RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 SLC38A10Q9HBR0 1119 aa14.71□□□□□ -0.05
ACTN1-206ENST00000544964 SYNGAP1Q96PV0 1343 aa14.7□□□□□ -0.06
ACTN1-206ENST00000544964 SYNRGQ9UMZ2 1314 aa14.7□□□□□ -0.06
ACTN1-206ENST00000544964 TRIM43BA6NCK2 446 aa14.7□□□□□ -0.06
ACTN1-206ENST00000544964 SNAI1O95863 264 aaPredicted RBP14.7□□□□□ -0.06
ACTN1-206ENST00000544964 TTLL1O95922 423 aa14.7□□□□□ -0.06
ACTN1-206ENST00000544964 AKR1A1P14550 325 aa14.7□□□□□ -0.06
ACTN1-206ENST00000544964 C9orf50Q5SZB4 431 aa14.7□□□□□ -0.06
ACTN1-206ENST00000544964 MAMDC4Q6UXC1 1216 aa14.7□□□□□ -0.06
ACTN1-206ENST00000544964 MSL3Q8N5Y2 521 aaKnown RBP14.7□□□□□ -0.06
ACTN1-206ENST00000544964 NEDD1Q8NHV4 660 aa14.7□□□□□ -0.06
ACTN1-206ENST00000544964 KIFC2Q96AC6 838 aa14.7□□□□□ -0.06
ACTN1-206ENST00000544964 TRIM43Q96BQ3 446 aaPredicted RBP14.7□□□□□ -0.06
ACTN1-206ENST00000544964 RAVER2Q9HCJ3 691 aaKnown RBP14.7□□□□□ -0.06
ACTN1-206ENST00000544964 PRDM5Q9NQX1 630 aaPredicted RBP14.7□□□□□ -0.06
ACTN1-206ENST00000544964 PRKAG2Q9UGJ0 569 aa14.7□□□□□ -0.06
ACTN1-206ENST00000544964 STXBP5LQ9Y2K9 1186 aa14.7□□□□□ -0.06
ACTN1-206ENST00000544964 PRUNE2Q8WUY3 3088 aa14.7□□□□□ -0.06
ACTN1-206ENST00000544964 ZMYM6O95789 1325 aa14.69□□□□□ -0.06
ACTN1-206ENST00000544964 A0A1W2PQ45 241 aaPredicted RBP14.69□□□□□ -0.06
ACTN1-206ENST00000544964 A0A1W2PQY0 241 aa14.69□□□□□ -0.06
ACTN1-206ENST00000544964 POTEB2H3BUK9 544 aa14.69□□□□□ -0.06
ACTN1-206ENST00000544964 ADCY6O43306 1168 aa14.69□□□□□ -0.06
ACTN1-206ENST00000544964 ITGB8P26012 769 aa14.69□□□□□ -0.06
ACTN1-206ENST00000544964 RASGRP2Q7LDG7 609 aa14.69□□□□□ -0.06
ACTN1-206ENST00000544964 ZNF444Q8N0Y2 327 aaPredicted RBP14.69□□□□□ -0.06
ACTN1-206ENST00000544964 CPXCR1Q8N123 301 aa14.69□□□□□ -0.06
ACTN1-206ENST00000544964 MAP4K1Q92918 833 aa14.69□□□□□ -0.06
ACTN1-206ENST00000544964 ZNF287Q9HBT7 754 aa14.69□□□□□ -0.06
ACTN1-206ENST00000544964 INCENPQ9NQS7 918 aa14.69□□□□□ -0.06
ACTN1-206ENST00000544964 FEM1BQ9UK73 627 aa14.69□□□□□ -0.06
ACTN1-206ENST00000544964 CNPY2Q9Y2B0 182 aa14.69□□□□□ -0.06
ACTN1-206ENST00000544964 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.69□□□□□ -0.06
ACTN1-206ENST00000544964 RBM8AQ9Y5S9 174 aaKnown RBP14.69□□□□□ -0.06
ACTN1-206ENST00000544964 U3KPZ7 1027 aaPredicted RBP14.69□□□□□ -0.06
ACTN1-206ENST00000544964 MYADML2A6NDP7 307 aa14.68□□□□□ -0.06
ACTN1-206ENST00000544964 OAZ1P54368 228 aa14.68□□□□□ -0.06
ACTN1-206ENST00000544964 TLE2Q04725 743 aa14.68□□□□□ -0.06
ACTN1-206ENST00000544964 SHHQ15465 462 aa14.68□□□□□ -0.06
ACTN1-206ENST00000544964 C8orf34Q49A92 452 aa14.68□□□□□ -0.06
ACTN1-206ENST00000544964 FAM109BQ6ICB4 259 aaPredicted RBP14.68□□□□□ -0.06
ACTN1-206ENST00000544964 ZNF467Q7Z7K2 595 aaPredicted RBP14.68□□□□□ -0.06
ACTN1-206ENST00000544964 RNF180Q86T96 592 aa14.68□□□□□ -0.06
ACTN1-206ENST00000544964 SLC17A8Q8NDX2 589 aa14.68□□□□□ -0.06
ACTN1-206ENST00000544964 BADQ92934 168 aa14.68□□□□□ -0.06
ACTN1-206ENST00000544964 GUCD1Q96NT3 240 aa14.68□□□□□ -0.06
ACTN1-206ENST00000544964 CTNNA3Q9UI47 895 aa14.68□□□□□ -0.06
ACTN1-206ENST00000544964 TACC3Q9Y6A5 838 aa14.68□□□□□ -0.06
ACTN1-206ENST00000544964 LAMA4Q16363 1823 aa14.68□□□□□ -0.06
ACTN1-206ENST00000544964 ZNF536O15090 1300 aa14.67□□□□□ -0.06
ACTN1-206ENST00000544964 ZNF213O14771 459 aa14.67□□□□□ -0.06
ACTN1-206ENST00000544964 ZBED4O75132 1171 aa14.67□□□□□ -0.06
ACTN1-206ENST00000544964 TSPY3P0CV98 308 aa14.67□□□□□ -0.06
ACTN1-206ENST00000544964 TSPY8P0CW00 308 aa14.67□□□□□ -0.06
ACTN1-206ENST00000544964 TFAP4Q01664 338 aa14.67□□□□□ -0.06
ACTN1-206ENST00000544964 PDE4BQ07343 736 aa14.67□□□□□ -0.06
ACTN1-206ENST00000544964 IMMTQ16891 758 aaKnown RBP14.67□□□□□ -0.06
ACTN1-206ENST00000544964 SLFN13Q68D06 897 aa14.67□□□□□ -0.06
ACTN1-206ENST00000544964 CCSAPQ6IQ19 270 aaPredicted RBP14.67□□□□□ -0.06
ACTN1-206ENST00000544964 TBC1D10CQ8IV04 446 aa14.67□□□□□ -0.06
ACTN1-206ENST00000544964 KLHDC9Q8NEP7 349 aa14.67□□□□□ -0.06
ACTN1-206ENST00000544964 DDX11Q96FC9 970 aa14.67□□□□□ -0.06
ACTN1-206ENST00000544964 GMCL1Q96IK5 515 aa14.67□□□□□ -0.06
ACTN1-206ENST00000544964 KATNBL1Q9H079 304 aa14.67□□□□□ -0.06
ACTN1-206ENST00000544964 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.67□□□□□ -0.06
ACTN1-206ENST00000544964 ANAPC4Q9UJX5 808 aa14.67□□□□□ -0.06
ACTN1-206ENST00000544964 REC8O95072 547 aa14.66□□□□□ -0.06
ACTN1-206ENST00000544964 SEC24BO95487 1268 aa14.66□□□□□ -0.06
ACTN1-206ENST00000544964 SLC3A2P08195 630 aaKnown RBP14.66□□□□□ -0.06
ACTN1-206ENST00000544964 CYP21A2P08686 494 aa14.66□□□□□ -0.06
ACTN1-206ENST00000544964 CLTBP09497 229 aa14.66□□□□□ -0.06
ACTN1-206ENST00000544964 BMP3P12645 472 aa14.66□□□□□ -0.06
ACTN1-206ENST00000544964 SLC4A3P48751 1232 aa14.66□□□□□ -0.06
ACTN1-206ENST00000544964 ACLYP53396 1101 aa14.66□□□□□ -0.06
ACTN1-206ENST00000544964 IRX5P78411 483 aaPredicted RBP14.66□□□□□ -0.06
ACTN1-206ENST00000544964 CHST13Q8NET6 341 aa14.66□□□□□ -0.06
ACTN1-206ENST00000544964 IL17RBQ9NRM6 502 aa14.66□□□□□ -0.06
ACTN1-206ENST00000544964 ZHX1Q9UKY1 873 aaPredicted RBP14.66□□□□□ -0.06
ACTN1-206ENST00000544964 TAF6LQ9Y6J9 622 aa14.66□□□□□ -0.06
ACTN1-206ENST00000544964 TMEM232C9JQI7 657 aa14.65□□□□□ -0.06
ACTN1-206ENST00000544964 KIAA0355O15063 1070 aa14.65□□□□□ -0.06
ACTN1-206ENST00000544964 NMT2O60551 498 aa14.65□□□□□ -0.06
ACTN1-206ENST00000544964 PQBP1O60828 265 aaKnown RBP14.65□□□□□ -0.06
ACTN1-206ENST00000544964 DUSP11O75319 330 aaKnown RBP14.65□□□□□ -0.06
ACTN1-206ENST00000544964 CST5P28325 142 aaPredicted RBP14.65□□□□□ -0.06
ACTN1-206ENST00000544964 STAT2P52630 851 aa14.65□□□□□ -0.06
ACTN1-206ENST00000544964 EPHB4P54760 987 aa14.65□□□□□ -0.06
ACTN1-206ENST00000544964 ACVR2BQ13705 512 aa14.65□□□□□ -0.06
ACTN1-206ENST00000544964 ARMCX2Q7L311 632 aa14.65□□□□□ -0.06
ACTN1-206ENST00000544964 ANKRD33Q7Z3H0 272 aa14.65□□□□□ -0.06
ACTN1-206ENST00000544964 TSEN34Q9BSV6 310 aaKnown RBP14.65□□□□□ -0.06
ACTN1-206ENST00000544964 UPF3AQ9H1J1 476 aaKnown RBP14.65□□□□□ -0.06
ACTN1-206ENST00000544964 TOMM22Q9NS69 142 aa14.65□□□□□ -0.06
ACTN1-206ENST00000544964 HOMER2Q9NSB8 354 aa14.65□□□□□ -0.06
ACTN1-206ENST00000544964 FBXO40Q9UH90 709 aa14.65□□□□□ -0.06
ACTN1-206ENST00000544964 FAM184BQ9ULE4 1060 aa14.65□□□□□ -0.06
ACTN1-206ENST00000544964 TTC28Q96AY4 2481 aa14.65□□□□□ -0.06
ACTN1-206ENST00000544964 ASTN1O14525 1302 aa14.65□□□□□ -0.06
ACTN1-206ENST00000544964 MOXD2PA6NHM9 499 aa14.64□□□□□ -0.07
ACTN1-206ENST00000544964 SLC27A2O14975 620 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms