RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 SYDE2Q5VT97 1194 aa18.64■□□□□ 0.57
DDX54-204ENST00000546898 PRPF38BQ5VTL8 546 aaKnown RBP18.64■□□□□ 0.57
DDX54-204ENST00000546898 RALYLQ86SE5 291 aaKnown RBP18.64■□□□□ 0.57
DDX54-204ENST00000546898 MSL3Q8N5Y2 521 aaKnown RBP18.64■□□□□ 0.57
DDX54-204ENST00000546898 DDX11Q96FC9 970 aa18.64■□□□□ 0.57
DDX54-204ENST00000546898 HTATIP2Q9BUP3 242 aa18.64■□□□□ 0.57
DDX54-204ENST00000546898 ACAD9Q9H845 621 aa18.64■□□□□ 0.57
DDX54-204ENST00000546898 NRBP1Q9UHY1 535 aa18.64■□□□□ 0.57
DDX54-204ENST00000546898 RBM8AQ9Y5S9 174 aaKnown RBP18.64■□□□□ 0.57
DDX54-204ENST00000546898 FRMPD2Q68DX3 1309 aaPredicted RBP18.64■□□□□ 0.57
DDX54-204ENST00000546898 ALPK3Q96L96 1907 aa18.64■□□□□ 0.57
DDX54-204ENST00000546898 MCM3APO60318 1980 aa18.64■□□□□ 0.57
DDX54-204ENST00000546898 MKI67P46013 3256 aaKnown RBP18.64■□□□□ 0.57
DDX54-204ENST00000546898 DNAJC25-GNG10A0A024R161 153 aa18.63■□□□□ 0.57
DDX54-204ENST00000546898 ICAM1P05362 532 aa18.63■□□□□ 0.57
DDX54-204ENST00000546898 ERICH6BQ5W0A0 696 aa18.63■□□□□ 0.57
DDX54-204ENST00000546898 TTBK2Q6IQ55 1244 aa18.63■□□□□ 0.57
DDX54-204ENST00000546898 CASC1Q6TDU7 716 aa18.63■□□□□ 0.57
DDX54-204ENST00000546898 ANKRD35Q8N283 1001 aa18.63■□□□□ 0.57
DDX54-204ENST00000546898 NCOA7Q8NI08 942 aa18.63■□□□□ 0.57
DDX54-204ENST00000546898 TINF2Q9BSI4 451 aa18.63■□□□□ 0.57
DDX54-204ENST00000546898 LSG1Q9H089 658 aaKnown RBP18.63■□□□□ 0.57
DDX54-204ENST00000546898 GPCPD1Q9NPB8 672 aa18.63■□□□□ 0.57
DDX54-204ENST00000546898 RNF146Q9NTX7 359 aa18.63■□□□□ 0.57
DDX54-204ENST00000546898 DDX20Q9UHI6 824 aaKnown RBP18.63■□□□□ 0.57
DDX54-204ENST00000546898 PNMA2Q9UL42 364 aa18.63■□□□□ 0.57
DDX54-204ENST00000546898 CEP290O15078 2479 aa18.63■□□□□ 0.57
DDX54-204ENST00000546898 E7EWF7 191 aa18.62■□□□□ 0.57
DDX54-204ENST00000546898 ASPRV1Q53RT3 343 aa18.62■□□□□ 0.57
DDX54-204ENST00000546898 IFIT1BQ5T764 474 aaKnown RBP18.62■□□□□ 0.57
DDX54-204ENST00000546898 LHX8Q68G74 356 aa18.62■□□□□ 0.57
DDX54-204ENST00000546898 CCDC174Q6PII3 467 aa18.62■□□□□ 0.57
DDX54-204ENST00000546898 AGBL1Q96MI9 1066 aa18.62■□□□□ 0.57
DDX54-204ENST00000546898 LCTP09848 1927 aa18.62■□□□□ 0.57
DDX54-204ENST00000546898 PFASO15067 1338 aa18.61■□□□□ 0.57
DDX54-204ENST00000546898 SYNGAP1Q96PV0 1343 aa18.61■□□□□ 0.57
DDX54-204ENST00000546898 CDC45O75419 566 aa18.61■□□□□ 0.57
DDX54-204ENST00000546898 ALAS1P13196 640 aa18.61■□□□□ 0.57
DDX54-204ENST00000546898 CNGA1P29973 690 aa18.61■□□□□ 0.57
DDX54-204ENST00000546898 SLC16A2P36021 539 aa18.61■□□□□ 0.57
DDX54-204ENST00000546898 SEC23AQ15436 765 aa18.61■□□□□ 0.57
DDX54-204ENST00000546898 CYB5R4Q7L1T6 521 aa18.61■□□□□ 0.57
DDX54-204ENST00000546898 NECAB2Q7Z6G3 386 aa18.61■□□□□ 0.57
DDX54-204ENST00000546898 ZNF467Q7Z7K2 595 aaPredicted RBP18.61■□□□□ 0.57
DDX54-204ENST00000546898 TRPV1Q8NER1 839 aa18.61■□□□□ 0.57
DDX54-204ENST00000546898 TRERF1Q96PN7 1200 aa18.61■□□□□ 0.57
DDX54-204ENST00000546898 ANO2Q9NQ90 1003 aa18.61■□□□□ 0.57
DDX54-204ENST00000546898 HOMER2Q9NSB8 354 aa18.61■□□□□ 0.57
DDX54-204ENST00000546898 CCPG1Q9ULG6 757 aa18.61■□□□□ 0.57
DDX54-204ENST00000546898 WDR19Q8NEZ3 1342 aa18.6■□□□□ 0.57
DDX54-204ENST00000546898 ERICH2A1L162 156 aa18.6■□□□□ 0.57
DDX54-204ENST00000546898 SEPT4O43236 478 aa18.6■□□□□ 0.57
DDX54-204ENST00000546898 SART3Q15020 963 aaKnown RBP18.6■□□□□ 0.57
DDX54-204ENST00000546898 MAMDC4Q6UXC1 1216 aa18.6■□□□□ 0.57
DDX54-204ENST00000546898 STOX1Q6ZVD7 989 aa18.6■□□□□ 0.57
DDX54-204ENST00000546898 PAWRQ96IZ0 340 aaKnown RBP18.6■□□□□ 0.57
DDX54-204ENST00000546898 LRRC37A2A6NM11 1700 aa18.6■□□□□ 0.57
DDX54-204ENST00000546898 MNX1P50219 401 aaPredicted RBP18.59■□□□□ 0.57
DDX54-204ENST00000546898 SNAP25P60880 206 aa18.59■□□□□ 0.57
DDX54-204ENST00000546898 A1CFQ9NQ94 594 aaKnown RBP18.59■□□□□ 0.57
DDX54-204ENST00000546898 TAF6LQ9Y6J9 622 aa18.59■□□□□ 0.57
DDX54-204ENST00000546898 POTEB2H3BUK9 544 aa18.58■□□□□ 0.56
DDX54-204ENST00000546898 IFIT3O14879 490 aaKnown RBP18.58■□□□□ 0.56
DDX54-204ENST00000546898 PARP1P09874 1014 aaKnown RBP18.58■□□□□ 0.56
DDX54-204ENST00000546898 GOLGA8HP0CJ92 632 aa18.58■□□□□ 0.56
DDX54-204ENST00000546898 MB21D2Q8IYB1 491 aaPredicted RBP18.58■□□□□ 0.56
DDX54-204ENST00000546898 DIS3LQ8TF46 1054 aaKnown RBP18.58■□□□□ 0.56
DDX54-204ENST00000546898 MTA3Q9BTC8 594 aa18.58■□□□□ 0.56
DDX54-204ENST00000546898 C11orf49Q9H6J7 331 aa18.58■□□□□ 0.56
DDX54-204ENST00000546898 CNPY2Q9Y2B0 182 aa18.58■□□□□ 0.56
DDX54-204ENST00000546898 SLC27A2O14975 620 aa18.57■□□□□ 0.56
DDX54-204ENST00000546898 WTAPQ15007 396 aa18.57■□□□□ 0.56
DDX54-204ENST00000546898 NECTIN1Q15223 517 aa18.57■□□□□ 0.56
DDX54-204ENST00000546898 FAM133AQ8N9E0 248 aa18.57■□□□□ 0.56
DDX54-204ENST00000546898 PPP4R2Q9NY27 417 aa18.57■□□□□ 0.56
DDX54-204ENST00000546898 MUM1L1Q5H9M0 696 aa18.56■□□□□ 0.56
DDX54-204ENST00000546898 PRAMEF19Q5SWL8 479 aa18.56■□□□□ 0.56
DDX54-204ENST00000546898 RNF20Q5VTR2 975 aa18.56■□□□□ 0.56
DDX54-204ENST00000546898 CREB3L3Q68CJ9 461 aa18.56■□□□□ 0.56
DDX54-204ENST00000546898 DPF3Q92784 378 aa18.56■□□□□ 0.56
DDX54-204ENST00000546898 FGD4Q96M96 766 aa18.56■□□□□ 0.56
DDX54-204ENST00000546898 CYP39A1Q9NYL5 469 aa18.56■□□□□ 0.56
DDX54-204ENST00000546898 ZNF865P0CJ78 1059 aaPredicted RBP18.55■□□□□ 0.56
DDX54-204ENST00000546898 COL6A1P12109 1028 aa18.55■□□□□ 0.56
DDX54-204ENST00000546898 AKR1A1P14550 325 aa18.55■□□□□ 0.56
DDX54-204ENST00000546898 ANTXR2P58335 489 aa18.55■□□□□ 0.56
DDX54-204ENST00000546898 CDC37Q16543 378 aaPredicted RBP18.55■□□□□ 0.56
DDX54-204ENST00000546898 ARRDC4Q8NCT1 418 aa18.55■□□□□ 0.56
DDX54-204ENST00000546898 UBA5Q9GZZ9 404 aa18.55■□□□□ 0.56
DDX54-204ENST00000546898 MAF1Q9H063 256 aa18.55■□□□□ 0.56
DDX54-204ENST00000546898 ASB14A6NK59 587 aa18.54■□□□□ 0.56
DDX54-204ENST00000546898 DNM1LO00429 736 aa18.54■□□□□ 0.56
DDX54-204ENST00000546898 SNAI1O95863 264 aaPredicted RBP18.54■□□□□ 0.56
DDX54-204ENST00000546898 RARBP10826 455 aa18.54■□□□□ 0.56
DDX54-204ENST00000546898 MCM5P33992 734 aa18.54■□□□□ 0.56
DDX54-204ENST00000546898 CNTN2Q02246 1040 aa18.54■□□□□ 0.56
DDX54-204ENST00000546898 TMEM67Q5HYA8 995 aa18.54■□□□□ 0.56
DDX54-204ENST00000546898 NSMFQ6X4W1 530 aa18.54■□□□□ 0.56
DDX54-204ENST00000546898 ARMCX2Q7L311 632 aa18.54■□□□□ 0.56
DDX54-204ENST00000546898 ADGRF4Q8IZF3 695 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms