RNA–Protein interactions for RNA: ENST00000544972.1

TNC-213, Transcript of tenascin C, humanhuman

TSL 5

Gene TNC, Length 1,844 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-213ENST00000544972 KIAA1683Q9H0B3 1180 aa13□□□□□ -0.33
TNC-213ENST00000544972 FBXO2Q9UK22 296 aaPredicted RBP13□□□□□ -0.33
TNC-213ENST00000544972 PRR12Q9ULL5 1215 aa13□□□□□ -0.33
TNC-213ENST00000544972 PHIPQ8WWQ0 1821 aa13□□□□□ -0.33
TNC-213ENST00000544972 CCDC194A0A1B0GVG4 234 aa12.99□□□□□ -0.33
TNC-213ENST00000544972 A0A1B0GVL5 298 aa12.99□□□□□ -0.33
TNC-213ENST00000544972 PLA2G6O60733 806 aa12.99□□□□□ -0.33
TNC-213ENST00000544972 EPHX2P34913 555 aa12.99□□□□□ -0.33
TNC-213ENST00000544972 STAT2P52630 851 aa12.99□□□□□ -0.33
TNC-213ENST00000544972 SNAP25P60880 206 aa12.99□□□□□ -0.33
TNC-213ENST00000544972 GRIN1Q05586 938 aa12.99□□□□□ -0.33
TNC-213ENST00000544972 ZNF174Q15697 407 aa12.99□□□□□ -0.33
TNC-213ENST00000544972 SUPT20HL1Q3ZLR7 823 aa12.99□□□□□ -0.33
TNC-213ENST00000544972 USP50Q70EL3 339 aaPredicted RBP12.99□□□□□ -0.33
TNC-213ENST00000544972 FMR1NBQ8N0W7 255 aaPredicted RBP12.99□□□□□ -0.33
TNC-213ENST00000544972 DCPSQ96C86 337 aaKnown RBP12.99□□□□□ -0.33
TNC-213ENST00000544972 DDX19AQ9NUU7 478 aaKnown RBP12.99□□□□□ -0.33
TNC-213ENST00000544972 CEP131Q9UPN4 1083 aa12.99□□□□□ -0.33
TNC-213ENST00000544972 SCN4AP35499 1836 aa12.99□□□□□ -0.33
TNC-213ENST00000544972 POTECB2RU33 542 aa12.99□□□□□ -0.33
TNC-213ENST00000544972 ADM5C9JUS6 153 aa12.99□□□□□ -0.33
TNC-213ENST00000544972 CUTAO60888 179 aa12.99□□□□□ -0.33
TNC-213ENST00000544972 PTPRAP18433 802 aa12.99□□□□□ -0.33
TNC-213ENST00000544972 ADCY7P51828 1080 aa12.99□□□□□ -0.33
TNC-213ENST00000544972 NDUFA8P51970 172 aa12.99□□□□□ -0.33
TNC-213ENST00000544972 FAM160A1Q05DH4 1040 aa12.99□□□□□ -0.33
TNC-213ENST00000544972 IKQ13123 557 aaPredicted RBP12.99□□□□□ -0.33
TNC-213ENST00000544972 INF2Q27J81 1249 aa12.99□□□□□ -0.33
TNC-213ENST00000544972 LRSAM1Q6UWE0 723 aa12.99□□□□□ -0.33
TNC-213ENST00000544972 KRT25Q7Z3Z0 450 aa12.99□□□□□ -0.33
TNC-213ENST00000544972 REXO1Q8N1G1 1221 aaKnown RBP12.99□□□□□ -0.33
TNC-213ENST00000544972 KRI1Q8N9T8 703 aaKnown RBP12.99□□□□□ -0.33
TNC-213ENST00000544972 FEZ1Q99689 392 aa12.99□□□□□ -0.33
TNC-213ENST00000544972 CLSTN2Q9H4D0 955 aa12.99□□□□□ -0.33
TNC-213ENST00000544972 RIC8AQ9NPQ8 531 aa12.99□□□□□ -0.33
TNC-213ENST00000544972 TMEM260Q9NX78 707 aa12.99□□□□□ -0.33
TNC-213ENST00000544972 BIN2Q9UBW5 565 aaPredicted RBP12.99□□□□□ -0.33
TNC-213ENST00000544972 SRPRBQ9Y5M8 271 aaKnown RBP12.99□□□□□ -0.33
TNC-213ENST00000544972 PAPPA2Q9BXP8 1791 aa12.99□□□□□ -0.33
TNC-213ENST00000544972 SMCHD1A6NHR9 2005 aa12.99□□□□□ -0.33
TNC-213ENST00000544972 FAM237AA0A1B0GTK4 181 aa12.98□□□□□ -0.33
TNC-213ENST00000544972 USP2O75604 605 aaPredicted RBP12.98□□□□□ -0.33
TNC-213ENST00000544972 DEKP35659 375 aaKnown RBP12.98□□□□□ -0.33
TNC-213ENST00000544972 CLK2P49760 499 aaKnown RBP12.98□□□□□ -0.33
TNC-213ENST00000544972 DGKZQ13574 1117 aa12.98□□□□□ -0.33
TNC-213ENST00000544972 CAMK4Q16566 473 aa12.98□□□□□ -0.33
TNC-213ENST00000544972 CCDC73Q6ZRK6 1079 aa12.98□□□□□ -0.33
TNC-213ENST00000544972 SULF1Q8IWU6 871 aa12.98□□□□□ -0.33
TNC-213ENST00000544972 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.98□□□□□ -0.33
TNC-213ENST00000544972 WDR18Q9BV38 432 aa12.98□□□□□ -0.33
TNC-213ENST00000544972 NUP62CLQ9H1M0 184 aa12.98□□□□□ -0.33
TNC-213ENST00000544972 HPSEQ9Y251 543 aa12.98□□□□□ -0.33
TNC-213ENST00000544972 PCDHA1Q9Y5I3 950 aa12.98□□□□□ -0.33
TNC-213ENST00000544972 GOLGA6L3A6NEY3 463 aa12.97□□□□□ -0.33
TNC-213ENST00000544972 EDIL3O43854 480 aa12.97□□□□□ -0.33
TNC-213ENST00000544972 LETM1O95202 739 aaPredicted RBP12.97□□□□□ -0.33
TNC-213ENST00000544972 BMP15O95972 392 aa12.97□□□□□ -0.33
TNC-213ENST00000544972 PFKFB1P16118 471 aa12.97□□□□□ -0.33
TNC-213ENST00000544972 ATP2C1P98194 919 aaPredicted RBP12.97□□□□□ -0.33
TNC-213ENST00000544972 PTGDRQ13258 359 aa12.97□□□□□ -0.33
TNC-213ENST00000544972 NONOQ15233 471 aaKnown RBP eCLIP12.97□□□□□ -0.33
TNC-213ENST00000544972 NOL9Q5SY16 702 aaKnown RBP12.97□□□□□ -0.33
TNC-213ENST00000544972 JAKMIP3Q5VZ66 844 aa12.97□□□□□ -0.33
TNC-213ENST00000544972 RESP18Q5W5W9 173 aa12.97□□□□□ -0.33
TNC-213ENST00000544972 RBM43Q6ZSC3 357 aaKnown RBP12.97□□□□□ -0.33
TNC-213ENST00000544972 KRT26Q7Z3Y9 468 aa12.97□□□□□ -0.33
TNC-213ENST00000544972 FBXO11Q86XK2 927 aa12.97□□□□□ -0.33
TNC-213ENST00000544972 C4orf32Q8N8J7 132 aa12.97□□□□□ -0.33
TNC-213ENST00000544972 ZC3H15Q8WU90 426 aaKnown RBP12.97□□□□□ -0.33
TNC-213ENST00000544972 CHURC1Q8WUH1 139 aa12.97□□□□□ -0.33
TNC-213ENST00000544972 LPAR1Q92633 364 aa12.97□□□□□ -0.33
TNC-213ENST00000544972 AMNQ9BXJ7 453 aa12.97□□□□□ -0.33
TNC-213ENST00000544972 EMILIN3Q9NT22 766 aa12.97□□□□□ -0.33
TNC-213ENST00000544972 FBXO28Q9NVF7 368 aa12.97□□□□□ -0.33
TNC-213ENST00000544972 WDR46O15213 610 aaKnown RBP12.97□□□□□ -0.33
TNC-213ENST00000544972 TAL1P17542 331 aaPredicted RBP12.97□□□□□ -0.33
TNC-213ENST00000544972 MCM7P33993 719 aa12.97□□□□□ -0.33
TNC-213ENST00000544972 SPP2Q13103 211 aa12.97□□□□□ -0.33
TNC-213ENST00000544972 MTMR2Q13614 643 aa12.97□□□□□ -0.33
TNC-213ENST00000544972 UBE2SQ16763 222 aa12.97□□□□□ -0.33
TNC-213ENST00000544972 FAM160B2Q86V87 743 aa12.97□□□□□ -0.33
TNC-213ENST00000544972 ZNF579Q8NAF0 562 aaKnown RBP12.97□□□□□ -0.33
TNC-213ENST00000544972 CUL5Q93034 780 aa12.97□□□□□ -0.33
TNC-213ENST00000544972 FUCA2Q9BTY2 467 aa12.97□□□□□ -0.33
TNC-213ENST00000544972 RANBP17Q9H2T7 1088 aaKnown RBP12.97□□□□□ -0.33
TNC-213ENST00000544972 TAF1DQ9H5J8 278 aaPredicted RBP12.97□□□□□ -0.33
TNC-213ENST00000544972 PSTPIP2Q9H939 334 aa12.97□□□□□ -0.33
TNC-213ENST00000544972 PICK1Q9NRD5 415 aa12.97□□□□□ -0.33
TNC-213ENST00000544972 FEM1BQ9UK73 627 aa12.97□□□□□ -0.33
TNC-213ENST00000544972 WDR90Q96KV7 1748 aa12.97□□□□□ -0.33
TNC-213ENST00000544972 OPLAHO14841 1288 aa12.96□□□□□ -0.33
TNC-213ENST00000544972 MRPL12P52815 198 aaKnown RBP12.96□□□□□ -0.33
TNC-213ENST00000544972 BACE1P56817 501 aa12.96□□□□□ -0.33
TNC-213ENST00000544972 PRKG1Q13976 671 aa12.96□□□□□ -0.33
TNC-213ENST00000544972 SPECC1Q5M775 1068 aa12.96□□□□□ -0.33
TNC-213ENST00000544972 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.96□□□□□ -0.33
TNC-213ENST00000544972 ZNF280CQ8ND82 737 aa12.96□□□□□ -0.33
TNC-213ENST00000544972 TBCKQ8TEA7 893 aa12.96□□□□□ -0.33
TNC-213ENST00000544972 TNMDQ9H2S6 317 aa12.96□□□□□ -0.33
TNC-213ENST00000544972 OTOFQ9HC10 1997 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms