RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 SYNRGQ9UMZ2 1314 aa15.49■□□□□ 0.07
RTN3-213ENST00000543552 A0A0D9SFI3 127 aa15.49■□□□□ 0.07
RTN3-213ENST00000543552 A0A1W2PQ45 241 aaPredicted RBP15.49■□□□□ 0.07
RTN3-213ENST00000543552 A0A1W2PQY0 241 aa15.49■□□□□ 0.07
RTN3-213ENST00000543552 MOXD2PA6NHM9 499 aa15.49■□□□□ 0.07
RTN3-213ENST00000543552 POTEB2H3BUK9 544 aa15.49■□□□□ 0.07
RTN3-213ENST00000543552 DUSP11O75319 330 aaKnown RBP15.49■□□□□ 0.07
RTN3-213ENST00000543552 SNAI1O95863 264 aaPredicted RBP15.49■□□□□ 0.07
RTN3-213ENST00000543552 FGAP02671 866 aa15.49■□□□□ 0.07
RTN3-213ENST00000543552 FGRP09769 529 aa15.49■□□□□ 0.07
RTN3-213ENST00000543552 NT5C2P49902 561 aa15.49■□□□□ 0.07
RTN3-213ENST00000543552 ACVR2BQ13705 512 aa15.49■□□□□ 0.07
RTN3-213ENST00000543552 CCDC96Q2M329 555 aa15.49■□□□□ 0.07
RTN3-213ENST00000543552 RILPL2Q969X0 211 aa15.49■□□□□ 0.07
RTN3-213ENST00000543552 FAM227BQ96M60 508 aa15.49■□□□□ 0.07
RTN3-213ENST00000543552 RNF41Q9H4P4 317 aaPredicted RBP15.49■□□□□ 0.07
RTN3-213ENST00000543552 IL17RBQ9NRM6 502 aa15.49■□□□□ 0.07
RTN3-213ENST00000543552 RNF146Q9NTX7 359 aa15.49■□□□□ 0.07
RTN3-213ENST00000543552 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.49■□□□□ 0.07
RTN3-213ENST00000543552 ADAMTS4O75173 837 aa15.48■□□□□ 0.07
RTN3-213ENST00000543552 HSPD1P10809 573 aaKnown RBP15.48■□□□□ 0.07
RTN3-213ENST00000543552 TOP1P11387 765 aaKnown RBP15.48■□□□□ 0.07
RTN3-213ENST00000543552 NOVP48745 357 aa15.48■□□□□ 0.07
RTN3-213ENST00000543552 NMIQ13287 307 aaPredicted RBP15.48■□□□□ 0.07
RTN3-213ENST00000543552 RRP12Q5JTH9 1297 aaKnown RBP15.48■□□□□ 0.07
RTN3-213ENST00000543552 KCTD1Q719H9 257 aa15.48■□□□□ 0.07
RTN3-213ENST00000543552 CHD1LQ86WJ1 897 aa15.48■□□□□ 0.07
RTN3-213ENST00000543552 DEFB123Q8N688 67 aa15.48■□□□□ 0.07
RTN3-213ENST00000543552 PCSK9Q8NBP7 692 aaKnown RBP15.48■□□□□ 0.07
RTN3-213ENST00000543552 PDLIM7Q9NR12 457 aa15.48■□□□□ 0.07
RTN3-213ENST00000543552 PNMA2Q9UL42 364 aa15.48■□□□□ 0.07
RTN3-213ENST00000543552 TACC3Q9Y6A5 838 aa15.48■□□□□ 0.07
RTN3-213ENST00000543552 SMCHD1A6NHR9 2005 aa15.48■□□□□ 0.07
RTN3-213ENST00000543552 LTBP2Q14767 1821 aa15.47■□□□□ 0.07
RTN3-213ENST00000543552 MROH7Q68CQ1 1323 aa15.47■□□□□ 0.07
RTN3-213ENST00000543552 COL6A3P12111 3177 aa15.47■□□□□ 0.07
RTN3-213ENST00000543552 ASB14A6NK59 587 aa15.47■□□□□ 0.07
RTN3-213ENST00000543552 HIP1O00291 1037 aa15.47■□□□□ 0.07
RTN3-213ENST00000543552 NMT2O60551 498 aa15.47■□□□□ 0.07
RTN3-213ENST00000543552 CLTBP09497 229 aa15.47■□□□□ 0.07
RTN3-213ENST00000543552 ALAS1P13196 640 aa15.47■□□□□ 0.07
RTN3-213ENST00000543552 ACLYP53396 1101 aa15.47■□□□□ 0.07
RTN3-213ENST00000543552 TLE2Q04725 743 aa15.47■□□□□ 0.07
RTN3-213ENST00000543552 B4GALNT3Q6L9W6 998 aa15.47■□□□□ 0.07
RTN3-213ENST00000543552 MFSD6Q6ZSS7 791 aa15.47■□□□□ 0.07
RTN3-213ENST00000543552 ARMCX2Q7L311 632 aa15.47■□□□□ 0.07
RTN3-213ENST00000543552 LENG1Q96BZ8 264 aaPredicted RBP15.47■□□□□ 0.07
RTN3-213ENST00000543552 AGBL1Q96MI9 1066 aa15.47■□□□□ 0.07
RTN3-213ENST00000543552 TRERF1Q96PN7 1200 aa15.47■□□□□ 0.07
RTN3-213ENST00000543552 OSBPL3Q9H4L5 887 aa15.47■□□□□ 0.07
RTN3-213ENST00000543552 A1CFQ9NQ94 594 aaKnown RBP15.47■□□□□ 0.07
RTN3-213ENST00000543552 STARD7Q9NQZ5 370 aa15.47■□□□□ 0.07
RTN3-213ENST00000543552 TCP11L1Q9NUJ3 509 aa15.47■□□□□ 0.07
RTN3-213ENST00000543552 CCPG1Q9ULG6 757 aa15.47■□□□□ 0.07
RTN3-213ENST00000543552 PRR12Q9ULL5 1215 aa15.47■□□□□ 0.07
RTN3-213ENST00000543552 ZNF536O15090 1300 aa15.46■□□□□ 0.07
RTN3-213ENST00000543552 DCDC2CA8MYV0 355 aa15.46■□□□□ 0.07
RTN3-213ENST00000543552 ICAM1P05362 532 aa15.46■□□□□ 0.07
RTN3-213ENST00000543552 C6orf222P0C671 652 aaPredicted RBP15.46■□□□□ 0.07
RTN3-213ENST00000543552 CST5P28325 142 aaPredicted RBP15.46■□□□□ 0.07
RTN3-213ENST00000543552 NUCB1Q02818 461 aa15.46■□□□□ 0.07
RTN3-213ENST00000543552 CCDC144BQ3MJ40 725 aa15.46■□□□□ 0.07
RTN3-213ENST00000543552 AKNAD1Q5T1N1 836 aa15.46■□□□□ 0.07
RTN3-213ENST00000543552 CCDC174Q6PII3 467 aa15.46■□□□□ 0.07
RTN3-213ENST00000543552 ZNF589Q86UQ0 364 aaPredicted RBP15.46■□□□□ 0.07
RTN3-213ENST00000543552 CCDC144CPQ8IYA2 1237 aa15.46■□□□□ 0.07
RTN3-213ENST00000543552 FAM133AQ8N9E0 248 aa15.46■□□□□ 0.07
RTN3-213ENST00000543552 GLT1D1Q96MS3 346 aa15.46■□□□□ 0.07
RTN3-213ENST00000543552 INCENPQ9NQS7 918 aa15.46■□□□□ 0.07
RTN3-213ENST00000543552 DIAPH3Q9NSV4 1193 aa15.46■□□□□ 0.07
RTN3-213ENST00000543552 MTMR7Q9Y216 660 aa15.46■□□□□ 0.07
RTN3-213ENST00000543552 ELP1O95163 1332 aa15.45■□□□□ 0.06
RTN3-213ENST00000543552 PQBP1O60828 265 aaKnown RBP15.45■□□□□ 0.06
RTN3-213ENST00000543552 SDSP20132 328 aa15.45■□□□□ 0.06
RTN3-213ENST00000543552 KCNA10Q16322 511 aa15.45■□□□□ 0.06
RTN3-213ENST00000543552 KLHDC9Q8NEP7 349 aa15.45■□□□□ 0.06
RTN3-213ENST00000543552 ESR2Q92731 530 aa15.45■□□□□ 0.06
RTN3-213ENST00000543552 CHMP4CQ96CF2 233 aa15.45■□□□□ 0.06
RTN3-213ENST00000543552 FGD4Q96M96 766 aa15.45■□□□□ 0.06
RTN3-213ENST00000543552 TTC14Q96N46 770 aa15.45■□□□□ 0.06
RTN3-213ENST00000543552 TOX2Q96NM4 488 aa15.45■□□□□ 0.06
RTN3-213ENST00000543552 UPF3AQ9H1J1 476 aaKnown RBP15.45■□□□□ 0.06
RTN3-213ENST00000543552 ZNF213O14771 459 aa15.44■□□□□ 0.06
RTN3-213ENST00000543552 RAG1P15918 1043 aa15.44■□□□□ 0.06
RTN3-213ENST00000543552 GJA9P57773 515 aa15.44■□□□□ 0.06
RTN3-213ENST00000543552 HAND2P61296 217 aa15.44■□□□□ 0.06
RTN3-213ENST00000543552 CNTN2Q02246 1040 aa15.44■□□□□ 0.06
RTN3-213ENST00000543552 CCDC178Q5BJE1 867 aa15.44■□□□□ 0.06
RTN3-213ENST00000543552 SYDE2Q5VT97 1194 aa15.44■□□□□ 0.06
RTN3-213ENST00000543552 BTNL9Q6UXG8 535 aa15.44■□□□□ 0.06
RTN3-213ENST00000543552 NOL8Q76FK4 1167 aaKnown RBP15.44■□□□□ 0.06
RTN3-213ENST00000543552 ANKRD33Q7Z3H0 272 aa15.44■□□□□ 0.06
RTN3-213ENST00000543552 PLEKHM2Q8IWE5 1019 aa15.44■□□□□ 0.06
RTN3-213ENST00000543552 BADQ92934 168 aa15.44■□□□□ 0.06
RTN3-213ENST00000543552 TMEM47Q9BQJ4 181 aa15.44■□□□□ 0.06
RTN3-213ENST00000543552 RANBP17Q9H2T7 1088 aaKnown RBP15.44■□□□□ 0.06
RTN3-213ENST00000543552 CYP39A1Q9NYL5 469 aa15.44■□□□□ 0.06
RTN3-213ENST00000543552 ADD3Q9UEY8 706 aaKnown RBP15.44■□□□□ 0.06
RTN3-213ENST00000543552 LOC102724159A0A0B4J2E5 919 aa15.43■□□□□ 0.06
RTN3-213ENST00000543552 KIAA0355O15063 1070 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms