RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 AGBL1Q96MI9 1066 aa26.84■■□□□ 1.89
CHD4-214ENST00000545942 TCP11L1Q9NUJ3 509 aa26.84■■□□□ 1.89
CHD4-214ENST00000545942 MTMR7Q9Y216 660 aa26.84■■□□□ 1.89
CHD4-214ENST00000545942 ZNF536O15090 1300 aa26.83■■□□□ 1.89
CHD4-214ENST00000545942 SZT2Q5T011 3432 aa26.83■■□□□ 1.89
CHD4-214ENST00000545942 TKFCQ3LXA3 575 aa26.83■■□□□ 1.89
CHD4-214ENST00000545942 AKNAD1Q5T1N1 836 aa26.83■■□□□ 1.89
CHD4-214ENST00000545942 MFSD6Q6ZSS7 791 aa26.83■■□□□ 1.89
CHD4-214ENST00000545942 RASGRP2Q7LDG7 609 aa26.83■■□□□ 1.89
CHD4-214ENST00000545942 TDHQ8IZJ6 230 aa26.83■■□□□ 1.89
CHD4-214ENST00000545942 PRKAG2Q9UGJ0 569 aa26.83■■□□□ 1.89
CHD4-214ENST00000545942 FAM184BQ9ULE4 1060 aa26.83■■□□□ 1.89
CHD4-214ENST00000545942 ATP11BQ9Y2G3 1177 aa26.83■■□□□ 1.89
CHD4-214ENST00000545942 LAMA3Q16787 3333 aa26.83■■□□□ 1.88
CHD4-214ENST00000545942 SOX1O00570 391 aaPredicted RBP26.82■■□□□ 1.88
CHD4-214ENST00000545942 PGK1P00558 417 aa26.82■■□□□ 1.88
CHD4-214ENST00000545942 TOP1P11387 765 aaKnown RBP26.82■■□□□ 1.88
CHD4-214ENST00000545942 MDM2Q00987 491 aaPredicted RBP26.82■■□□□ 1.88
CHD4-214ENST00000545942 CCDC96Q2M329 555 aa26.82■■□□□ 1.88
CHD4-214ENST00000545942 FERMT2Q96AC1 680 aa26.82■■□□□ 1.88
CHD4-214ENST00000545942 DIAPH3Q9NSV4 1193 aa26.82■■□□□ 1.88
CHD4-214ENST00000545942 RNF146Q9NTX7 359 aa26.82■■□□□ 1.88
CHD4-214ENST00000545942 ZHX1Q9UKY1 873 aaPredicted RBP26.82■■□□□ 1.88
CHD4-214ENST00000545942 PRR12Q9ULL5 1215 aa26.82■■□□□ 1.88
CHD4-214ENST00000545942 PHF24Q9UPV7 400 aa26.82■■□□□ 1.88
CHD4-214ENST00000545942 HIP1O00291 1037 aa26.81■■□□□ 1.88
CHD4-214ENST00000545942 SNX17Q15036 470 aa26.81■■□□□ 1.88
CHD4-214ENST00000545942 CWC27Q6UX04 472 aaKnown RBP26.81■■□□□ 1.88
CHD4-214ENST00000545942 LENG1Q96BZ8 264 aaPredicted RBP26.81■■□□□ 1.88
CHD4-214ENST00000545942 FGD4Q96M96 766 aa26.81■■□□□ 1.88
CHD4-214ENST00000545942 LBHD1Q9BQE6 289 aaPredicted RBP26.81■■□□□ 1.88
CHD4-214ENST00000545942 TMEM47Q9BQJ4 181 aa26.81■■□□□ 1.88
CHD4-214ENST00000545942 RNF41Q9H4P4 317 aaPredicted RBP26.81■■□□□ 1.88
CHD4-214ENST00000545942 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.81■■□□□ 1.88
CHD4-214ENST00000545942 DNAH12Q6ZR08 3092 aa26.8■■□□□ 1.88
CHD4-214ENST00000545942 ALAS1P13196 640 aa26.8■■□□□ 1.88
CHD4-214ENST00000545942 ACVR2BQ13705 512 aa26.8■■□□□ 1.88
CHD4-214ENST00000545942 C1orf53Q5VUE5 145 aa26.8■■□□□ 1.88
CHD4-214ENST00000545942 CCDC174Q6PII3 467 aa26.8■■□□□ 1.88
CHD4-214ENST00000545942 TBC1D10CQ8IV04 446 aa26.8■■□□□ 1.88
CHD4-214ENST00000545942 TRERF1Q96PN7 1200 aa26.8■■□□□ 1.88
CHD4-214ENST00000545942 ABHD16BQ9H3Z7 469 aa26.8■■□□□ 1.88
CHD4-214ENST00000545942 A1CFQ9NQ94 594 aaKnown RBP26.8■■□□□ 1.88
CHD4-214ENST00000545942 POTEB2H3BUK9 544 aa26.79■■□□□ 1.88
CHD4-214ENST00000545942 ADAMTS4O75173 837 aa26.79■■□□□ 1.88
CHD4-214ENST00000545942 SNAP25P60880 206 aa26.79■■□□□ 1.88
CHD4-214ENST00000545942 TRIM60Q495X7 471 aa26.79■■□□□ 1.88
CHD4-214ENST00000545942 ARMCX2Q7L311 632 aa26.79■■□□□ 1.88
CHD4-214ENST00000545942 LRCH3Q96II8 777 aa26.79■■□□□ 1.88
CHD4-214ENST00000545942 ZNF213O14771 459 aa26.78■■□□□ 1.88
CHD4-214ENST00000545942 CNTN2Q02246 1040 aa26.78■■□□□ 1.88
CHD4-214ENST00000545942 LRIT3Q3SXY7 679 aa26.78■■□□□ 1.88
CHD4-214ENST00000545942 BTNL9Q6UXG8 535 aa26.78■■□□□ 1.88
CHD4-214ENST00000545942 FAM133AQ8N9E0 248 aa26.78■■□□□ 1.88
CHD4-214ENST00000545942 TTC14Q96N46 770 aa26.78■■□□□ 1.88
CHD4-214ENST00000545942 CCDC144CPQ8IYA2 1237 aa26.77■■□□□ 1.88
CHD4-214ENST00000545942 ESR2Q92731 530 aa26.77■■□□□ 1.88
CHD4-214ENST00000545942 CCPG1Q9ULG6 757 aa26.77■■□□□ 1.88
CHD4-214ENST00000545942 SYNRGQ9UMZ2 1314 aa26.77■■□□□ 1.88
CHD4-214ENST00000545942 SMCHD1A6NHR9 2005 aa26.76■■□□□ 1.87
CHD4-214ENST00000545942 DUSP11O75319 330 aaKnown RBP26.76■■□□□ 1.87
CHD4-214ENST00000545942 ICAM1P05362 532 aa26.76■■□□□ 1.87
CHD4-214ENST00000545942 SLC16A2P36021 539 aa26.76■■□□□ 1.87
CHD4-214ENST00000545942 TTBK2Q6IQ55 1244 aa26.76■■□□□ 1.87
CHD4-214ENST00000545942 TSEN34Q9BSV6 310 aaKnown RBP26.76■■□□□ 1.87
CHD4-214ENST00000545942 RANBP17Q9H2T7 1088 aaKnown RBP26.76■■□□□ 1.87
CHD4-214ENST00000545942 A0A1W2PQ45 241 aaPredicted RBP26.75■■□□□ 1.87
CHD4-214ENST00000545942 A0A1W2PQY0 241 aa26.75■■□□□ 1.87
CHD4-214ENST00000545942 PDHBP11177 359 aa26.75■■□□□ 1.87
CHD4-214ENST00000545942 NT5C2P49902 561 aa26.75■■□□□ 1.87
CHD4-214ENST00000545942 CCDC144BQ3MJ40 725 aa26.75■■□□□ 1.87
CHD4-214ENST00000545942 MUM1L1Q5H9M0 696 aa26.75■■□□□ 1.87
CHD4-214ENST00000545942 SYDE2Q5VT97 1194 aa26.75■■□□□ 1.87
CHD4-214ENST00000545942 PRDM5Q9NQX1 630 aaPredicted RBP26.75■■□□□ 1.87
CHD4-214ENST00000545942 NEDD4P46934 1319 aa26.75■■□□□ 1.87
CHD4-214ENST00000545942 FRMPD2Q68DX3 1309 aaPredicted RBP26.75■■□□□ 1.87
CHD4-214ENST00000545942 ASB14A6NK59 587 aa26.74■■□□□ 1.87
CHD4-214ENST00000545942 KLHDC9Q8NEP7 349 aa26.74■■□□□ 1.87
CHD4-214ENST00000545942 DSCC1Q9BVC3 393 aa26.74■■□□□ 1.87
CHD4-214ENST00000545942 GPCPD1Q9NPB8 672 aa26.74■■□□□ 1.87
CHD4-214ENST00000545942 CYP39A1Q9NYL5 469 aa26.74■■□□□ 1.87
CHD4-214ENST00000545942 SOWAHBA6NEL2 793 aa26.73■■□□□ 1.87
CHD4-214ENST00000545942 MOXD2PA6NHM9 499 aa26.73■■□□□ 1.87
CHD4-214ENST00000545942 ACLYP53396 1101 aa26.73■■□□□ 1.87
CHD4-214ENST00000545942 GPR153Q6NV75 609 aa26.73■■□□□ 1.87
CHD4-214ENST00000545942 KATNBL1Q9H079 304 aa26.73■■□□□ 1.87
CHD4-214ENST00000545942 PDLIM7Q9NR12 457 aa26.73■■□□□ 1.87
CHD4-214ENST00000545942 ADCY6O43306 1168 aa26.72■■□□□ 1.87
CHD4-214ENST00000545942 TLE2Q04725 743 aa26.72■■□□□ 1.87
CHD4-214ENST00000545942 ZNF543Q08ER8 600 aa26.72■■□□□ 1.87
CHD4-214ENST00000545942 CCSAPQ6IQ19 270 aaPredicted RBP26.72■■□□□ 1.87
CHD4-214ENST00000545942 NSMFQ6X4W1 530 aa26.72■■□□□ 1.87
CHD4-214ENST00000545942 NUP133Q8WUM0 1156 aa26.72■■□□□ 1.87
CHD4-214ENST00000545942 SPC25Q9HBM1 224 aa26.72■■□□□ 1.87
CHD4-214ENST00000545942 C6orf222P0C671 652 aaPredicted RBP26.71■■□□□ 1.87
CHD4-214ENST00000545942 SNHG28P0DPA3 235 aa26.71■■□□□ 1.87
CHD4-214ENST00000545942 CST5P28325 142 aaPredicted RBP26.71■■□□□ 1.87
CHD4-214ENST00000545942 KCNA10Q16322 511 aa26.71■■□□□ 1.87
CHD4-214ENST00000545942 IQCA1Q86XH1 822 aa26.71■■□□□ 1.87
CHD4-214ENST00000545942 DGKHQ86XP1 1220 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms