RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 ARSDP51689 593 aa8.5□□□□□ -1.05
CCDC60-205ENST00000546345 MOGSQ13724 837 aa8.5□□□□□ -1.05
CCDC60-205ENST00000546345 KIF22Q14807 665 aa8.5□□□□□ -1.05
CCDC60-205ENST00000546345 ETFBKMTQ8IXQ9 262 aa8.5□□□□□ -1.05
CCDC60-205ENST00000546345 PRR12Q9ULL5 1215 aa8.5□□□□□ -1.05
CCDC60-205ENST00000546345 DNMT3AQ9Y6K1 912 aaPredicted RBP8.5□□□□□ -1.05
CCDC60-205ENST00000546345 BDP1A6H8Y1 2624 aa8.49□□□□□ -1.05
CCDC60-205ENST00000546345 F8W031 263 aaPredicted RBP8.49□□□□□ -1.05
CCDC60-205ENST00000546345 OPLAHO14841 1288 aa8.49□□□□□ -1.05
CCDC60-205ENST00000546345 PDE8AO60658 829 aa8.49□□□□□ -1.05
CCDC60-205ENST00000546345 PCCAP05165 728 aaPredicted RBP8.49□□□□□ -1.05
CCDC60-205ENST00000546345 SLURP2P0DP57 97 aa8.49□□□□□ -1.05
CCDC60-205ENST00000546345 BCRP11274 1271 aa8.49□□□□□ -1.05
CCDC60-205ENST00000546345 CTSWP56202 376 aa8.49□□□□□ -1.05
CCDC60-205ENST00000546345 UBXN2AP68543 259 aa8.49□□□□□ -1.05
CCDC60-205ENST00000546345 INSM1Q01101 510 aaPredicted RBP8.49□□□□□ -1.05
CCDC60-205ENST00000546345 FAM109BQ6ICB4 259 aaPredicted RBP8.49□□□□□ -1.05
CCDC60-205ENST00000546345 FAM161BQ96MY7 647 aa8.49□□□□□ -1.05
CCDC60-205ENST00000546345 DEFB118Q96PH6 123 aa8.49□□□□□ -1.05
CCDC60-205ENST00000546345 TMEM39BQ9GZU3 492 aa8.49□□□□□ -1.05
CCDC60-205ENST00000546345 GREM2Q9H772 168 aa8.49□□□□□ -1.05
CCDC60-205ENST00000546345 PFASO15067 1338 aa8.49□□□□□ -1.05
CCDC60-205ENST00000546345 FAM205AQ6ZU69 1335 aa8.49□□□□□ -1.05
CCDC60-205ENST00000546345 PIEZO1Q92508 2521 aa8.48□□□□□ -1.05
CCDC60-205ENST00000546345 CACNA1FO60840 1977 aa8.48□□□□□ -1.05
CCDC60-205ENST00000546345 REV3LO60673 3130 aa8.48□□□□□ -1.05
CCDC60-205ENST00000546345 CETPP11597 493 aa8.48□□□□□ -1.05
CCDC60-205ENST00000546345 FAM26DQ5JW98 314 aa8.48□□□□□ -1.05
CCDC60-205ENST00000546345 MAFAQ8NHW3 353 aaPredicted RBP8.48□□□□□ -1.05
CCDC60-205ENST00000546345 CD209Q9NNX6 404 aa8.48□□□□□ -1.05
CCDC60-205ENST00000546345 BSDC1Q9NW68 430 aaPredicted RBP8.48□□□□□ -1.05
CCDC60-205ENST00000546345 FAM13BQ9NYF5 915 aa8.48□□□□□ -1.05
CCDC60-205ENST00000546345 SNAP23O00161 211 aa8.47□□□□□ -1.05
CCDC60-205ENST00000546345 ZBTB39O15060 712 aa8.47□□□□□ -1.05
CCDC60-205ENST00000546345 ZAP70P43403 619 aa8.47□□□□□ -1.05
CCDC60-205ENST00000546345 SPEM2Q0P670 501 aa8.47□□□□□ -1.05
CCDC60-205ENST00000546345 PPIL2Q13356 520 aa8.47□□□□□ -1.05
CCDC60-205ENST00000546345 MTMR3Q13615 1198 aa8.47□□□□□ -1.05
CCDC60-205ENST00000546345 TTLL11Q8NHH1 800 aa8.47□□□□□ -1.05
CCDC60-205ENST00000546345 UBE2OQ9C0C9 1292 aaKnown RBP8.47□□□□□ -1.05
CCDC60-205ENST00000546345 ANO2Q9NQ90 1003 aa8.47□□□□□ -1.05
CCDC60-205ENST00000546345 ZNF70Q9UC06 446 aaPredicted RBP8.47□□□□□ -1.05
CCDC60-205ENST00000546345 EGFL7Q9UHF1 273 aa8.47□□□□□ -1.05
CCDC60-205ENST00000546345 JAG2Q9Y219 1238 aa8.47□□□□□ -1.05
CCDC60-205ENST00000546345 CSADQ9Y600 493 aa8.47□□□□□ -1.05
CCDC60-205ENST00000546345 PDHXO00330 501 aa8.46□□□□□ -1.06
CCDC60-205ENST00000546345 MYO1BO43795 1136 aa8.46□□□□□ -1.06
CCDC60-205ENST00000546345 ADCY3O60266 1144 aa8.46□□□□□ -1.06
CCDC60-205ENST00000546345 FAM13AO94988 1023 aa8.46□□□□□ -1.06
CCDC60-205ENST00000546345 SERPINB4P48594 390 aa8.46□□□□□ -1.06
CCDC60-205ENST00000546345 FLT3LGP49771 235 aa8.46□□□□□ -1.06
CCDC60-205ENST00000546345 SNAPC2Q13487 334 aa8.46□□□□□ -1.06
CCDC60-205ENST00000546345 GRIN2CQ14957 1233 aa8.46□□□□□ -1.06
CCDC60-205ENST00000546345 ALKBH2Q6NS38 261 aa8.46□□□□□ -1.06
CCDC60-205ENST00000546345 NECAB2Q7Z6G3 386 aa8.46□□□□□ -1.06
CCDC60-205ENST00000546345 ANKRD23Q86SG2 305 aa8.46□□□□□ -1.06
CCDC60-205ENST00000546345 ERO1BQ86YB8 467 aa8.46□□□□□ -1.06
CCDC60-205ENST00000546345 RGL4Q8IZJ4 473 aa8.46□□□□□ -1.06
CCDC60-205ENST00000546345 CMTR1Q8N1G2 835 aaKnown RBP8.46□□□□□ -1.06
CCDC60-205ENST00000546345 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.46□□□□□ -1.06
CCDC60-205ENST00000546345 USP38Q8NB14 1042 aa8.46□□□□□ -1.06
CCDC60-205ENST00000546345 ZKSCAN4Q969J2 545 aaPredicted RBP8.46□□□□□ -1.06
CCDC60-205ENST00000546345 CDC5LQ99459 802 aaKnown RBP8.46□□□□□ -1.06
CCDC60-205ENST00000546345 CDX2Q99626 313 aaPredicted RBP8.46□□□□□ -1.06
CCDC60-205ENST00000546345 SLC30A3Q99726 388 aa8.46□□□□□ -1.06
CCDC60-205ENST00000546345 MYD88Q99836 296 aa8.46□□□□□ -1.06
CCDC60-205ENST00000546345 OXCT2Q9BYC2 517 aaPredicted RBP8.46□□□□□ -1.06
CCDC60-205ENST00000546345 TDRD3Q9H7E2 651 aaKnown RBP8.46□□□□□ -1.06
CCDC60-205ENST00000546345 C11orf16Q9NQ32 467 aa8.46□□□□□ -1.06
CCDC60-205ENST00000546345 BABAM1Q9NWV8 329 aa8.46□□□□□ -1.06
CCDC60-205ENST00000546345 BIN2Q9UBW5 565 aaPredicted RBP8.46□□□□□ -1.06
CCDC60-205ENST00000546345 LEMD3Q9Y2U8 911 aa8.46□□□□□ -1.06
CCDC60-205ENST00000546345 MUC6Q6W4X9 2439 aa8.46□□□□□ -1.06
CCDC60-205ENST00000546345 PLXNA1Q9UIW2 1896 aa8.46□□□□□ -1.06
CCDC60-205ENST00000546345 RPAP1Q9BWH6 1393 aaPredicted RBP8.46□□□□□ -1.06
CCDC60-205ENST00000546345 TFRCP02786 760 aaKnown RBP8.45□□□□□ -1.06
CCDC60-205ENST00000546345 ARAFP10398 606 aa8.45□□□□□ -1.06
CCDC60-205ENST00000546345 NPR3P17342 541 aa8.45□□□□□ -1.06
CCDC60-205ENST00000546345 MPSTP25325 297 aa8.45□□□□□ -1.06
CCDC60-205ENST00000546345 HOXD10P28358 340 aa8.45□□□□□ -1.06
CCDC60-205ENST00000546345 FKBP1AP62942 108 aaKnown RBP8.45□□□□□ -1.06
CCDC60-205ENST00000546345 ZNF211Q13398 564 aaPredicted RBP8.45□□□□□ -1.06
CCDC60-205ENST00000546345 ZSCAN1Q8NBB4 408 aa8.45□□□□□ -1.06
CCDC60-205ENST00000546345 CCDC191Q8NCU4 936 aa8.45□□□□□ -1.06
CCDC60-205ENST00000546345 PIK3R5Q8WYR1 880 aa8.45□□□□□ -1.06
CCDC60-205ENST00000546345 ACDQ96AP0 544 aa8.45□□□□□ -1.06
CCDC60-205ENST00000546345 WRNIP1Q96S55 665 aa8.45□□□□□ -1.06
CCDC60-205ENST00000546345 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.45□□□□□ -1.06
CCDC60-205ENST00000546345 PHAXQ9H814 394 aaKnown RBP8.45□□□□□ -1.06
CCDC60-205ENST00000546345 AVENQ9NQS1 362 aaPredicted RBP8.45□□□□□ -1.06
CCDC60-205ENST00000546345 DBF4Q9UBU7 674 aaPredicted RBP8.45□□□□□ -1.06
CCDC60-205ENST00000546345 GDF2Q9UK05 429 aaPredicted RBP8.45□□□□□ -1.06
CCDC60-205ENST00000546345 USP20Q9Y2K6 914 aa8.45□□□□□ -1.06
CCDC60-205ENST00000546345 MYH2Q9UKX2 1941 aa8.44□□□□□ -1.06
CCDC60-205ENST00000546345 TCP10L2B9ZVM9 353 aa8.44□□□□□ -1.06
CCDC60-205ENST00000546345 ICMTO60725 284 aa8.44□□□□□ -1.06
CCDC60-205ENST00000546345 HOXB7P09629 217 aa8.44□□□□□ -1.06
CCDC60-205ENST00000546345 CYP2C8P10632 490 aa8.44□□□□□ -1.06
CCDC60-205ENST00000546345 IL1R1P14778 569 aa8.44□□□□□ -1.06
CCDC60-205ENST00000546345 GRNP28799 593 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms