RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 GNEQ9Y223 722 aaKnown RBP17.71■□□□□ 0.43
RTN3-214ENST00000545432 ASTN1O14525 1302 aa17.71■□□□□ 0.42
RTN3-214ENST00000545432 GRIN2DO15399 1336 aa17.71■□□□□ 0.42
RTN3-214ENST00000545432 OAZ1P54368 228 aa17.7■□□□□ 0.42
RTN3-214ENST00000545432 CCDC85BQ15834 202 aaPredicted RBP17.7■□□□□ 0.42
RTN3-214ENST00000545432 SBK1Q52WX2 424 aa17.7■□□□□ 0.42
RTN3-214ENST00000545432 ARMCX2Q7L311 632 aa17.7■□□□□ 0.42
RTN3-214ENST00000545432 CLASRPQ8N2M8 674 aaKnown RBP17.7■□□□□ 0.42
RTN3-214ENST00000545432 SYNPO2Q9UMS6 1093 aa17.7■□□□□ 0.42
RTN3-214ENST00000545432 GREB1LQ9C091 1923 aaPredicted RBP17.7■□□□□ 0.42
RTN3-214ENST00000545432 CHD7Q9P2D1 2997 aa17.7■□□□□ 0.42
RTN3-214ENST00000545432 IGKV6D-41A0A0C4DH26 115 aa17.69■□□□□ 0.42
RTN3-214ENST00000545432 NDUFB10O96000 172 aa17.69■□□□□ 0.42
RTN3-214ENST00000545432 ATP5JP18859 108 aa17.69■□□□□ 0.42
RTN3-214ENST00000545432 IGFBP4P22692 258 aa17.69■□□□□ 0.42
RTN3-214ENST00000545432 ITPRIPQ8IWB1 547 aa17.69■□□□□ 0.42
RTN3-214ENST00000545432 AMOTL1Q8IY63 956 aa17.69■□□□□ 0.42
RTN3-214ENST00000545432 FAM133AQ8N9E0 248 aa17.69■□□□□ 0.42
RTN3-214ENST00000545432 KIF1BPQ96EK5 621 aa17.69■□□□□ 0.42
RTN3-214ENST00000545432 DNAJC2Q99543 621 aaKnown RBP17.69■□□□□ 0.42
RTN3-214ENST00000545432 NUP88Q99567 741 aaPredicted RBP17.69■□□□□ 0.42
RTN3-214ENST00000545432 PAG1Q9NWQ8 432 aa17.69■□□□□ 0.42
RTN3-214ENST00000545432 PCDHA11Q9Y5I1 949 aa17.69■□□□□ 0.42
RTN3-214ENST00000545432 CCER2I3L3R5 266 aa17.68■□□□□ 0.42
RTN3-214ENST00000545432 ERC2O15083 957 aa17.68■□□□□ 0.42
RTN3-214ENST00000545432 ZBED4O75132 1171 aa17.68■□□□□ 0.42
RTN3-214ENST00000545432 RASA1P20936 1047 aa17.68■□□□□ 0.42
RTN3-214ENST00000545432 CCDC144CPQ8IYA2 1237 aa17.68■□□□□ 0.42
RTN3-214ENST00000545432 VTI1AQ96AJ9 217 aa17.68■□□□□ 0.42
RTN3-214ENST00000545432 NOC4LQ9BVI4 516 aaKnown RBP17.68■□□□□ 0.42
RTN3-214ENST00000545432 TSPYL2Q9H2G4 693 aaPredicted RBP17.68■□□□□ 0.42
RTN3-214ENST00000545432 HIPK3Q9H422 1215 aa17.68■□□□□ 0.42
RTN3-214ENST00000545432 Q9Y3F1 56 aa17.68■□□□□ 0.42
RTN3-214ENST00000545432 UMODL1Q5DID0 1318 aa17.68■□□□□ 0.42
RTN3-214ENST00000545432 CHGBP05060 677 aa17.67■□□□□ 0.42
RTN3-214ENST00000545432 ITGA7Q13683 1181 aa17.67■□□□□ 0.42
RTN3-214ENST00000545432 OTOP2Q7RTS6 562 aa17.67■□□□□ 0.42
RTN3-214ENST00000545432 FTSJ3Q8IY81 847 aaKnown RBP17.67■□□□□ 0.42
RTN3-214ENST00000545432 ANKRD35Q8N283 1001 aa17.67■□□□□ 0.42
RTN3-214ENST00000545432 AGBL1Q96MI9 1066 aa17.67■□□□□ 0.42
RTN3-214ENST00000545432 HAUS7Q99871 368 aa17.67■□□□□ 0.42
RTN3-214ENST00000545432 WNT8AQ9H1J5 351 aa17.67■□□□□ 0.42
RTN3-214ENST00000545432 RAVER2Q9HCJ3 691 aaKnown RBP17.67■□□□□ 0.42
RTN3-214ENST00000545432 ARPP21Q9UBL0 812 aaPredicted RBP17.67■□□□□ 0.42
RTN3-214ENST00000545432 FEM1BQ9UK73 627 aa17.67■□□□□ 0.42
RTN3-214ENST00000545432 MYH8P13535 1937 aa17.66■□□□□ 0.42
RTN3-214ENST00000545432 BAZ2AQ9UIF9 1905 aaKnown RBP17.66■□□□□ 0.42
RTN3-214ENST00000545432 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.66■□□□□ 0.42
RTN3-214ENST00000545432 FDX1P10109 184 aa17.66■□□□□ 0.42
RTN3-214ENST00000545432 BEX3Q00994 111 aa17.66■□□□□ 0.42
RTN3-214ENST00000545432 TNFAIP2Q03169 654 aa17.66■□□□□ 0.42
RTN3-214ENST00000545432 AAK1Q2M2I8 961 aa17.66■□□□□ 0.42
RTN3-214ENST00000545432 GIMAP6Q6P9H5 292 aa17.66■□□□□ 0.42
RTN3-214ENST00000545432 CXCL17Q6UXB2 119 aa17.66■□□□□ 0.42
RTN3-214ENST00000545432 RPAP2Q8IXW5 612 aaPredicted RBP17.66■□□□□ 0.42
RTN3-214ENST00000545432 RPUSD2Q8IZ73 545 aaKnown RBP17.66■□□□□ 0.42
RTN3-214ENST00000545432 CPXCR1Q8N123 301 aa17.66■□□□□ 0.42
RTN3-214ENST00000545432 DDRGK1Q96HY6 314 aa17.66■□□□□ 0.42
RTN3-214ENST00000545432 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.66■□□□□ 0.42
RTN3-214ENST00000545432 PUS7LQ9H0K6 701 aaKnown RBP17.66■□□□□ 0.42
RTN3-214ENST00000545432 SLC4A4Q9Y6R1 1079 aa17.66■□□□□ 0.42
RTN3-214ENST00000545432 IFIT2P09913 472 aaKnown RBP17.65■□□□□ 0.42
RTN3-214ENST00000545432 CNTN2Q02246 1040 aa17.65■□□□□ 0.42
RTN3-214ENST00000545432 GMCL1P1Q8NEA9 526 aa17.65■□□□□ 0.42
RTN3-214ENST00000545432 IL27Q8NEV9 243 aa17.65■□□□□ 0.42
RTN3-214ENST00000545432 NECAB3Q96P71 396 aaPredicted RBP17.65■□□□□ 0.42
RTN3-214ENST00000545432 STRBPQ96SI9 672 aaKnown RBP17.65■□□□□ 0.42
RTN3-214ENST00000545432 BOLA2Q9H3K6 86 aa17.65■□□□□ 0.42
RTN3-214ENST00000545432 MTCH2Q9Y6C9 303 aa17.65■□□□□ 0.42
RTN3-214ENST00000545432 PRRC2BQ5JSZ5 2229 aaKnown RBP17.65■□□□□ 0.42
RTN3-214ENST00000545432 SOWAHBA6NEL2 793 aa17.64■□□□□ 0.41
RTN3-214ENST00000545432 GSG1L2A8MUP6 293 aa17.64■□□□□ 0.41
RTN3-214ENST00000545432 RAB11FIP3O75154 756 aa17.64■□□□□ 0.41
RTN3-214ENST00000545432 PFKMP08237 780 aa17.64■□□□□ 0.41
RTN3-214ENST00000545432 RABGGTBP53611 331 aa17.64■□□□□ 0.41
RTN3-214ENST00000545432 IQSEC1Q6DN90 963 aa17.64■□□□□ 0.41
RTN3-214ENST00000545432 SIRT2Q8IXJ6 389 aa17.64■□□□□ 0.41
RTN3-214ENST00000545432 MORC4Q8TE76 937 aa17.64■□□□□ 0.41
RTN3-214ENST00000545432 CLIP2Q9UDT6 1046 aa17.64■□□□□ 0.41
RTN3-214ENST00000545432 SLC4A7Q9Y6M7 1214 aa17.64■□□□□ 0.41
RTN3-214ENST00000545432 XIRP2A4UGR9 3374 aa17.63■□□□□ 0.41
RTN3-214ENST00000545432 PIEZO1Q92508 2521 aa17.63■□□□□ 0.41
RTN3-214ENST00000545432 MCM3APO60318 1980 aa17.63■□□□□ 0.41
RTN3-214ENST00000545432 ASB14A6NK59 587 aa17.63■□□□□ 0.41
RTN3-214ENST00000545432 APBB1O00213 710 aa17.63■□□□□ 0.41
RTN3-214ENST00000545432 TLL1O43897 1013 aa17.63■□□□□ 0.41
RTN3-214ENST00000545432 B4GALT4O60513 344 aa17.63■□□□□ 0.41
RTN3-214ENST00000545432 MYOGP15173 224 aa17.63■□□□□ 0.41
RTN3-214ENST00000545432 CCL23P55773 120 aa17.63■□□□□ 0.41
RTN3-214ENST00000545432 TFF2Q03403 129 aa17.63■□□□□ 0.41
RTN3-214ENST00000545432 FSCN1Q16658 493 aaKnown RBP17.63■□□□□ 0.41
RTN3-214ENST00000545432 PPP2R2DQ66LE6 453 aa17.63■□□□□ 0.41
RTN3-214ENST00000545432 TAPT1Q6NXT6 567 aa17.63■□□□□ 0.41
RTN3-214ENST00000545432 TLK2Q86UE8 772 aa17.63■□□□□ 0.41
RTN3-214ENST00000545432 KIFC2Q96AC6 838 aa17.63■□□□□ 0.41
RTN3-214ENST00000545432 LRFN3Q9BTN0 628 aa17.63■□□□□ 0.41
RTN3-214ENST00000545432 TRPV6Q9H1D0 765 aa17.63■□□□□ 0.41
RTN3-214ENST00000545432 MTMR4Q9NYA4 1195 aa17.63■□□□□ 0.41
RTN3-214ENST00000545432 COG5Q9UP83 839 aa17.63■□□□□ 0.41
RTN3-214ENST00000545432 ZNF536O15090 1300 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms