RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 GPATCH4Q5T3I0 446 aaKnown RBP16.08■□□□□ 0.17
LDB3-207ENST00000542786 DEFB132Q7Z7B7 95 aa16.08■□□□□ 0.17
LDB3-207ENST00000542786 IQUBQ8NA54 791 aa16.08■□□□□ 0.17
LDB3-207ENST00000542786 GSDMAQ96QA5 445 aa16.08■□□□□ 0.17
LDB3-207ENST00000542786 TDRD3Q9H7E2 651 aaKnown RBP16.08■□□□□ 0.17
LDB3-207ENST00000542786 INTS13Q9NVM9 706 aa16.08■□□□□ 0.17
LDB3-207ENST00000542786 IMPACTQ9P2X3 320 aa16.08■□□□□ 0.17
LDB3-207ENST00000542786 ARFGEF1Q9Y6D6 1849 aa16.08■□□□□ 0.16
LDB3-207ENST00000542786 CD44P16070 742 aaKnown RBP16.08■□□□□ 0.16
LDB3-207ENST00000542786 RBM5P52756 815 aaKnown RBP eCLIP16.08■□□□□ 0.16
LDB3-207ENST00000542786 TERF1P54274 439 aa16.08■□□□□ 0.16
LDB3-207ENST00000542786 CCZ1BP86790 482 aa16.08■□□□□ 0.16
LDB3-207ENST00000542786 CCZ1P86791 482 aaPredicted RBP16.08■□□□□ 0.16
LDB3-207ENST00000542786 ORC2Q13416 577 aaPredicted RBP16.08■□□□□ 0.16
LDB3-207ENST00000542786 REXO1Q8N1G1 1221 aaKnown RBP16.08■□□□□ 0.16
LDB3-207ENST00000542786 LRRC15Q8TF66 581 aa16.08■□□□□ 0.16
LDB3-207ENST00000542786 CCSER1Q9C0I3 900 aa16.08■□□□□ 0.16
LDB3-207ENST00000542786 TMEM260Q9NX78 707 aa16.08■□□□□ 0.16
LDB3-207ENST00000542786 MPHOSPH10O00566 681 aaKnown RBP16.07■□□□□ 0.16
LDB3-207ENST00000542786 GTPBP6O43824 516 aaPredicted RBP16.07■□□□□ 0.16
LDB3-207ENST00000542786 NEMFO60524 1076 aa16.07■□□□□ 0.16
LDB3-207ENST00000542786 EEF2P13639 858 aaKnown RBP16.07■□□□□ 0.16
LDB3-207ENST00000542786 DPEP1P16444 411 aa16.07■□□□□ 0.16
LDB3-207ENST00000542786 JAG1P78504 1218 aa16.07■□□□□ 0.16
LDB3-207ENST00000542786 RRP1BQ14684 758 aaKnown RBP16.07■□□□□ 0.16
LDB3-207ENST00000542786 CERKLQ49MI3 558 aaPredicted RBP16.07■□□□□ 0.16
LDB3-207ENST00000542786 SOGA3Q5TF21 947 aa16.07■□□□□ 0.16
LDB3-207ENST00000542786 DTHD1Q6ZMT9 781 aa16.07■□□□□ 0.16
LDB3-207ENST00000542786 NEK8Q86SG6 692 aa16.07■□□□□ 0.16
LDB3-207ENST00000542786 RTKN2Q8IZC4 609 aa16.07■□□□□ 0.16
LDB3-207ENST00000542786 COA7Q96BR5 231 aa16.07■□□□□ 0.16
LDB3-207ENST00000542786 DACH1Q9UI36 760 aa16.07■□□□□ 0.16
LDB3-207ENST00000542786 PP2D1A8MPX8 630 aa16.06■□□□□ 0.16
LDB3-207ENST00000542786 PPP1R3GB7ZBB8 358 aa16.06■□□□□ 0.16
LDB3-207ENST00000542786 VIL1P09327 827 aaKnown RBP16.06■□□□□ 0.16
LDB3-207ENST00000542786 CDC25AP30304 524 aa16.06■□□□□ 0.16
LDB3-207ENST00000542786 BAG6P46379 1132 aa16.06■□□□□ 0.16
LDB3-207ENST00000542786 CLK2P49760 499 aaKnown RBP16.06■□□□□ 0.16
LDB3-207ENST00000542786 RSBN1LQ6PCB5 846 aaPredicted RBP16.06■□□□□ 0.16
LDB3-207ENST00000542786 CCDC34Q96HJ3 373 aa16.06■□□□□ 0.16
LDB3-207ENST00000542786 NAP1L5Q96NT1 182 aaPredicted RBP16.06■□□□□ 0.16
LDB3-207ENST00000542786 KANSL2Q9H9L4 492 aa16.06■□□□□ 0.16
LDB3-207ENST00000542786 RIC8AQ9NPQ8 531 aa16.06■□□□□ 0.16
LDB3-207ENST00000542786 USP17L10C9JJH3 530 aa16.05■□□□□ 0.16
LDB3-207ENST00000542786 OR52Z1P0C646 297 aa16.05■□□□□ 0.16
LDB3-207ENST00000542786 ADCY7P51828 1080 aa16.05■□□□□ 0.16
LDB3-207ENST00000542786 GSDMDP57764 484 aa16.05■□□□□ 0.16
LDB3-207ENST00000542786 SEPT2Q15019 361 aa16.05■□□□□ 0.16
LDB3-207ENST00000542786 KARSQ15046 597 aaKnown RBP16.05■□□□□ 0.16
LDB3-207ENST00000542786 JAKMIP3Q5VZ66 844 aa16.05■□□□□ 0.16
LDB3-207ENST00000542786 KCTD1Q719H9 257 aa16.05■□□□□ 0.16
LDB3-207ENST00000542786 TRMT44Q8IYL2 757 aaKnown RBP16.05■□□□□ 0.16
LDB3-207ENST00000542786 TBCKQ8TEA7 893 aa16.05■□□□□ 0.16
LDB3-207ENST00000542786 SLC16A10Q8TF71 515 aa16.05■□□□□ 0.16
LDB3-207ENST00000542786 DCAF4Q8WV16 495 aa16.05■□□□□ 0.16
LDB3-207ENST00000542786 DISC1Q9NRI5 854 aa16.05■□□□□ 0.16
LDB3-207ENST00000542786 BIN2Q9UBW5 565 aaPredicted RBP16.05■□□□□ 0.16
LDB3-207ENST00000542786 SPDYE2BA6NHP3 402 aa16.05■□□□□ 0.16
LDB3-207ENST00000542786 SPDYE6P0CI01 402 aa16.05■□□□□ 0.16
LDB3-207ENST00000542786 ARMCX5Q6P1M9 558 aa16.05■□□□□ 0.16
LDB3-207ENST00000542786 TMEM179Q6ZVK1 233 aa16.05■□□□□ 0.16
LDB3-207ENST00000542786 FILIP1Q7Z7B0 1213 aa16.05■□□□□ 0.16
LDB3-207ENST00000542786 STAMQ92783 540 aa16.05■□□□□ 0.16
LDB3-207ENST00000542786 NFE2L3Q9Y4A8 694 aa16.05■□□□□ 0.16
LDB3-207ENST00000542786 PSMD14O00487 310 aa16.04■□□□□ 0.16
LDB3-207ENST00000542786 ZBTB5O15062 677 aa16.04■□□□□ 0.16
LDB3-207ENST00000542786 SLC16A2P36021 539 aa16.04■□□□□ 0.16
LDB3-207ENST00000542786 CCDC96Q2M329 555 aa16.04■□□□□ 0.16
LDB3-207ENST00000542786 LETM2Q2VYF4 491 aa16.04■□□□□ 0.16
LDB3-207ENST00000542786 APTXQ7Z2E3 356 aaKnown RBP16.04■□□□□ 0.16
LDB3-207ENST00000542786 TMC6Q7Z403 805 aa16.04■□□□□ 0.16
LDB3-207ENST00000542786 GMCL1P1Q8NEA9 526 aa16.04■□□□□ 0.16
LDB3-207ENST00000542786 AK8Q96MA6 479 aa16.04■□□□□ 0.16
LDB3-207ENST00000542786 MTMR9Q96QG7 549 aa16.04■□□□□ 0.16
LDB3-207ENST00000542786 BLZF1Q9H2G9 400 aa16.04■□□□□ 0.16
LDB3-207ENST00000542786 CNTNAP1P78357 1384 aa16.04■□□□□ 0.16
LDB3-207ENST00000542786 ATP2B2Q01814 1243 aa16.03■□□□□ 0.16
LDB3-207ENST00000542786 VSTM4Q8IW00 320 aa16.03■□□□□ 0.16
LDB3-207ENST00000542786 ZNF277Q9NRM2 450 aaPredicted RBP16.03■□□□□ 0.16
LDB3-207ENST00000542786 KCND1Q9NSA2 647 aa16.03■□□□□ 0.16
LDB3-207ENST00000542786 KBTBD4Q9NVX7 518 aa16.03■□□□□ 0.16
LDB3-207ENST00000542786 ATF5Q9Y2D1 282 aaPredicted RBP16.03■□□□□ 0.16
LDB3-207ENST00000542786 R3HCC1Q9Y3T6 440 aaKnown RBP16.03■□□□□ 0.16
LDB3-207ENST00000542786 TMEM232C9JQI7 657 aa16.03■□□□□ 0.16
LDB3-207ENST00000542786 CBFA2T2O43439 604 aa16.03■□□□□ 0.16
LDB3-207ENST00000542786 CCNT1O60563 726 aaKnown RBP16.03■□□□□ 0.16
LDB3-207ENST00000542786 TXLNAP40222 546 aa16.03■□□□□ 0.16
LDB3-207ENST00000542786 STAT6P42226 847 aa16.03■□□□□ 0.16
LDB3-207ENST00000542786 UBASH3AP57075 661 aa16.03■□□□□ 0.16
LDB3-207ENST00000542786 ICA1Q05084 483 aa16.03■□□□□ 0.16
LDB3-207ENST00000542786 CDKAL1Q5VV42 579 aa16.03■□□□□ 0.16
LDB3-207ENST00000542786 SLFN13Q68D06 897 aa16.03■□□□□ 0.16
LDB3-207ENST00000542786 ZSCAN29Q8IWY8 852 aaPredicted RBP16.03■□□□□ 0.16
LDB3-207ENST00000542786 SMYD4Q8IYR2 804 aaPredicted RBP16.03■□□□□ 0.16
LDB3-207ENST00000542786 IGSF22Q8N9C0 903 aa16.03■□□□□ 0.16
LDB3-207ENST00000542786 MMTAG2Q9BU76 263 aaKnown RBP16.03■□□□□ 0.16
LDB3-207ENST00000542786 VPS33BQ9H267 617 aa16.03■□□□□ 0.16
LDB3-207ENST00000542786 SAMSN1Q9NSI8 373 aaKnown RBP16.03■□□□□ 0.16
LDB3-207ENST00000542786 RAD17O75943 681 aa16.02■□□□□ 0.16
LDB3-207ENST00000542786 ABCB5Q2M3G0 1257 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms