RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 CCDC174Q6PII3 467 aa23.84■■□□□ 1.41
HMGA2-211ENST00000545998 NBPF11Q86T75 865 aa23.84■■□□□ 1.41
HMGA2-211ENST00000545998 CCAR1Q8IX12 1150 aaKnown RBP23.84■■□□□ 1.41
HMGA2-211ENST00000545998 CCDC144CPQ8IYA2 1237 aa23.84■■□□□ 1.41
HMGA2-211ENST00000545998 FANCBQ8NB91 859 aa23.84■■□□□ 1.41
HMGA2-211ENST00000545998 COA7Q96BR5 231 aa23.84■■□□□ 1.41
HMGA2-211ENST00000545998 ALDH8A1Q9H2A2 487 aaPredicted RBP23.84■■□□□ 1.41
HMGA2-211ENST00000545998 MROH8Q9H579 483 aa23.84■■□□□ 1.41
HMGA2-211ENST00000545998 JMJD4Q9H9V9 463 aa23.84■■□□□ 1.41
HMGA2-211ENST00000545998 RCAN1P53805 252 aa23.83■■□□□ 1.41
HMGA2-211ENST00000545998 PLEKHH3Q7Z736 793 aa23.83■■□□□ 1.41
HMGA2-211ENST00000545998 AGBL1Q96MI9 1066 aa23.83■■□□□ 1.41
HMGA2-211ENST00000545998 SRRDQ9UH36 339 aa23.83■■□□□ 1.41
HMGA2-211ENST00000545998 RIPK3Q9Y572 518 aa23.83■■□□□ 1.41
HMGA2-211ENST00000545998 ZNFX1Q9P2E3 1918 aaKnown RBP23.83■■□□□ 1.4
HMGA2-211ENST00000545998 CYTH3O43739 400 aa23.82■■□□□ 1.4
HMGA2-211ENST00000545998 ICAM1P05362 532 aa23.82■■□□□ 1.4
HMGA2-211ENST00000545998 HOXD10P28358 340 aa23.82■■□□□ 1.4
HMGA2-211ENST00000545998 COPB2P35606 906 aa23.82■■□□□ 1.4
HMGA2-211ENST00000545998 NCAPG2Q86XI2 1143 aa23.82■■□□□ 1.4
HMGA2-211ENST00000545998 MTMR8Q96EF0 704 aa23.82■■□□□ 1.4
HMGA2-211ENST00000545998 RIOX1Q9H6W3 641 aa23.82■■□□□ 1.4
HMGA2-211ENST00000545998 GNAQP50148 359 aa23.82■■□□□ 1.4
HMGA2-211ENST00000545998 COL13A1Q5TAT6 717 aaPredicted RBP23.82■■□□□ 1.4
HMGA2-211ENST00000545998 WDR78Q5VTH9 848 aa23.82■■□□□ 1.4
HMGA2-211ENST00000545998 TBC1D32Q96NH3 1257 aa23.82■■□□□ 1.4
HMGA2-211ENST00000545998 LZTS2Q9BRK4 669 aa23.82■■□□□ 1.4
HMGA2-211ENST00000545998 VAT1LQ9HCJ6 419 aa23.82■■□□□ 1.4
HMGA2-211ENST00000545998 GJD2Q9UKL4 321 aa23.82■■□□□ 1.4
HMGA2-211ENST00000545998 HPS5Q9UPZ3 1129 aa23.82■■□□□ 1.4
HMGA2-211ENST00000545998 NID2Q14112 1375 aa23.81■■□□□ 1.4
HMGA2-211ENST00000545998 GOLGA8BA8MQT2 603 aa23.81■■□□□ 1.4
HMGA2-211ENST00000545998 PLEKHA8P1O95397 391 aa23.81■■□□□ 1.4
HMGA2-211ENST00000545998 SMARCA1P28370 1054 aa23.81■■□□□ 1.4
HMGA2-211ENST00000545998 PRMT2P55345 433 aa23.81■■□□□ 1.4
HMGA2-211ENST00000545998 PRKCZQ05513 592 aa23.81■■□□□ 1.4
HMGA2-211ENST00000545998 PKN2Q16513 984 aaKnown RBP23.81■■□□□ 1.4
HMGA2-211ENST00000545998 CDC37Q16543 378 aaPredicted RBP23.81■■□□□ 1.4
HMGA2-211ENST00000545998 CWC22Q9HCG8 908 aaKnown RBP23.81■■□□□ 1.4
HMGA2-211ENST00000545998 RBM28Q9NW13 759 aaKnown RBP23.81■■□□□ 1.4
HMGA2-211ENST00000545998 NAP1L2Q9ULW6 460 aaPredicted RBP23.81■■□□□ 1.4
HMGA2-211ENST00000545998 GABRQQ9UN88 632 aa23.81■■□□□ 1.4
HMGA2-211ENST00000545998 PTPN22Q9Y2R2 807 aa23.81■■□□□ 1.4
HMGA2-211ENST00000545998 ZNF236Q9UL36 1845 aa23.8■■□□□ 1.4
HMGA2-211ENST00000545998 DHX16O60231 1041 aaKnown RBP23.8■■□□□ 1.4
HMGA2-211ENST00000545998 PTPREP23469 700 aa23.8■■□□□ 1.4
HMGA2-211ENST00000545998 SLC4A3P48751 1232 aa23.8■■□□□ 1.4
HMGA2-211ENST00000545998 NEK4P51957 841 aa23.8■■□□□ 1.4
HMGA2-211ENST00000545998 RTN1Q16799 776 aa23.8■■□□□ 1.4
HMGA2-211ENST00000545998 MORN1Q5T089 497 aa23.8■■□□□ 1.4
HMGA2-211ENST00000545998 TMTC3Q6ZXV5 915 aa23.8■■□□□ 1.4
HMGA2-211ENST00000545998 SRBD1Q8N5C6 995 aaKnown RBP23.8■■□□□ 1.4
HMGA2-211ENST00000545998 SPZ1Q9BXG8 430 aa23.8■■□□□ 1.4
HMGA2-211ENST00000545998 FAM217BQ9NTX9 383 aaPredicted RBP23.8■■□□□ 1.4
HMGA2-211ENST00000545998 CCPG1Q9ULG6 757 aa23.8■■□□□ 1.4
HMGA2-211ENST00000545998 GOLGA8AA7E2F4 631 aa23.79■■□□□ 1.4
HMGA2-211ENST00000545998 METAP2P50579 478 aaKnown RBP eCLIP23.79■■□□□ 1.4
HMGA2-211ENST00000545998 GRB14Q14449 540 aa23.79■■□□□ 1.4
HMGA2-211ENST00000545998 QRICH1Q2TAL8 776 aa23.79■■□□□ 1.4
HMGA2-211ENST00000545998 TKFCQ3LXA3 575 aa23.79■■□□□ 1.4
HMGA2-211ENST00000545998 IVNS1ABPQ9Y6Y0 642 aa23.79■■□□□ 1.4
HMGA2-211ENST00000545998 SLC15A5A6NIM6 579 aa23.78■■□□□ 1.4
HMGA2-211ENST00000545998 STRNO43815 780 aa23.78■■□□□ 1.4
HMGA2-211ENST00000545998 TAL1P17542 331 aaPredicted RBP23.78■■□□□ 1.4
HMGA2-211ENST00000545998 PDIA3P30101 505 aaKnown RBP23.78■■□□□ 1.4
HMGA2-211ENST00000545998 CDC27P30260 824 aa23.78■■□□□ 1.4
HMGA2-211ENST00000545998 FLT3LGP49771 235 aa23.78■■□□□ 1.4
HMGA2-211ENST00000545998 CHST13Q8NET6 341 aa23.78■■□□□ 1.4
HMGA2-211ENST00000545998 SOCS4Q8WXH5 440 aa23.78■■□□□ 1.4
HMGA2-211ENST00000545998 USP6NLQ92738 828 aa23.78■■□□□ 1.4
HMGA2-211ENST00000545998 ZNF274Q96GC6 653 aaPredicted RBP23.78■■□□□ 1.4
HMGA2-211ENST00000545998 LARP6Q9BRS8 491 aaKnown RBP23.78■■□□□ 1.4
HMGA2-211ENST00000545998 BRCA2P51587 3418 aa23.78■■□□□ 1.4
HMGA2-211ENST00000545998 ZBTB5O15062 677 aa23.78■■□□□ 1.4
HMGA2-211ENST00000545998 AK2P54819 239 aa23.78■■□□□ 1.4
HMGA2-211ENST00000545998 PPP2R5BQ15173 497 aa23.78■■□□□ 1.4
HMGA2-211ENST00000545998 ANKRD1Q15327 319 aa23.78■■□□□ 1.4
HMGA2-211ENST00000545998 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.78■■□□□ 1.4
HMGA2-211ENST00000545998 ABRAQ8N0Z2 381 aa23.78■■□□□ 1.4
HMGA2-211ENST00000545998 CMTR1Q8N1G2 835 aaKnown RBP23.78■■□□□ 1.4
HMGA2-211ENST00000545998 NUDT12Q9BQG2 462 aa23.78■■□□□ 1.4
HMGA2-211ENST00000545998 HOMER2Q9NSB8 354 aa23.78■■□□□ 1.4
HMGA2-211ENST00000545998 PNMA2Q9UL42 364 aa23.78■■□□□ 1.4
HMGA2-211ENST00000545998 FCER1AP12319 257 aa23.77■■□□□ 1.4
HMGA2-211ENST00000545998 ALAS1P13196 640 aa23.77■■□□□ 1.4
HMGA2-211ENST00000545998 FBXO46Q6PJ61 603 aaPredicted RBP23.77■■□□□ 1.4
HMGA2-211ENST00000545998 TRERF1Q96PN7 1200 aa23.77■■□□□ 1.4
HMGA2-211ENST00000545998 PIGSQ96S52 555 aa23.77■■□□□ 1.4
HMGA2-211ENST00000545998 RNF146Q9NTX7 359 aa23.77■■□□□ 1.4
HMGA2-211ENST00000545998 FBXO40Q9UH90 709 aa23.77■■□□□ 1.4
HMGA2-211ENST00000545998 ADD1P35611 737 aaKnown RBP23.76■■□□□ 1.39
HMGA2-211ENST00000545998 FUT2Q10981 343 aa23.76■■□□□ 1.39
HMGA2-211ENST00000545998 IRF5Q13568 498 aa23.76■■□□□ 1.39
HMGA2-211ENST00000545998 HOMER1Q86YM7 354 aa23.76■■□□□ 1.39
HMGA2-211ENST00000545998 MMP19Q99542 508 aa23.76■■□□□ 1.39
HMGA2-211ENST00000545998 MCOLN1Q9GZU1 580 aa23.76■■□□□ 1.39
HMGA2-211ENST00000545998 ACAD9Q9H845 621 aa23.76■■□□□ 1.39
HMGA2-211ENST00000545998 PTCH2Q9Y6C5 1203 aa23.76■■□□□ 1.39
HMGA2-211ENST00000545998 CCDC196A0A1B0GTZ2 297 aa23.75■■□□□ 1.39
HMGA2-211ENST00000545998 PPP1R11O60927 126 aaPredicted RBP23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms