RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.7□□□□□ -1.5
UBE4A-203ENST00000545354 CCDC13Q8IYE1 715 aa5.7□□□□□ -1.5
UBE4A-203ENST00000545354 NLGN1Q8N2Q7 840 aa5.7□□□□□ -1.5
UBE4A-203ENST00000545354 GIMAP8Q8ND71 665 aaPredicted RBP5.7□□□□□ -1.5
UBE4A-203ENST00000545354 SMARCC2Q8TAQ2 1214 aa5.7□□□□□ -1.5
UBE4A-203ENST00000545354 EPS8L3Q8TE67 593 aaKnown RBP5.7□□□□□ -1.5
UBE4A-203ENST00000545354 ZDHHC16Q969W1 377 aa5.7□□□□□ -1.5
UBE4A-203ENST00000545354 SKA1Q96BD8 255 aa5.7□□□□□ -1.5
UBE4A-203ENST00000545354 C1orf74Q96LT6 269 aa5.7□□□□□ -1.5
UBE4A-203ENST00000545354 SAMD11Q96NU1 681 aa5.7□□□□□ -1.5
UBE4A-203ENST00000545354 NR1H4Q96RI1 486 aaPredicted RBP5.7□□□□□ -1.5
UBE4A-203ENST00000545354 OXCT2Q9BYC2 517 aaPredicted RBP5.7□□□□□ -1.5
UBE4A-203ENST00000545354 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.7□□□□□ -1.5
UBE4A-203ENST00000545354 SH3GLB2Q9NR46 395 aa5.7□□□□□ -1.5
UBE4A-203ENST00000545354 MTRF1LQ9UGC7 380 aaKnown RBP5.7□□□□□ -1.5
UBE4A-203ENST00000545354 R3HDM2Q9Y2K5 976 aaKnown RBP5.7□□□□□ -1.5
UBE4A-203ENST00000545354 CD2APQ9Y5K6 639 aa5.7□□□□□ -1.5
UBE4A-203ENST00000545354 FHOD1Q9Y613 1164 aa5.7□□□□□ -1.5
UBE4A-203ENST00000545354 TACC3Q9Y6A5 838 aa5.7□□□□□ -1.5
UBE4A-203ENST00000545354 ABCA10Q8WWZ4 1543 aa5.7□□□□□ -1.5
UBE4A-203ENST00000545354 MYPNQ86TC9 1320 aa5.7□□□□□ -1.5
UBE4A-203ENST00000545354 ADAMTS12P58397 1594 aa5.7□□□□□ -1.5
UBE4A-203ENST00000545354 EBAG9O00559 213 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 ZBTB39O15060 712 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 TEX28O15482 410 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 YKT6O15498 198 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 DNAJC6O75061 913 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 ZC3H11AO75152 810 aaKnown RBP eCLIP5.69□□□□□ -1.5
UBE4A-203ENST00000545354 SMIM24O75264 130 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 DAB1O75553 588 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 ZFYP08048 801 aaPredicted RBP5.69□□□□□ -1.5
UBE4A-203ENST00000545354 PDGFRBP09619 1106 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 KRT10P13645 584 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 HPDP32754 393 aaPredicted RBP5.69□□□□□ -1.5
UBE4A-203ENST00000545354 HOXD12P35452 270 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 SKIV2L2P42285 1042 aaKnown RBP5.69□□□□□ -1.5
UBE4A-203ENST00000545354 CENPAP49450 140 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 MARSP56192 900 aaKnown RBP5.69□□□□□ -1.5
UBE4A-203ENST00000545354 MRPS35P82673 323 aaKnown RBP5.69□□□□□ -1.5
UBE4A-203ENST00000545354 DRP2Q13474 957 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 LBRQ14739 615 aaKnown RBP5.69□□□□□ -1.5
UBE4A-203ENST00000545354 SPCS2Q15005 226 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 PPP1R7Q15435 360 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 IMMTQ16891 758 aaKnown RBP5.69□□□□□ -1.5
UBE4A-203ENST00000545354 WASHC4Q2M389 1173 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 C15orf59Q2T9L4 293 aaPredicted RBP5.69□□□□□ -1.5
UBE4A-203ENST00000545354 WDR45BQ5MNZ6 344 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 TWF2Q6IBS0 349 aaKnown RBP5.69□□□□□ -1.5
UBE4A-203ENST00000545354 UNC5DQ6UXZ4 953 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 TTLL7Q6ZT98 887 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 CCHCR1Q8TD31 782 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 IFT81Q8WYA0 676 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 SGCDQ92629 289 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 SDCCAG3Q96C92 435 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 OPTNQ96CV9 577 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 APBA2Q99767 749 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 OSBPL3Q9H4L5 887 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 VCX3AQ9NNX9 186 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 ANO2Q9NQ90 1003 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 PPP1R14DQ9NXH3 145 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 ADAM21Q9UKJ8 722 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 DHX57Q6P158 1386 aaKnown RBP5.69□□□□□ -1.5
UBE4A-203ENST00000545354 PALM3A6NDB9 673 aaPredicted RBP5.69□□□□□ -1.5
UBE4A-203ENST00000545354 SPDYE16A6NNV3 312 aaPredicted RBP5.69□□□□□ -1.5
UBE4A-203ENST00000545354 ZSCAN12O43309 604 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 TSC22D2O75157 780 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 URI1O94763 535 aaPredicted RBP5.69□□□□□ -1.5
UBE4A-203ENST00000545354 SLU7O95391 586 aaKnown RBP5.69□□□□□ -1.5
UBE4A-203ENST00000545354 MBD3O95983 291 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 PCP11498 1178 aaKnown RBP5.69□□□□□ -1.5
UBE4A-203ENST00000545354 TMOD1P28289 359 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 KPNA1P52294 538 aaPredicted RBP5.69□□□□□ -1.5
UBE4A-203ENST00000545354 RAB3GAP1Q15042 981 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 NDUFA5Q16718 116 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 KRT71Q3SY84 523 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 WDR44Q5JSH3 913 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 METTL24Q5JXM2 366 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 NDUFAF5Q5TEU4 345 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 DMRTA1Q5VZB9 504 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 ANGPTL8Q6UXH0 198 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 B4GALNT4Q76KP1 1039 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 PHLDB2Q86SQ0 1253 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 ZNF598Q86UK7 904 aaKnown RBP5.69□□□□□ -1.5
UBE4A-203ENST00000545354 NPAS4Q8IUM7 802 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 USP38Q8NB14 1042 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 PPHLN1Q8NEY8 458 aaKnown RBP5.69□□□□□ -1.5
UBE4A-203ENST00000545354 RSAD2Q8WXG1 361 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 FRMD6Q96NE9 622 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 MTMR9Q96QG7 549 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 USP26Q9BXU7 913 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 ADAM33Q9BZ11 813 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 PLEKHA5Q9HAU0 1116 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 PICK1Q9NRD5 415 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.69□□□□□ -1.5
UBE4A-203ENST00000545354 SH3TC1Q8TE82 1336 aa5.69□□□□□ -1.5
UBE4A-203ENST00000545354 SYNJ2BP-COX16A0A087WUM0 186 aa5.68□□□□□ -1.5
UBE4A-203ENST00000545354 TRIM64A6NGJ6 449 aa5.68□□□□□ -1.5
UBE4A-203ENST00000545354 TRIM64BA6NI03 449 aa5.68□□□□□ -1.5
UBE4A-203ENST00000545354 TK2O00142 265 aa5.68□□□□□ -1.5
UBE4A-203ENST00000545354 FSBPO95073 299 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms