RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 NBPF9Q3BBW0 867 aa11.37□□□□□ -0.59
TOP3A-208ENST00000542570 IGSF22Q8N9C0 903 aa11.37□□□□□ -0.59
TOP3A-208ENST00000542570 KIF18AQ8NI77 898 aa11.37□□□□□ -0.59
TOP3A-208ENST00000542570 NOC4LQ9BVI4 516 aaKnown RBP11.37□□□□□ -0.59
TOP3A-208ENST00000542570 OSBPL5Q9H0X9 879 aaPredicted RBP11.37□□□□□ -0.59
TOP3A-208ENST00000542570 NLRC4Q9NPP4 1024 aa11.37□□□□□ -0.59
TOP3A-208ENST00000542570 FAM207AQ9NSI2 230 aaPredicted RBP11.37□□□□□ -0.59
TOP3A-208ENST00000542570 FBXO28Q9NVF7 368 aa11.37□□□□□ -0.59
TOP3A-208ENST00000542570 DNM3Q9UQ16 869 aa11.37□□□□□ -0.59
TOP3A-208ENST00000542570 NALCNQ8IZF0 1738 aa11.37□□□□□ -0.59
TOP3A-208ENST00000542570 RPAP1Q9BWH6 1393 aaPredicted RBP11.37□□□□□ -0.59
TOP3A-208ENST00000542570 ARHGEF35A5YM69 484 aa11.37□□□□□ -0.59
TOP3A-208ENST00000542570 GCOM1H8Y6P7 765 aaPredicted RBP11.37□□□□□ -0.59
TOP3A-208ENST00000542570 POLR2MP0CAP2 368 aa11.37□□□□□ -0.59
TOP3A-208ENST00000542570 STAT2P52630 851 aa11.37□□□□□ -0.59
TOP3A-208ENST00000542570 RASSF7Q02833 373 aa11.37□□□□□ -0.59
TOP3A-208ENST00000542570 GPATCH4Q5T3I0 446 aaKnown RBP11.37□□□□□ -0.59
TOP3A-208ENST00000542570 PPP4R3AQ6IN85 833 aa11.37□□□□□ -0.59
TOP3A-208ENST00000542570 SLC30A10Q6XR72 485 aa11.37□□□□□ -0.59
TOP3A-208ENST00000542570 GPBP1Q86WP2 473 aa11.37□□□□□ -0.59
TOP3A-208ENST00000542570 FOXP4Q8IVH2 680 aaPredicted RBP11.37□□□□□ -0.59
TOP3A-208ENST00000542570 GUCA1BQ9UMX6 200 aa11.37□□□□□ -0.59
TOP3A-208ENST00000542570 GCNT3O95395 438 aa11.36□□□□□ -0.59
TOP3A-208ENST00000542570 CAVIN2O95810 425 aa11.36□□□□□ -0.59
TOP3A-208ENST00000542570 ARHGEF16Q5VV41 709 aa11.36□□□□□ -0.59
TOP3A-208ENST00000542570 SYNRGQ9UMZ2 1314 aa11.36□□□□□ -0.59
TOP3A-208ENST00000542570 DDTLA6NHG4 134 aaPredicted RBP11.36□□□□□ -0.59
TOP3A-208ENST00000542570 TDP2O95551 362 aa11.36□□□□□ -0.59
TOP3A-208ENST00000542570 PRPF4BQ13523 1007 aaKnown RBP11.36□□□□□ -0.59
TOP3A-208ENST00000542570 MCM6Q14566 821 aa11.36□□□□□ -0.59
TOP3A-208ENST00000542570 CCDC70Q6NSX1 233 aa11.36□□□□□ -0.59
TOP3A-208ENST00000542570 SGMS1Q86VZ5 419 aa11.36□□□□□ -0.59
TOP3A-208ENST00000542570 ADGRF4Q8IZF3 695 aa11.36□□□□□ -0.59
TOP3A-208ENST00000542570 SAMSN1Q9NSI8 373 aaKnown RBP11.36□□□□□ -0.59
TOP3A-208ENST00000542570 ZNRF3Q9ULT6 936 aa11.36□□□□□ -0.59
TOP3A-208ENST00000542570 PAK1Q13153 545 aa11.36□□□□□ -0.59
TOP3A-208ENST00000542570 QRICH1Q2TAL8 776 aa11.36□□□□□ -0.59
TOP3A-208ENST00000542570 SYT10Q6XYQ8 523 aa11.36□□□□□ -0.59
TOP3A-208ENST00000542570 RGS22Q8NE09 1264 aa11.36□□□□□ -0.59
TOP3A-208ENST00000542570 HOOK2Q96ED9 719 aa11.36□□□□□ -0.59
TOP3A-208ENST00000542570 PSMB7Q99436 277 aa11.36□□□□□ -0.59
TOP3A-208ENST00000542570 DESI2Q9BSY9 194 aa11.36□□□□□ -0.59
TOP3A-208ENST00000542570 SWAP70Q9UH65 585 aa11.36□□□□□ -0.59
TOP3A-208ENST00000542570 FMN2Q9NZ56 1722 aa11.35□□□□□ -0.59
TOP3A-208ENST00000542570 TCRBV5S4A2TA0A5A2 114 aa11.35□□□□□ -0.59
TOP3A-208ENST00000542570 TMCO5BA8MYB1 307 aa11.35□□□□□ -0.59
TOP3A-208ENST00000542570 PCP11498 1178 aaKnown RBP11.35□□□□□ -0.59
TOP3A-208ENST00000542570 ECE1P42892 770 aa11.35□□□□□ -0.59
TOP3A-208ENST00000542570 GSDMDP57764 484 aa11.35□□□□□ -0.59
TOP3A-208ENST00000542570 ASPRV1Q53RT3 343 aa11.35□□□□□ -0.59
TOP3A-208ENST00000542570 STRIP1Q5VSL9 837 aa11.35□□□□□ -0.59
TOP3A-208ENST00000542570 SYDE2Q5VT97 1194 aa11.35□□□□□ -0.59
TOP3A-208ENST00000542570 NEDD1Q8NHV4 660 aa11.35□□□□□ -0.59
TOP3A-208ENST00000542570 PIGOQ8TEQ8 1089 aa11.35□□□□□ -0.59
TOP3A-208ENST00000542570 UBXN4Q92575 508 aa11.35□□□□□ -0.59
TOP3A-208ENST00000542570 HPS3Q969F9 1004 aa11.35□□□□□ -0.59
TOP3A-208ENST00000542570 MRPL44Q9H9J2 332 aaKnown RBP11.35□□□□□ -0.59
TOP3A-208ENST00000542570 SUGCTQ9HAC7 445 aa11.35□□□□□ -0.59
TOP3A-208ENST00000542570 KIF5CO60282 957 aa11.35□□□□□ -0.59
TOP3A-208ENST00000542570 RNASE9P60153 205 aaKnown RBP11.35□□□□□ -0.59
TOP3A-208ENST00000542570 AK9Q5TCS8 1911 aa11.35□□□□□ -0.59
TOP3A-208ENST00000542570 CCDC65Q8IXS2 484 aa11.35□□□□□ -0.59
TOP3A-208ENST00000542570 ACER1Q8TDN7 264 aa11.35□□□□□ -0.59
TOP3A-208ENST00000542570 ZNF668Q96K58 619 aaPredicted RBP11.35□□□□□ -0.59
TOP3A-208ENST00000542570 PPP1R16BQ96T49 567 aa11.35□□□□□ -0.59
TOP3A-208ENST00000542570 PYM1Q9BRP8 204 aaKnown RBP11.35□□□□□ -0.59
TOP3A-208ENST00000542570 MTMR4Q9NYA4 1195 aa11.35□□□□□ -0.59
TOP3A-208ENST00000542570 KIF20AO95235 890 aa11.35□□□□□ -0.59
TOP3A-208ENST00000542570 FGFR1OPO95684 399 aaKnown RBP11.35□□□□□ -0.59
TOP3A-208ENST00000542570 TNNT3P45378 269 aaPredicted RBP11.35□□□□□ -0.59
TOP3A-208ENST00000542570 TRAF1Q13077 416 aa11.35□□□□□ -0.59
TOP3A-208ENST00000542570 DCAF15Q66K64 600 aa11.35□□□□□ -0.59
TOP3A-208ENST00000542570 HS2ST1Q7LGA3 356 aa11.35□□□□□ -0.59
TOP3A-208ENST00000542570 GLG1Q92896 1179 aa11.35□□□□□ -0.59
TOP3A-208ENST00000542570 JADE2Q9NQC1 790 aa11.35□□□□□ -0.59
TOP3A-208ENST00000542570 DDX4Q9NQI0 724 aaKnown RBP11.35□□□□□ -0.59
TOP3A-208ENST00000542570 GDAQ9Y2T3 454 aa11.35□□□□□ -0.59
TOP3A-208ENST00000542570 DISP2A7MBM2 1401 aa11.34□□□□□ -0.59
TOP3A-208ENST00000542570 STAT3P40763 770 aa11.34□□□□□ -0.59
TOP3A-208ENST00000542570 GMPSP49915 693 aaPredicted RBP11.34□□□□□ -0.59
TOP3A-208ENST00000542570 PFKFB3Q16875 520 aaPredicted RBP11.34□□□□□ -0.59
TOP3A-208ENST00000542570 ANGEL2Q5VTE6 544 aaKnown RBP11.34□□□□□ -0.59
TOP3A-208ENST00000542570 SEPT14Q6ZU15 432 aa11.34□□□□□ -0.59
TOP3A-208ENST00000542570 TMEM179Q6ZVK1 233 aa11.34□□□□□ -0.59
TOP3A-208ENST00000542570 AKT1S1Q96B36 256 aa11.34□□□□□ -0.59
TOP3A-208ENST00000542570 CENPHQ9H3R5 247 aa11.34□□□□□ -0.59
TOP3A-208ENST00000542570 IVNS1ABPQ9Y6Y0 642 aa11.34□□□□□ -0.59
TOP3A-208ENST00000542570 NOP56O00567 594 aaKnown RBP11.34□□□□□ -0.59
TOP3A-208ENST00000542570 ZSCAN12O43309 604 aa11.34□□□□□ -0.59
TOP3A-208ENST00000542570 HMGCS2P54868 508 aa11.34□□□□□ -0.59
TOP3A-208ENST00000542570 TAF3Q5VWG9 929 aa11.34□□□□□ -0.59
TOP3A-208ENST00000542570 PROM2Q8N271 834 aa11.34□□□□□ -0.59
TOP3A-208ENST00000542570 PRR29P0C7W0 189 aa11.34□□□□□ -0.59
TOP3A-208ENST00000542570 PLCG1P19174 1290 aa11.34□□□□□ -0.59
TOP3A-208ENST00000542570 CYP2J2P51589 502 aa11.34□□□□□ -0.59
TOP3A-208ENST00000542570 TERF1P54274 439 aa11.34□□□□□ -0.59
TOP3A-208ENST00000542570 TROAPQ12815 778 aa11.34□□□□□ -0.59
TOP3A-208ENST00000542570 SHROOM1Q2M3G4 852 aaPredicted RBP11.34□□□□□ -0.59
TOP3A-208ENST00000542570 SHC4Q6S5L8 630 aa11.34□□□□□ -0.59
TOP3A-208ENST00000542570 MLKLQ8NB16 471 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms