RNA–Protein interactions for RNA: ENST00000542555.1

CLPB-211, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2

Gene CLPB, Length 421 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-211ENST00000542555 LMBR1LQ6UX01 489 aa10.01□□□□□ -0.81
CLPB-211ENST00000542555 MIGA2Q7L4E1 593 aa10.01□□□□□ -0.81
CLPB-211ENST00000542555 C7orf61Q8IZ16 206 aa10.01□□□□□ -0.81
CLPB-211ENST00000542555 PLPP7Q8NBV4 271 aa10.01□□□□□ -0.81
CLPB-211ENST00000542555 SMCR8Q8TEV9 937 aaPredicted RBP10.01□□□□□ -0.81
CLPB-211ENST00000542555 PRDM6Q9NQX0 595 aa10.01□□□□□ -0.81
CLPB-211ENST00000542555 PICK1Q9NRD5 415 aa10.01□□□□□ -0.81
CLPB-211ENST00000542555 C9orf78Q9NZ63 289 aaPredicted RBP10.01□□□□□ -0.81
CLPB-211ENST00000542555 AOX1Q06278 1338 aa10.01□□□□□ -0.81
CLPB-211ENST00000542555 C9orf172C9J069 976 aa10□□□□□ -0.81
CLPB-211ENST00000542555 CXCL11O14625 94 aa10□□□□□ -0.81
CLPB-211ENST00000542555 FLT3LGP49771 235 aa10□□□□□ -0.81
CLPB-211ENST00000542555 CACNB3P54284 484 aa10□□□□□ -0.81
CLPB-211ENST00000542555 LRRC69Q6ZNQ3 347 aa10□□□□□ -0.81
CLPB-211ENST00000542555 ZNF295-AS1Q8N0V1 137 aa10□□□□□ -0.81
CLPB-211ENST00000542555 PAWRQ96IZ0 340 aaKnown RBP10□□□□□ -0.81
CLPB-211ENST00000542555 ZDHHC15Q96MV8 337 aa10□□□□□ -0.81
CLPB-211ENST00000542555 MRIQ9BWK5 157 aa10□□□□□ -0.81
CLPB-211ENST00000542555 SUGT1Q9Y2Z0 365 aa10□□□□□ -0.81
CLPB-211ENST00000542555 OTOFQ9HC10 1997 aa10□□□□□ -0.81
CLPB-211ENST00000542555 MROH5Q6ZUA9 1318 aa10□□□□□ -0.81
CLPB-211ENST00000542555 ADGRA2Q96PE1 1338 aa10□□□□□ -0.81
CLPB-211ENST00000542555 IRS2Q9Y4H2 1338 aa10□□□□□ -0.81
CLPB-211ENST00000542555 TMEM229AB2RXF0 380 aa9.99□□□□□ -0.81
CLPB-211ENST00000542555 BACH1O14867 736 aa9.99□□□□□ -0.81
CLPB-211ENST00000542555 ELNP15502 786 aa9.99□□□□□ -0.81
CLPB-211ENST00000542555 CASP7P55210 303 aa9.99□□□□□ -0.81
CLPB-211ENST00000542555 IRF5Q13568 498 aa9.99□□□□□ -0.81
CLPB-211ENST00000542555 LRIT3Q3SXY7 679 aa9.99□□□□□ -0.81
CLPB-211ENST00000542555 GADL1Q6ZQY3 521 aa9.99□□□□□ -0.81
CLPB-211ENST00000542555 TDHQ8IZJ6 230 aa9.99□□□□□ -0.81
CLPB-211ENST00000542555 MICALL1Q8N3F8 863 aa9.99□□□□□ -0.81
CLPB-211ENST00000542555 TSPYL6Q8N831 410 aa9.99□□□□□ -0.81
CLPB-211ENST00000542555 FAM151AQ8WW52 585 aa9.99□□□□□ -0.81
CLPB-211ENST00000542555 ZNF594Q96JF6 807 aaPredicted RBP9.99□□□□□ -0.81
CLPB-211ENST00000542555 FAM84BQ96KN1 310 aaPredicted RBP9.99□□□□□ -0.81
CLPB-211ENST00000542555 UBE2OQ9C0C9 1292 aaKnown RBP9.99□□□□□ -0.81
CLPB-211ENST00000542555 ZMYND8Q9ULU4 1186 aaPredicted RBP9.99□□□□□ -0.81
CLPB-211ENST00000542555 GABRQQ9UN88 632 aa9.99□□□□□ -0.81
CLPB-211ENST00000542555 KCNH4Q9UQ05 1017 aa9.99□□□□□ -0.81
CLPB-211ENST00000542555 USP3Q9Y6I4 520 aa9.99□□□□□ -0.81
CLPB-211ENST00000542555 CYP2C8P10632 490 aa9.98□□□□□ -0.81
CLPB-211ENST00000542555 CTGFP29279 349 aa9.98□□□□□ -0.81
CLPB-211ENST00000542555 INPP5BP32019 993 aa9.98□□□□□ -0.81
CLPB-211ENST00000542555 FOXO4P98177 505 aa9.98□□□□□ -0.81
CLPB-211ENST00000542555 LRP8Q14114 963 aa9.98□□□□□ -0.81
CLPB-211ENST00000542555 HHIPL2Q6UWX4 724 aa9.98□□□□□ -0.81
CLPB-211ENST00000542555 G2E3Q7L622 706 aa9.98□□□□□ -0.81
CLPB-211ENST00000542555 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.98□□□□□ -0.81
CLPB-211ENST00000542555 TNFRSF25Q93038 417 aa9.98□□□□□ -0.81
CLPB-211ENST00000542555 GDF15Q99988 308 aa9.98□□□□□ -0.81
CLPB-211ENST00000542555 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.98□□□□□ -0.81
CLPB-211ENST00000542555 RPAP1Q9BWH6 1393 aaPredicted RBP9.98□□□□□ -0.81
CLPB-211ENST00000542555 ARAP2Q8WZ64 1704 aa9.97□□□□□ -0.81
CLPB-211ENST00000542555 ALBP02768 609 aa9.97□□□□□ -0.81
CLPB-211ENST00000542555 H2AFB1P0C5Y9 115 aa9.97□□□□□ -0.81
CLPB-211ENST00000542555 H2AFB2P0C5Z0 115 aa9.97□□□□□ -0.81
CLPB-211ENST00000542555 TXLNAP40222 546 aa9.97□□□□□ -0.81
CLPB-211ENST00000542555 VAC14Q08AM6 782 aa9.97□□□□□ -0.81
CLPB-211ENST00000542555 TCP10Q12799 353 aa9.97□□□□□ -0.81
CLPB-211ENST00000542555 METTL24Q5JXM2 366 aa9.97□□□□□ -0.81
CLPB-211ENST00000542555 NOL9Q5SY16 702 aaKnown RBP9.97□□□□□ -0.81
CLPB-211ENST00000542555 C8orf86Q6ZUL3 223 aa9.97□□□□□ -0.81
CLPB-211ENST00000542555 ZSCAN29Q8IWY8 852 aaPredicted RBP9.97□□□□□ -0.81
CLPB-211ENST00000542555 TSR2Q969E8 191 aaKnown RBP9.97□□□□□ -0.81
CLPB-211ENST00000542555 MDFIQ99750 246 aa9.97□□□□□ -0.81
CLPB-211ENST00000542555 C11orf49Q9H6J7 331 aa9.97□□□□□ -0.81
CLPB-211ENST00000542555 MTMR10Q9NXD2 777 aa9.97□□□□□ -0.81
CLPB-211ENST00000542555 SLC45A1Q9Y2W3 748 aa9.97□□□□□ -0.81
CLPB-211ENST00000542555 LRRFIP2Q9Y608 721 aaKnown RBP9.97□□□□□ -0.81
CLPB-211ENST00000542555 CEP290O15078 2479 aa9.97□□□□□ -0.81
CLPB-211ENST00000542555 GRM8O00222 908 aa9.96□□□□□ -0.82
CLPB-211ENST00000542555 IFIT1P09914 478 aaKnown RBP9.96□□□□□ -0.82
CLPB-211ENST00000542555 SYN1P17600 705 aa9.96□□□□□ -0.82
CLPB-211ENST00000542555 ADH7P40394 386 aa9.96□□□□□ -0.82
CLPB-211ENST00000542555 SEMA3FQ13275 785 aa9.96□□□□□ -0.82
CLPB-211ENST00000542555 PABPC4Q13310 644 aaKnown RBP eCLIP9.96□□□□□ -0.82
CLPB-211ENST00000542555 Q7L0L9 218 aa9.96□□□□□ -0.82
CLPB-211ENST00000542555 WDR66Q8TBY9 1149 aa9.96□□□□□ -0.82
CLPB-211ENST00000542555 PAK6Q9NQU5 681 aaPredicted RBP9.96□□□□□ -0.82
CLPB-211ENST00000542555 ZNF112Q9UJU3 913 aa9.96□□□□□ -0.82
CLPB-211ENST00000542555 ZNF232Q9UNY5 417 aa9.96□□□□□ -0.82
CLPB-211ENST00000542555 ZHX2Q9Y6X8 837 aa9.96□□□□□ -0.82
CLPB-211ENST00000542555 ZSWIM8A7E2V4 1837 aa9.96□□□□□ -0.82
CLPB-211ENST00000542555 HMGCRP04035 888 aa9.95□□□□□ -0.82
CLPB-211ENST00000542555 MAGEA10P43363 369 aaPredicted RBP9.95□□□□□ -0.82
CLPB-211ENST00000542555 SFSWAPQ12872 951 aaKnown RBP9.95□□□□□ -0.82
CLPB-211ENST00000542555 COL9A3Q14050 684 aaPredicted RBP9.95□□□□□ -0.82
CLPB-211ENST00000542555 APOBEC3HQ6NTF7 200 aaKnown RBP9.95□□□□□ -0.82
CLPB-211ENST00000542555 FBXO33Q7Z6M2 555 aa9.95□□□□□ -0.82
CLPB-211ENST00000542555 SCYL3Q8IZE3 742 aa9.95□□□□□ -0.82
CLPB-211ENST00000542555 KRTAP4-12Q9BQ66 201 aa9.95□□□□□ -0.82
CLPB-211ENST00000542555 LBHD1Q9BQE6 289 aaPredicted RBP9.95□□□□□ -0.82
CLPB-211ENST00000542555 STARD13Q9Y3M8 1113 aa9.95□□□□□ -0.82
CLPB-211ENST00000542555 RPTORQ8N122 1335 aa9.95□□□□□ -0.82
CLPB-211ENST00000542555 A0A0G2JLL6 359 aaPredicted RBP9.94□□□□□ -0.82
CLPB-211ENST00000542555 LILRB5O75023 590 aa9.94□□□□□ -0.82
CLPB-211ENST00000542555 NID1P14543 1247 aa9.94□□□□□ -0.82
CLPB-211ENST00000542555 GCLCP48506 637 aaPredicted RBP9.94□□□□□ -0.82
CLPB-211ENST00000542555 SPEM2Q0P670 501 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms