RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 ASPMQ8IZT6 3477 aa8.6□□□□□ -1.03
LDHA-223ENST00000545215 H3BRB1 525 aa8.59□□□□□ -1.03
LDHA-223ENST00000545215 PQBP1O60828 265 aaKnown RBP8.59□□□□□ -1.03
LDHA-223ENST00000545215 ABL1P00519 1130 aa8.59□□□□□ -1.03
LDHA-223ENST00000545215 ZNF16P17020 682 aaPredicted RBP8.59□□□□□ -1.03
LDHA-223ENST00000545215 RGS2P41220 211 aa8.59□□□□□ -1.03
LDHA-223ENST00000545215 ZNF211Q13398 564 aaPredicted RBP8.59□□□□□ -1.03
LDHA-223ENST00000545215 PROSER3Q2NL68 480 aa8.59□□□□□ -1.03
LDHA-223ENST00000545215 MFSD14CQ5VZR4 134 aa8.59□□□□□ -1.03
LDHA-223ENST00000545215 COPS6Q7L5N1 327 aa8.59□□□□□ -1.03
LDHA-223ENST00000545215 ANKRD33Q7Z3H0 272 aa8.59□□□□□ -1.03
LDHA-223ENST00000545215 TMEM199Q8N511 208 aa8.59□□□□□ -1.03
LDHA-223ENST00000545215 TSEN2Q8NCE0 465 aaKnown RBP8.59□□□□□ -1.03
LDHA-223ENST00000545215 TDRD7Q8NHU6 1098 aaKnown RBP8.59□□□□□ -1.03
LDHA-223ENST00000545215 NEK9Q8TD19 979 aa8.59□□□□□ -1.03
LDHA-223ENST00000545215 THUMPD2Q9BTF0 503 aaKnown RBP8.59□□□□□ -1.03
LDHA-223ENST00000545215 TUT1Q9H6E5 874 aaKnown RBP8.59□□□□□ -1.03
LDHA-223ENST00000545215 CD209Q9NNX6 404 aa8.59□□□□□ -1.03
LDHA-223ENST00000545215 MINPP1Q9UNW1 487 aa8.59□□□□□ -1.03
LDHA-223ENST00000545215 AGTPBP1Q9UPW5 1226 aa8.59□□□□□ -1.03
LDHA-223ENST00000545215 AFG3L2Q9Y4W6 797 aa8.59□□□□□ -1.03
LDHA-223ENST00000545215 ZHX2Q9Y6X8 837 aa8.59□□□□□ -1.03
LDHA-223ENST00000545215 ANKRD33BA6NCL7 494 aa8.58□□□□□ -1.04
LDHA-223ENST00000545215 IRS4O14654 1257 aaPredicted RBP8.58□□□□□ -1.04
LDHA-223ENST00000545215 IGSF3O75054 1194 aa8.58□□□□□ -1.04
LDHA-223ENST00000545215 LGR5O75473 907 aa8.58□□□□□ -1.04
LDHA-223ENST00000545215 FGBP02675 491 aa8.58□□□□□ -1.04
LDHA-223ENST00000545215 ECM1Q16610 540 aa8.58□□□□□ -1.04
LDHA-223ENST00000545215 CC2D1BQ5T0F9 858 aaKnown RBP8.58□□□□□ -1.04
LDHA-223ENST00000545215 ANKRD18AQ8IVF6 992 aa8.58□□□□□ -1.04
LDHA-223ENST00000545215 GTF3C2Q8WUA4 911 aaPredicted RBP8.58□□□□□ -1.04
LDHA-223ENST00000545215 ARNTL2Q8WYA1 636 aa8.58□□□□□ -1.04
LDHA-223ENST00000545215 KCTD15Q96SI1 283 aaPredicted RBP8.58□□□□□ -1.04
LDHA-223ENST00000545215 APBA2Q99767 749 aa8.58□□□□□ -1.04
LDHA-223ENST00000545215 HINFPQ9BQA5 517 aa8.58□□□□□ -1.04
LDHA-223ENST00000545215 MORF4L1Q9UBU8 362 aa8.58□□□□□ -1.04
LDHA-223ENST00000545215 TBX21Q9UL17 535 aa8.58□□□□□ -1.04
LDHA-223ENST00000545215 FAM50BQ9Y247 325 aa8.58□□□□□ -1.04
LDHA-223ENST00000545215 LEMD3Q9Y2U8 911 aa8.58□□□□□ -1.04
LDHA-223ENST00000545215 DCDC2CA8MYV0 355 aa8.57□□□□□ -1.04
LDHA-223ENST00000545215 DIAPH1O60610 1272 aaKnown RBP8.57□□□□□ -1.04
LDHA-223ENST00000545215 CA3P07451 260 aa8.57□□□□□ -1.04
LDHA-223ENST00000545215 ZXDAP98168 799 aa8.57□□□□□ -1.04
LDHA-223ENST00000545215 CNGB1Q14028 1251 aaPredicted RBP8.57□□□□□ -1.04
LDHA-223ENST00000545215 COL9A3Q14050 684 aaPredicted RBP8.57□□□□□ -1.04
LDHA-223ENST00000545215 RALBP1Q15311 655 aa8.57□□□□□ -1.04
LDHA-223ENST00000545215 LRRC41Q15345 812 aa8.57□□□□□ -1.04
LDHA-223ENST00000545215 TMEM67Q5HYA8 995 aa8.57□□□□□ -1.04
LDHA-223ENST00000545215 KIAA0319Q5VV43 1072 aa8.57□□□□□ -1.04
LDHA-223ENST00000545215 FAM83AQ86UY5 434 aa8.57□□□□□ -1.04
LDHA-223ENST00000545215 TRPV1Q8NER1 839 aa8.57□□□□□ -1.04
LDHA-223ENST00000545215 IL23AQ9NPF7 189 aa8.57□□□□□ -1.04
LDHA-223ENST00000545215 ANO2Q9NQ90 1003 aa8.57□□□□□ -1.04
LDHA-223ENST00000545215 SEPT3Q9UH03 358 aa8.57□□□□□ -1.04
LDHA-223ENST00000545215 PHF24Q9UPV7 400 aa8.57□□□□□ -1.04
LDHA-223ENST00000545215 ADRB1P08588 477 aa8.56□□□□□ -1.04
LDHA-223ENST00000545215 KLRK1P26718 216 aa8.56□□□□□ -1.04
LDHA-223ENST00000545215 DMWDQ09019 674 aa8.56□□□□□ -1.04
LDHA-223ENST00000545215 FKBP5Q13451 457 aaPredicted RBP8.56□□□□□ -1.04
LDHA-223ENST00000545215 RSPO4Q2I0M5 234 aaPredicted RBP8.56□□□□□ -1.04
LDHA-223ENST00000545215 TREML2Q5T2D2 321 aa8.56□□□□□ -1.04
LDHA-223ENST00000545215 GLYCTKQ8IVS8 523 aa8.56□□□□□ -1.04
LDHA-223ENST00000545215 MRRFQ96E11 262 aaKnown RBP8.56□□□□□ -1.04
LDHA-223ENST00000545215 PURBQ96QR8 312 aaKnown RBP8.56□□□□□ -1.04
LDHA-223ENST00000545215 FLRT1Q9NZU1 646 aa8.56□□□□□ -1.04
LDHA-223ENST00000545215 MAP4K5Q9Y4K4 846 aa8.56□□□□□ -1.04
LDHA-223ENST00000545215 DNMT3AQ9Y6K1 912 aaPredicted RBP8.56□□□□□ -1.04
LDHA-223ENST00000545215 SLC4A7Q9Y6M7 1214 aa8.56□□□□□ -1.04
LDHA-223ENST00000545215 ANP32CO43423 234 aa8.55□□□□□ -1.04
LDHA-223ENST00000545215 PTPRAP18433 802 aa8.55□□□□□ -1.04
LDHA-223ENST00000545215 MAPK4P31152 587 aa8.55□□□□□ -1.04
LDHA-223ENST00000545215 SCTRP47872 440 aa8.55□□□□□ -1.04
LDHA-223ENST00000545215 TAP1Q03518 808 aa8.55□□□□□ -1.04
LDHA-223ENST00000545215 TAF7Q15545 349 aaPredicted RBP8.55□□□□□ -1.04
LDHA-223ENST00000545215 CCDC152Q4G0S7 254 aa8.55□□□□□ -1.04
LDHA-223ENST00000545215 INTS6LQ5JSJ4 861 aaKnown RBP8.55□□□□□ -1.04
LDHA-223ENST00000545215 CAPN12Q6ZSI9 719 aa8.55□□□□□ -1.04
LDHA-223ENST00000545215 MCM10Q7L590 875 aa8.55□□□□□ -1.04
LDHA-223ENST00000545215 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.55□□□□□ -1.041e-6■■■■□ 20.5
LDHA-223ENST00000545215 POP1Q99575 1024 aaKnown RBP8.55□□□□□ -1.04
LDHA-223ENST00000545215 MKNK1Q9BUB5 465 aa8.55□□□□□ -1.04
LDHA-223ENST00000545215 ZNF358Q9NW07 568 aa8.55□□□□□ -1.04
LDHA-223ENST00000545215 MIS18AQ9NYP9 233 aa8.55□□□□□ -1.04
LDHA-223ENST00000545215 ZFYVE26Q68DK2 2539 aa8.55□□□□□ -1.04
LDHA-223ENST00000545215 TMEM229AB2RXF0 380 aa8.54□□□□□ -1.04
LDHA-223ENST00000545215 H3BQ06 376 aaPredicted RBP8.54□□□□□ -1.04
LDHA-223ENST00000545215 ERVH48-1M5A8F1 160 aa8.54□□□□□ -1.04
LDHA-223ENST00000545215 U2SURPO15042 1029 aaKnown RBP8.54□□□□□ -1.04
LDHA-223ENST00000545215 CYBAP13498 195 aa8.54□□□□□ -1.04
LDHA-223ENST00000545215 ATP2A2P16615 1042 aaKnown RBP8.54□□□□□ -1.04
LDHA-223ENST00000545215 CACNB3P54284 484 aa8.54□□□□□ -1.04
LDHA-223ENST00000545215 ERVK-9P63128 1117 aa8.54□□□□□ -1.04
LDHA-223ENST00000545215 SIGLEC14Q08ET2 396 aa8.54□□□□□ -1.04
LDHA-223ENST00000545215 FKBP1CQ5VVH2 108 aa8.54□□□□□ -1.04
LDHA-223ENST00000545215 POTEGQ6S5H5 508 aa8.54□□□□□ -1.04
LDHA-223ENST00000545215 OTOP2Q7RTS6 562 aa8.54□□□□□ -1.04
LDHA-223ENST00000545215 GIPC2Q8TF65 315 aa8.54□□□□□ -1.04
LDHA-223ENST00000545215 EDC3Q96F86 508 aaKnown RBP8.54□□□□□ -1.04
LDHA-223ENST00000545215 ASIC4Q96FT7 647 aa8.54□□□□□ -1.04
LDHA-223ENST00000545215 ISCA1Q9BUE6 129 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms