RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 ISY1Q9ULR0 285 aaKnown RBP18.47■□□□□ 0.55
VPS33A-206ENST00000542310 ZNF536O15090 1300 aa18.47■□□□□ 0.55
VPS33A-206ENST00000542310 HIP1O00291 1037 aa18.46■□□□□ 0.55
VPS33A-206ENST00000542310 SOX1O00570 391 aaPredicted RBP18.46■□□□□ 0.55
VPS33A-206ENST00000542310 NMT2O60551 498 aa18.46■□□□□ 0.55
VPS33A-206ENST00000542310 SNAI1O95863 264 aaPredicted RBP18.46■□□□□ 0.55
VPS33A-206ENST00000542310 TAL1P17542 331 aaPredicted RBP18.46■□□□□ 0.55
VPS33A-206ENST00000542310 B4GALNT3Q6L9W6 998 aa18.46■□□□□ 0.55
VPS33A-206ENST00000542310 EXOC6Q8TAG9 804 aa18.46■□□□□ 0.55
VPS33A-206ENST00000542310 FGD4Q96M96 766 aa18.46■□□□□ 0.55
VPS33A-206ENST00000542310 INCENPQ9NQS7 918 aa18.46■□□□□ 0.55
VPS33A-206ENST00000542310 FAM184BQ9ULE4 1060 aa18.46■□□□□ 0.55
VPS33A-206ENST00000542310 ADAMTS4O75173 837 aa18.45■□□□□ 0.54
VPS33A-206ENST00000542310 IGHDP01880 384 aa18.45■□□□□ 0.54
VPS33A-206ENST00000542310 TOP1P11387 765 aaKnown RBP18.45■□□□□ 0.54
VPS33A-206ENST00000542310 SDSP20132 328 aa18.45■□□□□ 0.54
VPS33A-206ENST00000542310 KCTD1Q719H9 257 aa18.45■□□□□ 0.54
VPS33A-206ENST00000542310 LBHD1Q9BQE6 289 aaPredicted RBP18.45■□□□□ 0.54
VPS33A-206ENST00000542310 TSEN34Q9BSV6 310 aaKnown RBP18.45■□□□□ 0.54
VPS33A-206ENST00000542310 ABHD16BQ9H3Z7 469 aa18.45■□□□□ 0.54
VPS33A-206ENST00000542310 RNF41Q9H4P4 317 aaPredicted RBP18.45■□□□□ 0.54
VPS33A-206ENST00000542310 TOMM22Q9NS69 142 aa18.45■□□□□ 0.54
VPS33A-206ENST00000542310 RNF146Q9NTX7 359 aa18.45■□□□□ 0.54
VPS33A-206ENST00000542310 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.45■□□□□ 0.54
VPS33A-206ENST00000542310 PRR12Q9ULL5 1215 aa18.45■□□□□ 0.54
VPS33A-206ENST00000542310 ATP11BQ9Y2G3 1177 aa18.45■□□□□ 0.54
VPS33A-206ENST00000542310 SYNRGQ9UMZ2 1314 aa18.45■□□□□ 0.54
VPS33A-206ENST00000542310 DUSP11O75319 330 aaKnown RBP18.44■□□□□ 0.54
VPS33A-206ENST00000542310 PGK1P00558 417 aa18.44■□□□□ 0.54
VPS33A-206ENST00000542310 MYCNP04198 464 aaPredicted RBP18.44■□□□□ 0.54
VPS33A-206ENST00000542310 CST5P28325 142 aaPredicted RBP18.44■□□□□ 0.54
VPS33A-206ENST00000542310 ADCYAP1R1P41586 468 aa18.44■□□□□ 0.54
VPS33A-206ENST00000542310 SLC4A3P48751 1232 aa18.44■□□□□ 0.54
VPS33A-206ENST00000542310 MDM2Q00987 491 aaPredicted RBP18.44■□□□□ 0.54
VPS33A-206ENST00000542310 TRIM60Q495X7 471 aa18.44■□□□□ 0.54
VPS33A-206ENST00000542310 AKNAD1Q5T1N1 836 aa18.44■□□□□ 0.54
VPS33A-206ENST00000542310 BTNL9Q6UXG8 535 aa18.44■□□□□ 0.54
VPS33A-206ENST00000542310 ARMCX2Q7L311 632 aa18.44■□□□□ 0.54
VPS33A-206ENST00000542310 FAM133AQ8N9E0 248 aa18.44■□□□□ 0.54
VPS33A-206ENST00000542310 A1CFQ9NQ94 594 aaKnown RBP18.44■□□□□ 0.54
VPS33A-206ENST00000542310 HOMER2Q9NSB8 354 aa18.44■□□□□ 0.54
VPS33A-206ENST00000542310 ZHX1Q9UKY1 873 aaPredicted RBP18.44■□□□□ 0.54
VPS33A-206ENST00000542310 A0A1W2PQ45 241 aaPredicted RBP18.43■□□□□ 0.54
VPS33A-206ENST00000542310 A0A1W2PQY0 241 aa18.43■□□□□ 0.54
VPS33A-206ENST00000542310 MOXD2PA6NHM9 499 aa18.43■□□□□ 0.54
VPS33A-206ENST00000542310 ACVR2BQ13705 512 aa18.43■□□□□ 0.54
VPS33A-206ENST00000542310 CCDC96Q2M329 555 aa18.43■□□□□ 0.54
VPS33A-206ENST00000542310 RRP12Q5JTH9 1297 aaKnown RBP18.43■□□□□ 0.54
VPS33A-206ENST00000542310 MFSD6Q6ZSS7 791 aa18.43■□□□□ 0.54
VPS33A-206ENST00000542310 LRCH3Q96II8 777 aa18.43■□□□□ 0.54
VPS33A-206ENST00000542310 AGBL1Q96MI9 1066 aa18.43■□□□□ 0.54
VPS33A-206ENST00000542310 TTC14Q96N46 770 aa18.43■□□□□ 0.54
VPS33A-206ENST00000542310 RANBP17Q9H2T7 1088 aaKnown RBP18.43■□□□□ 0.54
VPS33A-206ENST00000542310 DIAPH3Q9NSV4 1193 aa18.43■□□□□ 0.54
VPS33A-206ENST00000542310 POTEB2H3BUK9 544 aa18.42■□□□□ 0.54
VPS33A-206ENST00000542310 ICAM1P05362 532 aa18.42■□□□□ 0.54
VPS33A-206ENST00000542310 HAND2P61296 217 aa18.42■□□□□ 0.54
VPS33A-206ENST00000542310 RASGRP2Q7LDG7 609 aa18.42■□□□□ 0.54
VPS33A-206ENST00000542310 TBC1D10CQ8IV04 446 aa18.42■□□□□ 0.54
VPS33A-206ENST00000542310 KLHDC9Q8NEP7 349 aa18.42■□□□□ 0.54
VPS33A-206ENST00000542310 LENG1Q96BZ8 264 aaPredicted RBP18.42■□□□□ 0.54
VPS33A-206ENST00000542310 TRERF1Q96PN7 1200 aa18.42■□□□□ 0.54
VPS33A-206ENST00000542310 TMEM47Q9BQJ4 181 aa18.42■□□□□ 0.54
VPS33A-206ENST00000542310 KATNBL1Q9H079 304 aa18.42■□□□□ 0.54
VPS33A-206ENST00000542310 UPF3AQ9H1J1 476 aaKnown RBP18.42■□□□□ 0.54
VPS33A-206ENST00000542310 PDLIM7Q9NR12 457 aa18.42■□□□□ 0.54
VPS33A-206ENST00000542310 PNMA2Q9UL42 364 aa18.42■□□□□ 0.54
VPS33A-206ENST00000542310 ASB14A6NK59 587 aa18.41■□□□□ 0.54
VPS33A-206ENST00000542310 ALAS1P13196 640 aa18.41■□□□□ 0.54
VPS33A-206ENST00000542310 CCDC144CPQ8IYA2 1237 aa18.41■□□□□ 0.54
VPS33A-206ENST00000542310 NUP133Q8WUM0 1156 aa18.41■□□□□ 0.54
VPS33A-206ENST00000542310 ESR2Q92731 530 aa18.41■□□□□ 0.54
VPS33A-206ENST00000542310 FERMT2Q96AC1 680 aa18.41■□□□□ 0.54
VPS33A-206ENST00000542310 CCPG1Q9ULG6 757 aa18.41■□□□□ 0.54
VPS33A-206ENST00000542310 SNHG28P0DPA3 235 aa18.4■□□□□ 0.54
VPS33A-206ENST00000542310 PDHBP11177 359 aa18.4■□□□□ 0.54
VPS33A-206ENST00000542310 NKX3-2P78367 333 aa18.4■□□□□ 0.54
VPS33A-206ENST00000542310 CCDC144BQ3MJ40 725 aa18.4■□□□□ 0.54
VPS33A-206ENST00000542310 SYDE2Q5VT97 1194 aa18.4■□□□□ 0.54
VPS33A-206ENST00000542310 CCSAPQ6IQ19 270 aaPredicted RBP18.4■□□□□ 0.54
VPS33A-206ENST00000542310 CCDC174Q6PII3 467 aa18.4■□□□□ 0.54
VPS33A-206ENST00000542310 DSCC1Q9BVC3 393 aa18.4■□□□□ 0.54
VPS33A-206ENST00000542310 SPC25Q9HBM1 224 aa18.4■□□□□ 0.54
VPS33A-206ENST00000542310 NEDD4P46934 1319 aa18.4■□□□□ 0.54
VPS33A-206ENST00000542310 LOC102724159A0A0B4J2E5 919 aa18.39■□□□□ 0.53
VPS33A-206ENST00000542310 ZNF213O14771 459 aa18.39■□□□□ 0.53
VPS33A-206ENST00000542310 ACLYP53396 1101 aa18.39■□□□□ 0.53
VPS33A-206ENST00000542310 GJA9P57773 515 aa18.39■□□□□ 0.53
VPS33A-206ENST00000542310 CNTN2Q02246 1040 aa18.39■□□□□ 0.53
VPS33A-206ENST00000542310 PWP2Q15269 919 aaKnown RBP18.39■□□□□ 0.53
VPS33A-206ENST00000542310 CCDC178Q5BJE1 867 aa18.39■□□□□ 0.53
VPS33A-206ENST00000542310 CWC27Q6UX04 472 aaKnown RBP18.39■□□□□ 0.53
VPS33A-206ENST00000542310 PCSK9Q8NBP7 692 aaKnown RBP18.39■□□□□ 0.53
VPS33A-206ENST00000542310 PRDM5Q9NQX1 630 aaPredicted RBP18.39■□□□□ 0.53
VPS33A-206ENST00000542310 STARD7Q9NQZ5 370 aa18.39■□□□□ 0.53
VPS33A-206ENST00000542310 CYP39A1Q9NYL5 469 aa18.39■□□□□ 0.53
VPS33A-206ENST00000542310 MTMR7Q9Y216 660 aa18.39■□□□□ 0.53
VPS33A-206ENST00000542310 MYH6P13533 1939 aa18.39■□□□□ 0.53
VPS33A-206ENST00000542310 SOWAHBA6NEL2 793 aa18.38■□□□□ 0.53
VPS33A-206ENST00000542310 ADCY6O43306 1168 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms