RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 EPOPA6NHQ4 379 aa11.35□□□□□ -0.59
CHD4-212ENST00000545083 AAK1Q2M2I8 961 aa11.35□□□□□ -0.59
CHD4-212ENST00000545083 TMEM31Q5JXX7 168 aa11.35□□□□□ -0.59
CHD4-212ENST00000545083 CXCL17Q6UXB2 119 aa11.35□□□□□ -0.59
CHD4-212ENST00000545083 ZNF467Q7Z7K2 595 aaPredicted RBP11.35□□□□□ -0.59
CHD4-212ENST00000545083 FRAT1Q92837 279 aaPredicted RBP11.35□□□□□ -0.59
CHD4-212ENST00000545083 CCDC17Q96LX7 622 aa11.35□□□□□ -0.59
CHD4-212ENST00000545083 NOC4LQ9BVI4 516 aaKnown RBP11.35□□□□□ -0.59
CHD4-212ENST00000545083 MTIF3Q9H2K0 278 aaKnown RBP11.35□□□□□ -0.59
CHD4-212ENST00000545083 SPC25Q9HBM1 224 aa11.35□□□□□ -0.59
CHD4-212ENST00000545083 PCDHA11Q9Y5I1 949 aa11.35□□□□□ -0.59
CHD4-212ENST00000545083 FAM86C2PA6NEL3 165 aa11.34□□□□□ -0.59
CHD4-212ENST00000545083 IPO8O15397 1037 aaKnown RBP11.34□□□□□ -0.59
CHD4-212ENST00000545083 TLL1O43897 1013 aa11.34□□□□□ -0.59
CHD4-212ENST00000545083 RAD21O60216 631 aa11.34□□□□□ -0.59
CHD4-212ENST00000545083 ARHGEF15O94989 841 aa11.34□□□□□ -0.59
CHD4-212ENST00000545083 POU3F3P20264 500 aaPredicted RBP11.34□□□□□ -0.59
CHD4-212ENST00000545083 SLC4A3P48751 1232 aa11.34□□□□□ -0.59
CHD4-212ENST00000545083 NKX3-2P78367 333 aa11.34□□□□□ -0.59
CHD4-212ENST00000545083 C12orf60Q5U649 245 aa11.34□□□□□ -0.59
CHD4-212ENST00000545083 ARMCX2Q7L311 632 aa11.34□□□□□ -0.59
CHD4-212ENST00000545083 AACSQ86V21 672 aa11.34□□□□□ -0.59
CHD4-212ENST00000545083 SCLYQ96I15 445 aa11.34□□□□□ -0.59
CHD4-212ENST00000545083 SLF1Q9BQI6 1058 aa11.34□□□□□ -0.59
CHD4-212ENST00000545083 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.34□□□□□ -0.59
CHD4-212ENST00000545083 TRPV6Q9H1D0 765 aa11.34□□□□□ -0.59
CHD4-212ENST00000545083 ABHD16BQ9H3Z7 469 aa11.34□□□□□ -0.59
CHD4-212ENST00000545083 KANSL2Q9H9L4 492 aa11.34□□□□□ -0.59
CHD4-212ENST00000545083 CERS4Q9HA82 394 aa11.34□□□□□ -0.59
CHD4-212ENST00000545083 SLC4A7Q9Y6M7 1214 aa11.34□□□□□ -0.59
CHD4-212ENST00000545083 MCM3APO60318 1980 aa11.34□□□□□ -0.59
CHD4-212ENST00000545083 BRWD1Q9NSI6 2320 aa11.34□□□□□ -0.59
CHD4-212ENST00000545083 ZBBXA8MT70 800 aa11.33□□□□□ -0.6
CHD4-212ENST00000545083 CA3P07451 260 aa11.33□□□□□ -0.6
CHD4-212ENST00000545083 ATP2A2P16615 1042 aaKnown RBP11.33□□□□□ -0.6
CHD4-212ENST00000545083 TTLL4Q14679 1199 aa11.33□□□□□ -0.6
CHD4-212ENST00000545083 C16orf86Q6ZW13 317 aa11.33□□□□□ -0.6
CHD4-212ENST00000545083 CCDC144CPQ8IYA2 1237 aa11.33□□□□□ -0.6
CHD4-212ENST00000545083 CPXCR1Q8N123 301 aa11.33□□□□□ -0.6
CHD4-212ENST00000545083 GOPCQ9HD26 462 aa11.33□□□□□ -0.6
CHD4-212ENST00000545083 DDX49Q9Y6V7 483 aaKnown RBP11.33□□□□□ -0.6
CHD4-212ENST00000545083 USP17L12C9JPN9 530 aa11.32□□□□□ -0.6
CHD4-212ENST00000545083 USP17L21D6R901 530 aa11.32□□□□□ -0.6
CHD4-212ENST00000545083 GOLIM4O00461 696 aa11.32□□□□□ -0.6
CHD4-212ENST00000545083 ATP2A1O14983 1001 aa11.32□□□□□ -0.6
CHD4-212ENST00000545083 B4GALT4O60513 344 aa11.32□□□□□ -0.6
CHD4-212ENST00000545083 GPR37L1O60883 481 aa11.32□□□□□ -0.6
CHD4-212ENST00000545083 MBD4O95243 580 aa11.32□□□□□ -0.6
CHD4-212ENST00000545083 CHGBP05060 677 aa11.32□□□□□ -0.6
CHD4-212ENST00000545083 PSMC6P62333 389 aa11.32□□□□□ -0.6
CHD4-212ENST00000545083 ITGA7Q13683 1181 aa11.32□□□□□ -0.6
CHD4-212ENST00000545083 TTF1Q15361 905 aaPredicted RBP11.32□□□□□ -0.6
CHD4-212ENST00000545083 TMEM63BQ5T3F8 832 aa11.32□□□□□ -0.6
CHD4-212ENST00000545083 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.32□□□□□ -0.6
CHD4-212ENST00000545083 SPRED2Q7Z698 418 aa11.32□□□□□ -0.6
CHD4-212ENST00000545083 ALYREFQ86V81 257 aaKnown RBP11.32□□□□□ -0.6
CHD4-212ENST00000545083 AGBL1Q96MI9 1066 aa11.32□□□□□ -0.6
CHD4-212ENST00000545083 RAVER2Q9HCJ3 691 aaKnown RBP11.32□□□□□ -0.6
CHD4-212ENST00000545083 CD320Q9NPF0 282 aa11.32□□□□□ -0.6
CHD4-212ENST00000545083 EXOC6BQ9Y2D4 811 aa11.32□□□□□ -0.6
CHD4-212ENST00000545083 MYH8P13535 1937 aa11.32□□□□□ -0.6
CHD4-212ENST00000545083 LRRC37A2A6NM11 1700 aa11.32□□□□□ -0.6
CHD4-212ENST00000545083 BAZ2AQ9UIF9 1905 aaKnown RBP11.31□□□□□ -0.6
CHD4-212ENST00000545083 GTPBP6O43824 516 aaPredicted RBP11.31□□□□□ -0.6
CHD4-212ENST00000545083 NDUFB10O96000 172 aa11.31□□□□□ -0.6
CHD4-212ENST00000545083 CNTN2Q02246 1040 aa11.31□□□□□ -0.6
CHD4-212ENST00000545083 TNFAIP2Q03169 654 aa11.31□□□□□ -0.6
CHD4-212ENST00000545083 TMEM67Q5HYA8 995 aa11.31□□□□□ -0.6
CHD4-212ENST00000545083 ANKRD35Q8N283 1001 aa11.31□□□□□ -0.6
CHD4-212ENST00000545083 DNAJC2Q99543 621 aaKnown RBP11.31□□□□□ -0.6
CHD4-212ENST00000545083 IL1RAPL2Q9NP60 686 aa11.31□□□□□ -0.6
CHD4-212ENST00000545083 ATP8A2Q9NTI2 1148 aa11.31□□□□□ -0.6
CHD4-212ENST00000545083 COG5Q9UP83 839 aa11.31□□□□□ -0.6
CHD4-212ENST00000545083 GNEQ9Y223 722 aaKnown RBP11.31□□□□□ -0.6
CHD4-212ENST00000545083 SOWAHBA6NEL2 793 aa11.3□□□□□ -0.6
CHD4-212ENST00000545083 F5H6K3 240 aa11.3□□□□□ -0.6
CHD4-212ENST00000545083 ADD2P35612 726 aa11.3□□□□□ -0.6
CHD4-212ENST00000545083 KLRC3Q07444 240 aa11.3□□□□□ -0.6
CHD4-212ENST00000545083 FSCN1Q16658 493 aaKnown RBP11.3□□□□□ -0.6
CHD4-212ENST00000545083 NOL8Q76FK4 1167 aaKnown RBP11.3□□□□□ -0.6
CHD4-212ENST00000545083 TLK2Q86UE8 772 aa11.3□□□□□ -0.6
CHD4-212ENST00000545083 RPUSD2Q8IZ73 545 aaKnown RBP11.3□□□□□ -0.6
CHD4-212ENST00000545083 PRPF38AQ8NAV1 312 aaKnown RBP11.3□□□□□ -0.6
CHD4-212ENST00000545083 SLC38A10Q9HBR0 1119 aa11.3□□□□□ -0.6
CHD4-212ENST00000545083 ZBED9Q6R2W3 1325 aa11.3□□□□□ -0.6
CHD4-212ENST00000545083 PI4K2BG5E9Z4 385 aa11.29□□□□□ -0.6
CHD4-212ENST00000545083 DYNC1LI2O43237 492 aaPredicted RBP11.29□□□□□ -0.6
CHD4-212ENST00000545083 LPXNO60711 386 aa11.29□□□□□ -0.6
CHD4-212ENST00000545083 ZBED4O75132 1171 aa11.29□□□□□ -0.6
CHD4-212ENST00000545083 CABYRO75952 493 aa11.29□□□□□ -0.6
CHD4-212ENST00000545083 CYP2C9P11712 490 aa11.29□□□□□ -0.6
CHD4-212ENST00000545083 SMPD1P17405 629 aa11.29□□□□□ -0.6
CHD4-212ENST00000545083 TAP1Q03518 808 aa11.29□□□□□ -0.6
CHD4-212ENST00000545083 CEP85Q6P2H3 762 aa11.29□□□□□ -0.6
CHD4-212ENST00000545083 CTR9Q6PD62 1173 aa11.29□□□□□ -0.6
CHD4-212ENST00000545083 DEFB128Q7Z7B8 93 aa11.29□□□□□ -0.6
CHD4-212ENST00000545083 FAM133AQ8N9E0 248 aa11.29□□□□□ -0.6
CHD4-212ENST00000545083 ARNTL2Q8WYA1 636 aa11.29□□□□□ -0.6
CHD4-212ENST00000545083 HLA-CQ95604 372 aa11.29□□□□□ -0.6
CHD4-212ENST00000545083 KIFC2Q96AC6 838 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms