RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 GJC2Q5T442 439 aaPredicted RBP15.46■□□□□ 0.07
TNFRSF1A-215ENST00000543359 ZNF467Q7Z7K2 595 aaPredicted RBP15.46■□□□□ 0.07
TNFRSF1A-215ENST00000543359 C7orf61Q8IZ16 206 aa15.46■□□□□ 0.07
TNFRSF1A-215ENST00000543359 ANKS1AQ92625 1134 aa15.46■□□□□ 0.07
TNFRSF1A-215ENST00000543359 RNF41Q9H4P4 317 aaPredicted RBP15.46■□□□□ 0.07
TNFRSF1A-215ENST00000543359 FBXO40Q9UH90 709 aa15.46■□□□□ 0.07
TNFRSF1A-215ENST00000543359 MCM3APO60318 1980 aa15.45■□□□□ 0.06
TNFRSF1A-215ENST00000543359 PDHBP11177 359 aa15.45■□□□□ 0.06
TNFRSF1A-215ENST00000543359 ANKRD35Q8N283 1001 aa15.45■□□□□ 0.06
TNFRSF1A-215ENST00000543359 FAM133AQ8N9E0 248 aa15.45■□□□□ 0.06
TNFRSF1A-215ENST00000543359 ARRDC4Q8NCT1 418 aa15.45■□□□□ 0.06
TNFRSF1A-215ENST00000543359 ESR2Q92731 530 aa15.45■□□□□ 0.06
TNFRSF1A-215ENST00000543359 DDX11Q96FC9 970 aa15.45■□□□□ 0.06
TNFRSF1A-215ENST00000543359 GDF15Q99988 308 aa15.45■□□□□ 0.06
TNFRSF1A-215ENST00000543359 SENP6Q9GZR1 1112 aaPredicted RBP15.45■□□□□ 0.06
TNFRSF1A-215ENST00000543359 RANBP17Q9H2T7 1088 aaKnown RBP15.45■□□□□ 0.06
TNFRSF1A-215ENST00000543359 CTDP1Q9Y5B0 961 aaPredicted RBP15.45■□□□□ 0.06
TNFRSF1A-215ENST00000543359 CHMLP26374 656 aa15.44■□□□□ 0.06
TNFRSF1A-215ENST00000543359 SLC16A2P36021 539 aa15.44■□□□□ 0.06
TNFRSF1A-215ENST00000543359 NT5C2P49902 561 aa15.44■□□□□ 0.06
TNFRSF1A-215ENST00000543359 CNTN2Q02246 1040 aa15.44■□□□□ 0.06
TNFRSF1A-215ENST00000543359 LRRC41Q15345 812 aa15.44■□□□□ 0.06
TNFRSF1A-215ENST00000543359 TKFCQ3LXA3 575 aa15.44■□□□□ 0.06
TNFRSF1A-215ENST00000543359 DGKHQ86XP1 1220 aa15.44■□□□□ 0.06
TNFRSF1A-215ENST00000543359 TRERF1Q96PN7 1200 aa15.44■□□□□ 0.06
TNFRSF1A-215ENST00000543359 ZKSCAN3Q9BRR0 538 aa15.44■□□□□ 0.06
TNFRSF1A-215ENST00000543359 KATNBL1Q9H079 304 aa15.44■□□□□ 0.06
TNFRSF1A-215ENST00000543359 ACAD9Q9H845 621 aa15.44■□□□□ 0.06
TNFRSF1A-215ENST00000543359 A1CFQ9NQ94 594 aaKnown RBP15.44■□□□□ 0.06
TNFRSF1A-215ENST00000543359 HOMER2Q9NSB8 354 aa15.44■□□□□ 0.06
TNFRSF1A-215ENST00000543359 RNF146Q9NTX7 359 aa15.44■□□□□ 0.06
TNFRSF1A-215ENST00000543359 PCDH10Q9P2E7 1040 aa15.44■□□□□ 0.06
TNFRSF1A-215ENST00000543359 ZMYND8Q9ULU4 1186 aaPredicted RBP15.44■□□□□ 0.06
TNFRSF1A-215ENST00000543359 MTMR7Q9Y216 660 aa15.44■□□□□ 0.06
TNFRSF1A-215ENST00000543359 ASTN1O14525 1302 aa15.43■□□□□ 0.06
TNFRSF1A-215ENST00000543359 SOWAHBA6NEL2 793 aa15.43■□□□□ 0.06
TNFRSF1A-215ENST00000543359 KDM4AO75164 1064 aa15.43■□□□□ 0.06
TNFRSF1A-215ENST00000543359 ICAM1P05362 532 aa15.43■□□□□ 0.06
TNFRSF1A-215ENST00000543359 ZNF543Q08ER8 600 aa15.43■□□□□ 0.06
TNFRSF1A-215ENST00000543359 IKQ13123 557 aaPredicted RBP15.43■□□□□ 0.06
TNFRSF1A-215ENST00000543359 CCDC96Q2M329 555 aa15.43■□□□□ 0.06
TNFRSF1A-215ENST00000543359 MUM1L1Q5H9M0 696 aa15.43■□□□□ 0.06
TNFRSF1A-215ENST00000543359 SYDE2Q5VT97 1194 aa15.43■□□□□ 0.06
TNFRSF1A-215ENST00000543359 CCDC174Q6PII3 467 aa15.43■□□□□ 0.06
TNFRSF1A-215ENST00000543359 GPCPD1Q9NPB8 672 aa15.43■□□□□ 0.06
TNFRSF1A-215ENST00000543359 ZSWIM5Q9P217 1185 aa15.43■□□□□ 0.06
TNFRSF1A-215ENST00000543359 CTNNA3Q9UI47 895 aa15.43■□□□□ 0.06
TNFRSF1A-215ENST00000543359 ISY1Q9ULR0 285 aaKnown RBP15.43■□□□□ 0.06
TNFRSF1A-215ENST00000543359 LCTP09848 1927 aa15.43■□□□□ 0.06
TNFRSF1A-215ENST00000543359 FRMPD2Q68DX3 1309 aaPredicted RBP15.43■□□□□ 0.06
TNFRSF1A-215ENST00000543359 B4E1Z4 1266 aa15.42■□□□□ 0.06
TNFRSF1A-215ENST00000543359 ADCY6O43306 1168 aa15.42■□□□□ 0.06
TNFRSF1A-215ENST00000543359 ADAMTS4O75173 837 aa15.42■□□□□ 0.06
TNFRSF1A-215ENST00000543359 ALAS1P13196 640 aa15.42■□□□□ 0.06
TNFRSF1A-215ENST00000543359 SYN1P17600 705 aa15.42■□□□□ 0.06
TNFRSF1A-215ENST00000543359 BMP8BP34820 402 aa15.42■□□□□ 0.06
TNFRSF1A-215ENST00000543359 PTH1RQ03431 593 aa15.42■□□□□ 0.06
TNFRSF1A-215ENST00000543359 SNX17Q15036 470 aa15.42■□□□□ 0.06
TNFRSF1A-215ENST00000543359 IMMTQ16891 758 aaKnown RBP15.42■□□□□ 0.06
TNFRSF1A-215ENST00000543359 LENG1Q96BZ8 264 aaPredicted RBP15.42■□□□□ 0.06
TNFRSF1A-215ENST00000543359 XPNPEP3Q9NQH7 507 aa15.42■□□□□ 0.06
TNFRSF1A-215ENST00000543359 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.42■□□□□ 0.06
TNFRSF1A-215ENST00000543359 CNPY2Q9Y2B0 182 aa15.42■□□□□ 0.06
TNFRSF1A-215ENST00000543359 RAD50Q92878 1312 aa15.42■□□□□ 0.06
TNFRSF1A-215ENST00000543359 POTEB2H3BUK9 544 aa15.41■□□□□ 0.06
TNFRSF1A-215ENST00000543359 PGK1P00558 417 aa15.41■□□□□ 0.06
TNFRSF1A-215ENST00000543359 RARBP10826 455 aa15.41■□□□□ 0.06
TNFRSF1A-215ENST00000543359 AKR1A1P14550 325 aa15.41■□□□□ 0.06
TNFRSF1A-215ENST00000543359 ADCYAP1R1P41586 468 aa15.41■□□□□ 0.06
TNFRSF1A-215ENST00000543359 ATN1P54259 1190 aaPredicted RBP15.41■□□□□ 0.06
TNFRSF1A-215ENST00000543359 ACVR2BQ13705 512 aa15.41■□□□□ 0.06
TNFRSF1A-215ENST00000543359 SLC39A5Q6ZMH5 540 aa15.41■□□□□ 0.06
TNFRSF1A-215ENST00000543359 ARMCX2Q7L311 632 aa15.41■□□□□ 0.06
TNFRSF1A-215ENST00000543359 CCDC144CPQ8IYA2 1237 aa15.41■□□□□ 0.06
TNFRSF1A-215ENST00000543359 ENAHQ8N8S7 591 aaPredicted RBP15.41■□□□□ 0.06
TNFRSF1A-215ENST00000543359 KLHDC9Q8NEP7 349 aa15.41■□□□□ 0.06
TNFRSF1A-215ENST00000543359 ZSCAN10Q96SZ4 725 aaPredicted RBP15.41■□□□□ 0.06
TNFRSF1A-215ENST00000543359 ABHD16BQ9H3Z7 469 aa15.41■□□□□ 0.06
TNFRSF1A-215ENST00000543359 CYP39A1Q9NYL5 469 aa15.41■□□□□ 0.06
TNFRSF1A-215ENST00000543359 CCPG1Q9ULG6 757 aa15.41■□□□□ 0.06
TNFRSF1A-215ENST00000543359 PHF24Q9UPV7 400 aa15.41■□□□□ 0.06
TNFRSF1A-215ENST00000543359 TAF6LQ9Y6J9 622 aa15.41■□□□□ 0.06
TNFRSF1A-215ENST00000543359 A0A1W2PPC1 479 aa15.4■□□□□ 0.06
TNFRSF1A-215ENST00000543359 SGSM2O43147 1006 aa15.4■□□□□ 0.06
TNFRSF1A-215ENST00000543359 MAGEA10P43363 369 aaPredicted RBP15.4■□□□□ 0.06
TNFRSF1A-215ENST00000543359 CCSAPQ6IQ19 270 aaPredicted RBP15.4■□□□□ 0.06
TNFRSF1A-215ENST00000543359 PURBQ96QR8 312 aaKnown RBP15.4■□□□□ 0.06
TNFRSF1A-215ENST00000543359 CPVLQ9H3G5 476 aa15.4■□□□□ 0.06
TNFRSF1A-215ENST00000543359 DDX49Q9Y6V7 483 aaKnown RBP15.4■□□□□ 0.06
TNFRSF1A-215ENST00000543359 KBTBD13C9JR72 458 aa15.39■□□□□ 0.05
TNFRSF1A-215ENST00000543359 DUSP11O75319 330 aaKnown RBP15.39■□□□□ 0.05
TNFRSF1A-215ENST00000543359 CYP21A2P08686 494 aa15.39■□□□□ 0.05
TNFRSF1A-215ENST00000543359 RTP1P59025 263 aa15.39■□□□□ 0.05
TNFRSF1A-215ENST00000543359 SEC23AQ15436 765 aa15.39■□□□□ 0.05
TNFRSF1A-215ENST00000543359 CCDC144BQ3MJ40 725 aa15.39■□□□□ 0.05
TNFRSF1A-215ENST00000543359 CCDC178Q5BJE1 867 aa15.39■□□□□ 0.05
TNFRSF1A-215ENST00000543359 C1orf53Q5VUE5 145 aa15.39■□□□□ 0.05
TNFRSF1A-215ENST00000543359 IQCA1Q86XH1 822 aa15.39■□□□□ 0.05
TNFRSF1A-215ENST00000543359 PNMA1Q8ND90 353 aa15.39■□□□□ 0.05
TNFRSF1A-215ENST00000543359 MORC4Q8TE76 937 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms