RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 CCDC85BQ15834 202 aaPredicted RBP9.41□□□□□ -0.9
ATXN3-216ENST00000545170 MBIPQ9NS73 344 aa9.41□□□□□ -0.9
ATXN3-216ENST00000545170 ZFP69BQ9UJL9 534 aa9.41□□□□□ -0.9
ATXN3-216ENST00000545170 SNX14Q9Y5W7 946 aa9.41□□□□□ -0.9
ATXN3-216ENST00000545170 SNX5Q9Y5X3 404 aa9.41□□□□□ -0.9
ATXN3-216ENST00000545170 EPN1Q9Y6I3 576 aaPredicted RBP9.41□□□□□ -0.9
ATXN3-216ENST00000545170 BRD1O95696 1058 aa9.41□□□□□ -0.9
ATXN3-216ENST00000545170 SAT1P21673 171 aa9.41□□□□□ -0.9
ATXN3-216ENST00000545170 CYP2C19P33261 490 aa9.41□□□□□ -0.9
ATXN3-216ENST00000545170 DCUN1D2Q6PH85 259 aa9.41□□□□□ -0.9
ATXN3-216ENST00000545170 OLFML1Q6UWY5 402 aa9.41□□□□□ -0.9
ATXN3-216ENST00000545170 TRIML1Q8N9V2 468 aa9.41□□□□□ -0.9
ATXN3-216ENST00000545170 NUDCD1Q96RS6 583 aa9.41□□□□□ -0.9
ATXN3-216ENST00000545170 USP28Q96RU2 1077 aa9.41□□□□□ -0.9
ATXN3-216ENST00000545170 LLPHQ9BRT6 129 aaKnown RBP9.41□□□□□ -0.9
ATXN3-216ENST00000545170 POTEB3A0JP26 581 aa9.4□□□□□ -0.9
ATXN3-216ENST00000545170 GARSP41250 739 aaKnown RBP9.4□□□□□ -0.9
ATXN3-216ENST00000545170 EHHADHQ08426 723 aa9.4□□□□□ -0.9
ATXN3-216ENST00000545170 BIRC3Q13489 604 aa9.4□□□□□ -0.9
ATXN3-216ENST00000545170 KAZNQ674X7 775 aa9.4□□□□□ -0.9
ATXN3-216ENST00000545170 ATG16L1Q676U5 607 aa9.4□□□□□ -0.9
ATXN3-216ENST00000545170 POTEBQ6S5H4 581 aa9.4□□□□□ -0.9
ATXN3-216ENST00000545170 BBOF1Q8ND07 529 aa9.4□□□□□ -0.9
ATXN3-216ENST00000545170 OMA1Q96E52 524 aa9.4□□□□□ -0.9
ATXN3-216ENST00000545170 ADCY3O60266 1144 aa9.4□□□□□ -0.9
ATXN3-216ENST00000545170 DEAF1O75398 565 aaPredicted RBP9.4□□□□□ -0.9
ATXN3-216ENST00000545170 GPC4O75487 556 aa9.4□□□□□ -0.9
ATXN3-216ENST00000545170 GNAQP50148 359 aa9.4□□□□□ -0.9
ATXN3-216ENST00000545170 STX1BP61266 288 aa9.4□□□□□ -0.9
ATXN3-216ENST00000545170 DHX9Q08211 1270 aaKnown RBP9.4□□□□□ -0.9
ATXN3-216ENST00000545170 RMI1Q9H9A7 625 aa9.4□□□□□ -0.9
ATXN3-216ENST00000545170 RAB20Q9NX57 234 aa9.4□□□□□ -0.9
ATXN3-216ENST00000545170 NDE1Q9NXR1 346 aa9.4□□□□□ -0.9
ATXN3-216ENST00000545170 ING2Q9H160 280 aa9.4□□□□□ -0.9
ATXN3-216ENST00000545170 FANCLQ9NW38 375 aa9.4□□□□□ -0.9
ATXN3-216ENST00000545170 GMNCA6NCL1 334 aa9.4□□□□□ -0.9
ATXN3-216ENST00000545170 KRT7P08729 469 aa9.4□□□□□ -0.9
ATXN3-216ENST00000545170 BCRP11274 1271 aa9.4□□□□□ -0.9
ATXN3-216ENST00000545170 TNNI2P48788 182 aa9.4□□□□□ -0.9
ATXN3-216ENST00000545170 RASSF7Q02833 373 aa9.4□□□□□ -0.9
ATXN3-216ENST00000545170 KLC1Q07866 573 aa9.4□□□□□ -0.9
ATXN3-216ENST00000545170 ANO5Q75V66 913 aa9.4□□□□□ -0.9
ATXN3-216ENST00000545170 DCLK2Q8N568 766 aa9.4□□□□□ -0.9
ATXN3-216ENST00000545170 TRIM55Q9BYV6 548 aa9.4□□□□□ -0.9
ATXN3-216ENST00000545170 ZCCHC17Q9NP64 241 aaKnown RBP9.4□□□□□ -0.9
ATXN3-216ENST00000545170 CXCR5P32302 372 aa9.4□□□□□ -0.91
ATXN3-216ENST00000545170 TAB3Q8N5C8 712 aaPredicted RBP9.4□□□□□ -0.91
ATXN3-216ENST00000545170 NDEL1Q9GZM8 345 aa9.4□□□□□ -0.91
ATXN3-216ENST00000545170 CARD9Q9H257 536 aa9.4□□□□□ -0.91
ATXN3-216ENST00000545170 TBC1D7Q9P0N9 293 aa9.4□□□□□ -0.91
ATXN3-216ENST00000545170 H3BRJ5 948 aa9.4□□□□□ -0.91
ATXN3-216ENST00000545170 TOM1L1O75674 476 aa9.4□□□□□ -0.91
ATXN3-216ENST00000545170 SCG2P13521 617 aa9.4□□□□□ -0.91
ATXN3-216ENST00000545170 SLFNL1Q499Z3 407 aa9.4□□□□□ -0.91
ATXN3-216ENST00000545170 TRIM59Q8IWR1 403 aa9.4□□□□□ -0.91
ATXN3-216ENST00000545170 FAM186BQ8IYM0 893 aa9.4□□□□□ -0.91
ATXN3-216ENST00000545170 SNX29Q8TEQ0 813 aa9.4□□□□□ -0.91
ATXN3-216ENST00000545170 FNBP1Q96RU3 617 aa9.4□□□□□ -0.91
ATXN3-216ENST00000545170 EHD2Q9NZN4 543 aa9.4□□□□□ -0.91
ATXN3-216ENST00000545170 COPG1Q9Y678 874 aaKnown RBP9.4□□□□□ -0.91
ATXN3-216ENST00000545170 SLC27A2O14975 620 aa9.39□□□□□ -0.91
ATXN3-216ENST00000545170 TRIM16O95361 564 aa9.39□□□□□ -0.91
ATXN3-216ENST00000545170 POMGNT1Q8WZA1 660 aa9.39□□□□□ -0.91
ATXN3-216ENST00000545170 PITPNM3Q9BZ71 974 aa9.39□□□□□ -0.91
ATXN3-216ENST00000545170 CRNKL1Q9BZJ0 848 aaKnown RBP9.39□□□□□ -0.91
ATXN3-216ENST00000545170 CCDC90BQ9GZT6 254 aa9.39□□□□□ -0.91
ATXN3-216ENST00000545170 ETAA1Q9NY74 926 aa9.39□□□□□ -0.91
ATXN3-216ENST00000545170 ANKIB1Q9P2G1 1089 aa9.39□□□□□ -0.91
ATXN3-216ENST00000545170 SERTAD1Q9UHV2 236 aa9.39□□□□□ -0.91
ATXN3-216ENST00000545170 ERCC6Q03468 1493 aa9.39□□□□□ -0.91
ATXN3-216ENST00000545170 PIK3R4Q99570 1358 aa9.39□□□□□ -0.91
ATXN3-216ENST00000545170 CCNT1O60563 726 aaKnown RBP9.39□□□□□ -0.91
ATXN3-216ENST00000545170 PLTPP55058 493 aa9.39□□□□□ -0.91
ATXN3-216ENST00000545170 CRYMQ14894 314 aa9.39□□□□□ -0.91
ATXN3-216ENST00000545170 RFX8Q6ZV50 586 aa9.39□□□□□ -0.91
ATXN3-216ENST00000545170 CCDC84Q86UT8 332 aaPredicted RBP9.39□□□□□ -0.91
ATXN3-216ENST00000545170 MCF2L2Q86YR7 1114 aa9.39□□□□□ -0.91
ATXN3-216ENST00000545170 STX18Q9P2W9 335 aaKnown RBP9.39□□□□□ -0.91
ATXN3-216ENST00000545170 ZBTB21Q9ULJ3 1066 aa9.39□□□□□ -0.91
ATXN3-216ENST00000545170 NCOA1Q15788 1441 aa9.39□□□□□ -0.91
ATXN3-216ENST00000545170 RHOBTB1O94844 696 aa9.39□□□□□ -0.91
ATXN3-216ENST00000545170 NPR1P16066 1061 aa9.39□□□□□ -0.91
ATXN3-216ENST00000545170 DACH2Q96NX9 599 aa9.39□□□□□ -0.91
ATXN3-216ENST00000545170 C10orf88Q9H8K7 445 aa9.39□□□□□ -0.91
ATXN3-216ENST00000545170 CAMSAP2Q08AD1 1489 aa9.39□□□□□ -0.91
ATXN3-216ENST00000545170 CAND2O75155 1236 aa9.39□□□□□ -0.91
ATXN3-216ENST00000545170 PDE5AO76074 875 aa9.39□□□□□ -0.91
ATXN3-216ENST00000545170 RBL2Q08999 1139 aa9.39□□□□□ -0.91
ATXN3-216ENST00000545170 UBE3BQ7Z3V4 1068 aa9.39□□□□□ -0.91
ATXN3-216ENST00000545170 MYLK4Q86YV6 388 aaPredicted RBP9.39□□□□□ -0.91
ATXN3-216ENST00000545170 UPF3AQ9H1J1 476 aaKnown RBP9.39□□□□□ -0.91
ATXN3-216ENST00000545170 NCOA5Q9HCD5 579 aaKnown RBP9.39□□□□□ -0.91
ATXN3-216ENST00000545170 CD248Q9HCU0 757 aa9.39□□□□□ -0.91
ATXN3-216ENST00000545170 SMYD2Q9NRG4 433 aa9.39□□□□□ -0.91
ATXN3-216ENST00000545170 PYGBP11216 843 aa9.39□□□□□ -0.91
ATXN3-216ENST00000545170 PIK3AP1Q6ZUJ8 805 aa9.39□□□□□ -0.91
ATXN3-216ENST00000545170 ARHGAP45Q92619 1136 aa9.39□□□□□ -0.91
ATXN3-216ENST00000545170 TESK2Q96S53 571 aa9.39□□□□□ -0.91
ATXN3-216ENST00000545170 PAG1Q9NWQ8 432 aa9.39□□□□□ -0.91
ATXN3-216ENST00000545170 NCOA2Q15596 1464 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms