 aaPredicted RBP29.59■■■□□ 2.33
NKX2-1-205ENST00000546983 NRBP1Q9UHY1 535 aa29.59■■■□□ 2.33
NKX2-1-205ENST00000546983 RPTORQ8N122 1335 aa29.59■■■□□ 2.33
NKX2-1-205ENST00000546983 ZNF467Q7Z7K2 595 aaPredicted RBP29.58■■■□□ 2.33
NKX2-1-205ENST00000546983 TRIB2Q92519 343 aa29.58■■■□□ 2.33
NKX2-1-205ENST00000546983 CDC37Q16543 378 aaPredicted RBP29.57■■■□□ 2.32
NKX2-1-205ENST00000546983 RBM28Q9NW13 759 aaKnown RBP29.57■■■□□ 2.32
NKX2-1-205ENST00000546983 ABCB11O95342 1321 aa29.56■■■□□ 2.32
NKX2-1-205ENST00000546983 LOC102724159A0A0B4J2E5 919 aa29.56■■■□□ 2.32
NKX2-1-205ENST00000546983 ZBTB5O15062 677 aa29.56■■■□□ 2.32
NKX2-1-205ENST00000546983 CASTP20810 708 aaKnown RBP29.56■■■□□ 2.32
NKX2-1-205ENST00000546983 RPS6KB1P23443 525 aa29.56■■■□□ 2.32
NKX2-1-205ENST00000546983 PWP2Q15269 919 aaKnown RBP29.56■■■□□ 2.32
NKX2-1-205ENST00000546983 SAMD3Q8N6K7 520 aa29.56■■■□□ 2.32
NKX2-1-205ENST00000546983 RGS22Q8NE09 1264 aa29.56■■■□□ 2.32
NKX2-1-205ENST00000546983 AMNQ9BXJ7 453 aa29.56■■■□□ 2.32
NKX2-1-205ENST00000546983 RNF208Q9H0X6 261 aa29.56■■■□□ 2.32
NKX2-1-205ENST00000546983 RIOX1Q9H6W3 641 aa29.56■■■□□ 2.32
NKX2-1-205ENST00000546983 HOMER2Q9NSB8 354 aa29.56■■■□□ 2.32
NKX2-1-205ENST00000546983 CYP46A1Q9Y6A2 500 aa29.56■■■□□ 2.32
NKX2-1-205ENST00000546983 COL11A1P12107 1806 aaPredicted RBP29.56■■■□□ 2.32
NKX2-1-205ENST00000546983 DNAJC25-GNG10A0A024R161 153 aa29.55■■■□□ 2.32
NKX2-1-205ENST00000546983 CCDC196A0A1B0GTZ2 297 aa29.55■■■□□ 2.32
NKX2-1-205ENST00000546983 COBLO75128 1261 aa29.55■■■□□ 2.32
NKX2-1-205ENST00000546983 GJB1P08034 283 aa29.55■■■□□ 2.32
NKX2-1-205ENST00000546983 CCL5P13501 91 aa29.55■■■□□ 2.32
NKX2-1-205ENST00000546983 ZNF792Q3KQV3 632 aa29.55■■■□□ 2.32
NKX2-1-205ENST00000546983 MAP3K21Q5TCX8 1036 aa29.55■■■□□ 2.32
NKX2-1-205ENST00000546983 FBXO11Q86XK2 927 aa29.55■■■□□ 2.32
NKX2-1-205ENST00000546983 MCF2L2Q86YR7 1114 aa29.55■■■□□ 2.32
NKX2-1-205ENST00000546983 STAG2Q8N3U4 1231 aa29.55■■■□□ 2.32
NKX2-1-205ENST00000546983 MTMR8Q96EF0 704 aa29.55■■■□□ 2.32
NKX2-1-205ENST00000546983 MAML3Q96JK9 1138 aa29.55■■■□□ 2.32
NKX2-1-205ENST00000546983 SPZ1Q9BXG8 430 aa29.55■■■□□ 2.32
NKX2-1-205ENST00000546983 JMJD4Q9H9V9 463 aa29.55■■■□□ 2.32
NKX2-1-205ENST00000546983 ZSWIM6Q9HCJ5 1215 aa29.55■■■□□ 2.32
NKX2-1-205ENST00000546983 MRPL11Q9Y3B7 192 aaKnown RBP29.55■■■□□ 2.32
NKX2-1-205ENST00000546983 MSCO60682 206 aa29.54■■■□□ 2.32
NKX2-1-205ENST00000546983 APOA5Q6Q788 366 aa29.54■■■□□ 2.32
NKX2-1-205ENST00000546983 RUFY3Q7L099 469 aa29.54■■■□□ 2.32
NKX2-1-205ENST00000546983 FANCBQ8NB91 859 aa29.54■■■□□ 2.32
NKX2-1-205ENST00000546983 MPHOSPH6Q99547 160 aaKnown RBP29.54■■■□□ 2.32
NKX2-1-205ENST00000546983 SENP2Q9HC62 589 aa29.54■■■□□ 2.32
NKX2-1-205ENST00000546983 B4DLN1 442 aa29.53■■■□□ 2.32
NKX2-1-205ENST00000546983 POTEB2H3BUK9 544 aa29.53■■■□□ 2.32
NKX2-1-205ENST00000546983 ZBTB43O43298 467 aa29.53■■■□□ 2.32
NKX2-1-205ENST00000546983 MRPL12P52815 198 aaKnown RBP29.53■■■□□ 2.32
NKX2-1-205ENST00000546983 NPLOC4Q8TAT6 608 aa29.53■■■□□ 2.32
NKX2-1-205ENST00000546983 MAP3K20Q9NYL2 800 aaKnown RBP29.53■■■□□ 2.32
NKX2-1-205ENST00000546983 ADD3Q9UEY8 706 aaKnown RBP29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms