RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 SLC7A14Q8TBB6 771 aa5.12□□□□□ -1.59
SFSWAP-211ENST00000542813 SMARCC1Q92922 1105 aaPredicted RBP5.12□□□□□ -1.59
SFSWAP-211ENST00000542813 OSBP2Q969R2 916 aa5.12□□□□□ -1.59
SFSWAP-211ENST00000542813 CHMP4CQ96CF2 233 aa5.12□□□□□ -1.59
SFSWAP-211ENST00000542813 HOOK2Q96ED9 719 aa5.12□□□□□ -1.59
SFSWAP-211ENST00000542813 WDR89Q96FK6 387 aaPredicted RBP5.12□□□□□ -1.59
SFSWAP-211ENST00000542813 KLHDC7BQ96G42 594 aa5.12□□□□□ -1.59
SFSWAP-211ENST00000542813 FAM83CQ9BQN1 747 aa5.12□□□□□ -1.59
SFSWAP-211ENST00000542813 LGR4Q9BXB1 951 aa5.12□□□□□ -1.59
SFSWAP-211ENST00000542813 RTFDC1Q9BY42 306 aaPredicted RBP5.12□□□□□ -1.59
SFSWAP-211ENST00000542813 WNT10AQ9GZT5 417 aa5.12□□□□□ -1.59
SFSWAP-211ENST00000542813 PUS7LQ9H0K6 701 aaKnown RBP5.12□□□□□ -1.59
SFSWAP-211ENST00000542813 CCDC8Q9H0W5 538 aaPredicted RBP5.12□□□□□ -1.59
SFSWAP-211ENST00000542813 OSGEPQ9NPF4 335 aa5.12□□□□□ -1.59
SFSWAP-211ENST00000542813 APEX2Q9UBZ4 518 aa5.12□□□□□ -1.59
SFSWAP-211ENST00000542813 HIF3AQ9Y2N7 669 aa5.12□□□□□ -1.59
SFSWAP-211ENST00000542813 TNPO3Q9Y5L0 923 aaKnown RBP5.12□□□□□ -1.59
SFSWAP-211ENST00000542813 C9IYK1 514 aa5.11□□□□□ -1.59
SFSWAP-211ENST00000542813 RGS13O14921 159 aa5.11□□□□□ -1.59
SFSWAP-211ENST00000542813 CBFA2T2O43439 604 aa5.11□□□□□ -1.59
SFSWAP-211ENST00000542813 KPNA6O60684 536 aa5.11□□□□□ -1.59
SFSWAP-211ENST00000542813 EFCAB14O75071 495 aa5.11□□□□□ -1.59
SFSWAP-211ENST00000542813 CTSBP07858 339 aa5.11□□□□□ -1.59
SFSWAP-211ENST00000542813 BMP3P12645 472 aa5.11□□□□□ -1.59
SFSWAP-211ENST00000542813 GRIA2P42262 883 aa5.11□□□□□ -1.59
SFSWAP-211ENST00000542813 ZNF460Q14592 562 aa5.11□□□□□ -1.59
SFSWAP-211ENST00000542813 MLC1Q15049 377 aa5.11□□□□□ -1.59
SFSWAP-211ENST00000542813 SEPT7Q16181 437 aaKnown RBP5.11□□□□□ -1.59
SFSWAP-211ENST00000542813 ZC3H12AQ5D1E8 599 aaKnown RBP5.11□□□□□ -1.59
SFSWAP-211ENST00000542813 BEND4Q6ZU67 534 aa5.11□□□□□ -1.59
SFSWAP-211ENST00000542813 ADAT2Q7Z6V5 191 aaKnown RBP5.11□□□□□ -1.59
SFSWAP-211ENST00000542813 MCATQ8IVS2 390 aaKnown RBP5.11□□□□□ -1.59
SFSWAP-211ENST00000542813 FGD4Q96M96 766 aa5.11□□□□□ -1.59
SFSWAP-211ENST00000542813 TTC1Q99614 292 aa5.11□□□□□ -1.59
SFSWAP-211ENST00000542813 YIPF4Q9BSR8 244 aa5.11□□□□□ -1.59
SFSWAP-211ENST00000542813 KLHL25Q9H0H3 589 aa5.11□□□□□ -1.59
SFSWAP-211ENST00000542813 GBP3Q9H0R5 595 aa5.11□□□□□ -1.59
SFSWAP-211ENST00000542813 RNF208Q9H0X6 261 aa5.11□□□□□ -1.59
SFSWAP-211ENST00000542813 KCNF1Q9H3M0 494 aa5.11□□□□□ -1.59
SFSWAP-211ENST00000542813 SLC52A2Q9HAB3 445 aa5.11□□□□□ -1.59
SFSWAP-211ENST00000542813 PICK1Q9NRD5 415 aa5.11□□□□□ -1.59
SFSWAP-211ENST00000542813 TJP2Q9UDY2 1190 aa5.11□□□□□ -1.59
SFSWAP-211ENST00000542813 GOLGA6CA6NDK9 693 aa5.1□□□□□ -1.59
SFSWAP-211ENST00000542813 GOLGA6BA6NDN3 693 aa5.1□□□□□ -1.59
SFSWAP-211ENST00000542813 NOP56O00567 594 aaKnown RBP5.1□□□□□ -1.59
SFSWAP-211ENST00000542813 ADAMTS4O75173 837 aa5.1□□□□□ -1.59
SFSWAP-211ENST00000542813 CLEC3AO75596 197 aa5.1□□□□□ -1.59
SFSWAP-211ENST00000542813 UBOX5O94941 541 aa5.1□□□□□ -1.59
SFSWAP-211ENST00000542813 WNT11O96014 354 aa5.1□□□□□ -1.59
SFSWAP-211ENST00000542813 LDHAP00338 332 aaKnown RBP5.1□□□□□ -1.59
SFSWAP-211ENST00000542813 ASLP04424 464 aa5.1□□□□□ -1.59
SFSWAP-211ENST00000542813 C6orf222P0C671 652 aaPredicted RBP5.1□□□□□ -1.59
SFSWAP-211ENST00000542813 GOLGA6DP0CG33 693 aa5.1□□□□□ -1.59
SFSWAP-211ENST00000542813 YBX3P16989 372 aaKnown RBP eCLIP5.1□□□□□ -1.59
SFSWAP-211ENST00000542813 IGFALSP35858 605 aa5.1□□□□□ -1.59
SFSWAP-211ENST00000542813 FLT3P36888 993 aa5.1□□□□□ -1.59
SFSWAP-211ENST00000542813 PREPP48147 710 aa5.1□□□□□ -1.59
SFSWAP-211ENST00000542813 GABREP78334 506 aa5.1□□□□□ -1.59
SFSWAP-211ENST00000542813 TMPRSS15P98073 1019 aa5.1□□□□□ -1.59
SFSWAP-211ENST00000542813 HP1BP3Q5SSJ5 553 aaPredicted RBP5.1□□□□□ -1.59
SFSWAP-211ENST00000542813 FAM102BQ5T8I3 360 aa5.1□□□□□ -1.59
SFSWAP-211ENST00000542813 NXNQ6DKJ4 435 aa5.1□□□□□ -1.59
SFSWAP-211ENST00000542813 SLC4A10Q6U841 1118 aa5.1□□□□□ -1.59
SFSWAP-211ENST00000542813 FGD2Q7Z6J4 655 aa5.1□□□□□ -1.59
SFSWAP-211ENST00000542813 CCDC144CPQ8IYA2 1237 aa5.1□□□□□ -1.59
SFSWAP-211ENST00000542813 TCEAL8Q8IYN2 117 aa5.1□□□□□ -1.59
SFSWAP-211ENST00000542813 CNTD1Q8N815 330 aa5.1□□□□□ -1.59
SFSWAP-211ENST00000542813 ZNF513Q8N8E2 541 aaPredicted RBP5.1□□□□□ -1.59
SFSWAP-211ENST00000542813 BVESQ8NE79 360 aa5.1□□□□□ -1.59
SFSWAP-211ENST00000542813 GSTCDQ8NEC7 633 aa5.1□□□□□ -1.59
SFSWAP-211ENST00000542813 SHKBP1Q8TBC3 707 aa5.1□□□□□ -1.59
SFSWAP-211ENST00000542813 USP7Q93009 1102 aa5.1□□□□□ -1.59
SFSWAP-211ENST00000542813 SLC39A13Q96H72 371 aa5.1□□□□□ -1.59
SFSWAP-211ENST00000542813 TMEM87BQ96K49 555 aa5.1□□□□□ -1.59
SFSWAP-211ENST00000542813 CCDC74BQ96LY2 380 aa5.1□□□□□ -1.59
SFSWAP-211ENST00000542813 CAMKK2Q96RR4 588 aa5.1□□□□□ -1.59
SFSWAP-211ENST00000542813 TRIM8Q9BZR9 551 aa5.1□□□□□ -1.59
SFSWAP-211ENST00000542813 CHST12Q9NRB3 414 aa5.1□□□□□ -1.59
SFSWAP-211ENST00000542813 GOLGA6AQ9NYA3 693 aa5.1□□□□□ -1.59
SFSWAP-211ENST00000542813 ZNF180Q9UJW8 692 aa5.1□□□□□ -1.59
SFSWAP-211ENST00000542813 TRHDEQ9UKU6 1024 aa5.1□□□□□ -1.59
SFSWAP-211ENST00000542813 NOB1Q9ULX3 412 aaKnown RBP5.1□□□□□ -1.59
SFSWAP-211ENST00000542813 TBX1O43435 398 aa5.09□□□□□ -1.59
SFSWAP-211ENST00000542813 CAPNS1P04632 268 aa5.09□□□□□ -1.59
SFSWAP-211ENST00000542813 SLFN14P0C7P3 912 aa5.09□□□□□ -1.59
SFSWAP-211ENST00000542813 JMJD7P0C870 316 aa5.09□□□□□ -1.59
SFSWAP-211ENST00000542813 GBP1P32455 592 aa5.09□□□□□ -1.59
SFSWAP-211ENST00000542813 NLRP12P59046 1061 aa5.09□□□□□ -1.59
SFSWAP-211ENST00000542813 RING1Q06587 406 aa5.09□□□□□ -1.59
SFSWAP-211ENST00000542813 VPS72Q15906 364 aa5.09□□□□□ -1.59
SFSWAP-211ENST00000542813 LONRF3Q496Y0 759 aa5.09□□□□□ -1.59
SFSWAP-211ENST00000542813 PPM1JQ5JR12 505 aa5.09□□□□□ -1.59
SFSWAP-211ENST00000542813 DCAF15Q66K64 600 aa5.09□□□□□ -1.59
SFSWAP-211ENST00000542813 SLC6A19Q695T7 634 aa5.09□□□□□ -1.59
SFSWAP-211ENST00000542813 FDX2Q6P4F2 183 aa5.09□□□□□ -1.59
SFSWAP-211ENST00000542813 KSR2Q6VAB6 950 aa5.09□□□□□ -1.59
SFSWAP-211ENST00000542813 TICAM2Q86XR7 235 aa5.09□□□□□ -1.59
SFSWAP-211ENST00000542813 HID1Q8IV36 788 aa5.09□□□□□ -1.59
SFSWAP-211ENST00000542813 MRPL41Q8IXM3 137 aaKnown RBP5.09□□□□□ -1.59
SFSWAP-211ENST00000542813 MAGEB6Q8N7X4 407 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms