RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 EIF3JO75822 258 aaKnown RBP14.64□□□□□ -0.07
CPSF7-223ENST00000544669 OR52Z1P0C646 297 aa14.64□□□□□ -0.07
CPSF7-223ENST00000544669 RFC4P35249 363 aa14.64□□□□□ -0.07
CPSF7-223ENST00000544669 CYLC1P35663 651 aaPredicted RBP14.64□□□□□ -0.07
CPSF7-223ENST00000544669 PRCPP42785 496 aa14.64□□□□□ -0.07
CPSF7-223ENST00000544669 IL17AQ16552 155 aa14.64□□□□□ -0.07
CPSF7-223ENST00000544669 ZNF569Q5MCW4 686 aa14.64□□□□□ -0.07
CPSF7-223ENST00000544669 TRAPPC3LQ5T215 181 aa14.64□□□□□ -0.07
CPSF7-223ENST00000544669 CC2D1AQ6P1N0 951 aaPredicted RBP14.64□□□□□ -0.07
CPSF7-223ENST00000544669 CNNM4Q6P4Q7 775 aa14.64□□□□□ -0.07
CPSF7-223ENST00000544669 FOXR2Q6PJQ5 311 aa14.64□□□□□ -0.07
CPSF7-223ENST00000544669 TMC4Q7Z404 712 aa14.64□□□□□ -0.07
CPSF7-223ENST00000544669 HEATR3Q7Z4Q2 680 aa14.64□□□□□ -0.07
CPSF7-223ENST00000544669 CCDC170Q8IYT3 715 aa14.64□□□□□ -0.07
CPSF7-223ENST00000544669 NAP1L4Q99733 375 aaKnown RBP14.64□□□□□ -0.07
CPSF7-223ENST00000544669 C7orf25Q9BPX7 421 aa14.64□□□□□ -0.07
CPSF7-223ENST00000544669 LZTFL1Q9NQ48 299 aa14.64□□□□□ -0.07
CPSF7-223ENST00000544669 CAPN11Q9UMQ6 739 aa14.64□□□□□ -0.07
CPSF7-223ENST00000544669 COL24A1Q17RW2 1714 aa14.63□□□□□ -0.07
CPSF7-223ENST00000544669 CCDC88AQ3V6T2 1871 aa14.63□□□□□ -0.07
CPSF7-223ENST00000544669 KLRF2D3W0D1 207 aa14.63□□□□□ -0.07
CPSF7-223ENST00000544669 STXBP3O00186 592 aa14.63□□□□□ -0.07
CPSF7-223ENST00000544669 CYP2D6P10635 497 aa14.63□□□□□ -0.07
CPSF7-223ENST00000544669 KARSQ15046 597 aaKnown RBP14.63□□□□□ -0.07
CPSF7-223ENST00000544669 FIGNQ5HY92 759 aa14.63□□□□□ -0.07
CPSF7-223ENST00000544669 C16orf86Q6ZW13 317 aa14.63□□□□□ -0.07
CPSF7-223ENST00000544669 DNAJC7Q99615 494 aa14.63□□□□□ -0.07
CPSF7-223ENST00000544669 TMEM47Q9BQJ4 181 aa14.63□□□□□ -0.07
CPSF7-223ENST00000544669 DESI2Q9BSY9 194 aa14.63□□□□□ -0.07
CPSF7-223ENST00000544669 VPS16Q9H269 839 aa14.63□□□□□ -0.07
CPSF7-223ENST00000544669 MRPL44Q9H9J2 332 aaKnown RBP14.63□□□□□ -0.07
CPSF7-223ENST00000544669 STK17AQ9UEE5 414 aa14.63□□□□□ -0.07
CPSF7-223ENST00000544669 CCNL1Q9UK58 526 aaPredicted RBP14.63□□□□□ -0.07
CPSF7-223ENST00000544669 EPN1Q9Y6I3 576 aaPredicted RBP14.63□□□□□ -0.07
CPSF7-223ENST00000544669 GPR75-ASB3A0A0A6YYF3 556 aa14.62□□□□□ -0.07
CPSF7-223ENST00000544669 CTAGE15A4D2H0 777 aa14.62□□□□□ -0.07
CPSF7-223ENST00000544669 SLC26A4O43511 780 aa14.62□□□□□ -0.07
CPSF7-223ENST00000544669 TOM1O60784 492 aa14.62□□□□□ -0.07
CPSF7-223ENST00000544669 CTAGE8P0CG41 777 aa14.62□□□□□ -0.07
CPSF7-223ENST00000544669 CCNE1P24864 410 aa14.62□□□□□ -0.07
CPSF7-223ENST00000544669 CCT6AP40227 531 aaKnown RBP14.62□□□□□ -0.07
CPSF7-223ENST00000544669 FXR1P51114 621 aaKnown RBP eCLIP14.62□□□□□ -0.07
CPSF7-223ENST00000544669 NAPAP54920 295 aa14.62□□□□□ -0.07
CPSF7-223ENST00000544669 CDK17Q00537 523 aa14.62□□□□□ -0.07
CPSF7-223ENST00000544669 TMEM266Q2M3C6 531 aa14.62□□□□□ -0.07
CPSF7-223ENST00000544669 ARHGAP27Q6ZUM4 889 aa14.62□□□□□ -0.07
CPSF7-223ENST00000544669 NEK8Q86SG6 692 aa14.62□□□□□ -0.07
CPSF7-223ENST00000544669 CTAGE6Q86UF2 777 aa14.62□□□□□ -0.07
CPSF7-223ENST00000544669 CABP7Q86V35 215 aa14.62□□□□□ -0.07
CPSF7-223ENST00000544669 CTAGE4Q8IX94 777 aa14.62□□□□□ -0.07
CPSF7-223ENST00000544669 SMYD4Q8IYR2 804 aaPredicted RBP14.62□□□□□ -0.07
CPSF7-223ENST00000544669 TRIM47Q96LD4 638 aa14.62□□□□□ -0.07
CPSF7-223ENST00000544669 EXOC1Q9NV70 894 aa14.62□□□□□ -0.07
CPSF7-223ENST00000544669 STX8Q9UNK0 236 aa14.62□□□□□ -0.07
CPSF7-223ENST00000544669 SUGT1Q9Y2Z0 365 aa14.62□□□□□ -0.07
CPSF7-223ENST00000544669 MYH2Q9UKX2 1941 aa14.62□□□□□ -0.07
CPSF7-223ENST00000544669 ABCB11O95342 1321 aa14.62□□□□□ -0.07
CPSF7-223ENST00000544669 NUTM2BA6NNL0 878 aaPredicted RBP14.62□□□□□ -0.07
CPSF7-223ENST00000544669 NUTM2EB1AL46 878 aaPredicted RBP14.62□□□□□ -0.07
CPSF7-223ENST00000544669 KRT86O43790 486 aa14.62□□□□□ -0.07
CPSF7-223ENST00000544669 BBOX1O75936 387 aa14.62□□□□□ -0.07
CPSF7-223ENST00000544669 KLRK1P26718 216 aa14.62□□□□□ -0.07
CPSF7-223ENST00000544669 FKBP15Q5T1M5 1219 aa14.62□□□□□ -0.07
CPSF7-223ENST00000544669 IQCEQ6IPM2 695 aa14.62□□□□□ -0.07
CPSF7-223ENST00000544669 CNBD1Q8NA66 436 aa14.62□□□□□ -0.07
CPSF7-223ENST00000544669 MSANTD4Q8NCY6 345 aa14.62□□□□□ -0.07
CPSF7-223ENST00000544669 SH3RF3Q8TEJ3 882 aaPredicted RBP14.62□□□□□ -0.07
CPSF7-223ENST00000544669 RPGRQ92834 1020 aaKnown RBP14.62□□□□□ -0.07
CPSF7-223ENST00000544669 EYA3Q99504 573 aa14.62□□□□□ -0.07
CPSF7-223ENST00000544669 MTRQ99707 1265 aa14.62□□□□□ -0.07
CPSF7-223ENST00000544669 PARD6BQ9BYG5 372 aa14.62□□□□□ -0.07
CPSF7-223ENST00000544669 TSGA10Q9BZW7 698 aa14.62□□□□□ -0.07
CPSF7-223ENST00000544669 TAB2Q9NYJ8 693 aa14.62□□□□□ -0.07
CPSF7-223ENST00000544669 PVALEFA0A1B0GWK0 134 aa14.61□□□□□ -0.07
CPSF7-223ENST00000544669 A0A1W2PQJ5 194 aa14.61□□□□□ -0.07
CPSF7-223ENST00000544669 SMIM22K7EJ46 135 aa14.61□□□□□ -0.07
CPSF7-223ENST00000544669 WNT7AO00755 349 aa14.61□□□□□ -0.07
CPSF7-223ENST00000544669 NDUFA10O95299 355 aa14.61□□□□□ -0.07
CPSF7-223ENST00000544669 SRGNP10124 158 aa14.61□□□□□ -0.07
CPSF7-223ENST00000544669 IL1R1P14778 569 aa14.61□□□□□ -0.07
CPSF7-223ENST00000544669 RASA1P20936 1047 aa14.61□□□□□ -0.07
CPSF7-223ENST00000544669 CKAP4Q07065 602 aaKnown RBP14.61□□□□□ -0.07
CPSF7-223ENST00000544669 PDIA5Q14554 519 aa14.61□□□□□ -0.07
CPSF7-223ENST00000544669 SEPT2Q15019 361 aa14.61□□□□□ -0.07
CPSF7-223ENST00000544669 FAM98CQ17RN3 349 aaKnown RBP14.61□□□□□ -0.07
CPSF7-223ENST00000544669 INF2Q27J81 1249 aa14.61□□□□□ -0.07
CPSF7-223ENST00000544669 PPP1R18Q6NYC8 613 aa14.61□□□□□ -0.07
CPSF7-223ENST00000544669 HDXQ7Z353 690 aa14.61□□□□□ -0.07
CPSF7-223ENST00000544669 TGFBRAP1Q8WUH2 860 aa14.61□□□□□ -0.07
CPSF7-223ENST00000544669 ARHGEF1Q92888 912 aaKnown RBP14.61□□□□□ -0.07
CPSF7-223ENST00000544669 P2RX5Q93086 422 aa14.61□□□□□ -0.07
CPSF7-223ENST00000544669 RBM17Q96I25 401 aaKnown RBP14.61□□□□□ -0.07
CPSF7-223ENST00000544669 GLT8D2Q9H1C3 349 aa14.61□□□□□ -0.07
CPSF7-223ENST00000544669 RAB21Q9UL25 225 aa14.61□□□□□ -0.07
CPSF7-223ENST00000544669 SMCO2A6NFE2 343 aa14.6□□□□□ -0.07
CPSF7-223ENST00000544669 CASP1P29466 404 aa14.6□□□□□ -0.07
CPSF7-223ENST00000544669 NOVP48745 357 aa14.6□□□□□ -0.07
CPSF7-223ENST00000544669 PSMD2Q13200 908 aa14.6□□□□□ -0.07
CPSF7-223ENST00000544669 ASPRV1Q53RT3 343 aa14.6□□□□□ -0.07
CPSF7-223ENST00000544669 CCDC84Q86UT8 332 aaPredicted RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms