RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 LMNB2Q03252 620 aa14.06□□□□□ -0.16
PTCH1-212ENST00000546744 PDCD2Q16342 344 aaPredicted RBP14.06□□□□□ -0.16
PTCH1-212ENST00000546744 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.06□□□□□ -0.16
PTCH1-212ENST00000546744 LRRC8CQ8TDW0 803 aa14.06□□□□□ -0.16
PTCH1-212ENST00000546744 DHTKD1Q96HY7 919 aaPredicted RBP14.06□□□□□ -0.16
PTCH1-212ENST00000546744 METTL14Q9HCE5 456 aaKnown RBP14.06□□□□□ -0.16
PTCH1-212ENST00000546744 ZMYM6O95789 1325 aa14.06□□□□□ -0.16
PTCH1-212ENST00000546744 PDE6CP51160 858 aa14.06□□□□□ -0.16
PTCH1-212ENST00000546744 ESRRGP62508 458 aa14.06□□□□□ -0.16
PTCH1-212ENST00000546744 ST13P4Q8IZP2 240 aaPredicted RBP14.06□□□□□ -0.16
PTCH1-212ENST00000546744 TRIM31Q9BZY9 425 aa14.06□□□□□ -0.16
PTCH1-212ENST00000546744 DRC3Q9H069 523 aa14.06□□□□□ -0.16
PTCH1-212ENST00000546744 ZBTB3Q9H5J0 574 aa14.06□□□□□ -0.16
PTCH1-212ENST00000546744 STOML1Q9UBI4 398 aa14.06□□□□□ -0.16
PTCH1-212ENST00000546744 MED14O60244 1454 aa14.06□□□□□ -0.16
PTCH1-212ENST00000546744 PNMA6EA0A0J9YXQ4 647 aa14.06□□□□□ -0.16
PTCH1-212ENST00000546744 C11orf57Q6ZUT1 292 aaPredicted RBP14.06□□□□□ -0.16
PTCH1-212ENST00000546744 ZBED6P86452 979 aa14.05□□□□□ -0.16
PTCH1-212ENST00000546744 DPCR1Q3MIW9 517 aa14.05□□□□□ -0.16
PTCH1-212ENST00000546744 DCAF17Q5H9S7 520 aaPredicted RBP14.05□□□□□ -0.16
PTCH1-212ENST00000546744 BEND3Q5T5X7 828 aa14.05□□□□□ -0.16
PTCH1-212ENST00000546744 APBB1IPQ7Z5R6 666 aaPredicted RBP14.05□□□□□ -0.16
PTCH1-212ENST00000546744 TEX11Q8IYF3 940 aa14.05□□□□□ -0.16
PTCH1-212ENST00000546744 CFAP61Q8NHU2 1237 aa14.05□□□□□ -0.16
PTCH1-212ENST00000546744 ITIH3Q06033 890 aa14.05□□□□□ -0.16
PTCH1-212ENST00000546744 HVCN1Q96D96 273 aa14.05□□□□□ -0.16
PTCH1-212ENST00000546744 PGRMC1O00264 195 aaKnown RBP14.05□□□□□ -0.16
PTCH1-212ENST00000546744 CASP14P31944 242 aa14.05□□□□□ -0.16
PTCH1-212ENST00000546744 NONOQ15233 471 aaKnown RBP eCLIP14.05□□□□□ -0.16
PTCH1-212ENST00000546744 NME8Q8N427 588 aa14.05□□□□□ -0.16
PTCH1-212ENST00000546744 RIC8AQ9NPQ8 531 aa14.05□□□□□ -0.16
PTCH1-212ENST00000546744 ADGRL3Q9HAR2 1447 aa14.04□□□□□ -0.16
PTCH1-212ENST00000546744 KDM3AQ9Y4C1 1321 aa14.04□□□□□ -0.16
PTCH1-212ENST00000546744 TADA3O75528 432 aa14.04□□□□□ -0.16
PTCH1-212ENST00000546744 RNF8O76064 485 aa14.04□□□□□ -0.16
PTCH1-212ENST00000546744 LONP1P36776 959 aaKnown RBP14.04□□□□□ -0.16
PTCH1-212ENST00000546744 ADCY2Q08462 1091 aa14.04□□□□□ -0.16
PTCH1-212ENST00000546744 STRN3Q13033 797 aa14.04□□□□□ -0.16
PTCH1-212ENST00000546744 RBM26Q5T8P6 1007 aaKnown RBP14.04□□□□□ -0.16
PTCH1-212ENST00000546744 LINC00301Q8NCQ3 95 aa14.04□□□□□ -0.16
PTCH1-212ENST00000546744 MIS12Q9H081 205 aa14.04□□□□□ -0.16
PTCH1-212ENST00000546744 CPS1P31327 1500 aa14.04□□□□□ -0.16
PTCH1-212ENST00000546744 CNGA1P29973 690 aa14.04□□□□□ -0.16
PTCH1-212ENST00000546744 C6orf118Q5T5N4 469 aa14.04□□□□□ -0.16
PTCH1-212ENST00000546744 CALR3Q96L12 384 aaKnown RBP14.04□□□□□ -0.16
PTCH1-212ENST00000546744 MOV10L1Q9BXT6 1211 aaKnown RBP14.04□□□□□ -0.16
PTCH1-212ENST00000546744 FOXP1Q9H334 677 aaPredicted RBP14.04□□□□□ -0.16
PTCH1-212ENST00000546744 VAT1LQ9HCJ6 419 aa14.04□□□□□ -0.16
PTCH1-212ENST00000546744 SAMM50Q9Y512 469 aa14.04□□□□□ -0.16
PTCH1-212ENST00000546744 PABPN1LA6NDY0 278 aaKnown RBP14.04□□□□□ -0.16
PTCH1-212ENST00000546744 SPDYE3A6NKU9 549 aa14.04□□□□□ -0.16
PTCH1-212ENST00000546744 GPAA1O43292 621 aa14.04□□□□□ -0.16
PTCH1-212ENST00000546744 MAP3K7O43318 606 aa14.04□□□□□ -0.16
PTCH1-212ENST00000546744 CYP2E1P05181 493 aaPredicted RBP14.04□□□□□ -0.16
PTCH1-212ENST00000546744 PCP11498 1178 aaKnown RBP14.04□□□□□ -0.16
PTCH1-212ENST00000546744 KCNG1Q9UIX4 513 aa14.04□□□□□ -0.16
PTCH1-212ENST00000546744 CDC42BPGQ6DT37 1551 aa14.04□□□□□ -0.16
PTCH1-212ENST00000546744 ARHGEF10O15013 1369 aa14.04□□□□□ -0.16
PTCH1-212ENST00000546744 LAD1O00515 517 aa14.04□□□□□ -0.16
PTCH1-212ENST00000546744 SATB1Q01826 763 aa14.04□□□□□ -0.16
PTCH1-212ENST00000546744 CCDC13Q8IYE1 715 aa14.04□□□□□ -0.16
PTCH1-212ENST00000546744 IP6K1Q92551 441 aa14.04□□□□□ -0.16
PTCH1-212ENST00000546744 SSX2IPQ9Y2D8 614 aa14.04□□□□□ -0.16
PTCH1-212ENST00000546744 COMMD10Q9Y6G5 202 aa14.04□□□□□ -0.16
PTCH1-212ENST00000546744 DIP2AQ14689 1571 aa14.03□□□□□ -0.16
PTCH1-212ENST00000546744 B4E1Z4 1266 aa14.03□□□□□ -0.16
PTCH1-212ENST00000546744 CAPRIN2Q6IMN6 1127 aaKnown RBP14.03□□□□□ -0.16
PTCH1-212ENST00000546744 ANKRD42Q8N9B4 389 aa14.03□□□□□ -0.16
PTCH1-212ENST00000546744 NEK9Q8TD19 979 aa14.03□□□□□ -0.16
PTCH1-212ENST00000546744 PPP4R1Q8TF05 950 aa14.03□□□□□ -0.16
PTCH1-212ENST00000546744 OLFM3Q96PB7 478 aa14.03□□□□□ -0.16
PTCH1-212ENST00000546744 N4BP1O75113 896 aaKnown RBP14.03□□□□□ -0.16
PTCH1-212ENST00000546744 DCTN3O75935 186 aa14.03□□□□□ -0.16
PTCH1-212ENST00000546744 NDUFA10O95299 355 aa14.03□□□□□ -0.16
PTCH1-212ENST00000546744 NT5C2P49902 561 aa14.03□□□□□ -0.16
PTCH1-212ENST00000546744 PLEKHF1Q96S99 279 aa14.03□□□□□ -0.16
PTCH1-212ENST00000546744 SNX16P57768 344 aa14.03□□□□□ -0.16
PTCH1-212ENST00000546744 ARHGAP4P98171 946 aa14.03□□□□□ -0.16
PTCH1-212ENST00000546744 CNPY4Q8N129 248 aa14.03□□□□□ -0.16
PTCH1-212ENST00000546744 CABLES1Q8TDN4 633 aa14.03□□□□□ -0.16
PTCH1-212ENST00000546744 DDX17Q92841 729 aaKnown RBP14.03□□□□□ -0.16
PTCH1-212ENST00000546744 METTL22Q9BUU2 404 aaPredicted RBP14.03□□□□□ -0.16
PTCH1-212ENST00000546744 CCDC68Q9H2F9 335 aa14.03□□□□□ -0.16
PTCH1-212ENST00000546744 FAM207AQ9NSI2 230 aaPredicted RBP14.03□□□□□ -0.16
PTCH1-212ENST00000546744 LRWD1Q9UFC0 647 aa14.03□□□□□ -0.16
PTCH1-212ENST00000546744 DIS3Q9Y2L1 958 aaKnown RBP14.03□□□□□ -0.16
PTCH1-212ENST00000546744 ADCY9O60503 1353 aa14.03□□□□□ -0.16
PTCH1-212ENST00000546744 ELF1P32519 619 aa14.02□□□□□ -0.16
PTCH1-212ENST00000546744 CHRNA2Q15822 529 aa14.02□□□□□ -0.16
PTCH1-212ENST00000546744 LONRF3Q496Y0 759 aa14.02□□□□□ -0.16
PTCH1-212ENST00000546744 G2E3Q7L622 706 aa14.02□□□□□ -0.16
PTCH1-212ENST00000546744 PSMB7Q99436 277 aa14.02□□□□□ -0.16
PTCH1-212ENST00000546744 PSMD1Q99460 953 aa14.02□□□□□ -0.16
PTCH1-212ENST00000546744 EPB41L5Q9HCM4 733 aa14.02□□□□□ -0.16
PTCH1-212ENST00000546744 EXOC7Q9UPT5 735 aa14.02□□□□□ -0.16
PTCH1-212ENST00000546744 DAAM1Q9Y4D1 1078 aa14.02□□□□□ -0.16
PTCH1-212ENST00000546744 MEFVO15553 781 aaPredicted RBP14.02□□□□□ -0.16
PTCH1-212ENST00000546744 ANXA1P04083 346 aa14.02□□□□□ -0.16
PTCH1-212ENST00000546744 RNASE9P60153 205 aaKnown RBP14.02□□□□□ -0.16
PTCH1-212ENST00000546744 WDR44Q5JSH3 913 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms