RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 GDF11O95390 407 aa17.92■□□□□ 0.46
VARS2-212ENST00000542001 MCM3P25205 808 aa17.92■□□□□ 0.46
VARS2-212ENST00000542001 ITPK1Q13572 414 aa17.92■□□□□ 0.46
VARS2-212ENST00000542001 CCDC25Q86WR0 208 aa17.92■□□□□ 0.46
VARS2-212ENST00000542001 TPH2Q8IWU9 490 aa17.92■□□□□ 0.46
VARS2-212ENST00000542001 DDAH1O94760 285 aa17.92■□□□□ 0.46
VARS2-212ENST00000542001 ARHGAP44Q17R89 818 aa17.92■□□□□ 0.46
VARS2-212ENST00000542001 KSR1Q8IVT5 923 aa17.92■□□□□ 0.46
VARS2-212ENST00000542001 KCNB2Q92953 911 aa17.92■□□□□ 0.46
VARS2-212ENST00000542001 BICD1Q96G01 975 aa17.92■□□□□ 0.46
VARS2-212ENST00000542001 PSTPIP2Q9H939 334 aa17.92■□□□□ 0.46
VARS2-212ENST00000542001 TMEM260Q9NX78 707 aa17.92■□□□□ 0.46
VARS2-212ENST00000542001 KIAA1024Q9UPX6 916 aa17.92■□□□□ 0.46
VARS2-212ENST00000542001 EFCAB8A8MWE9 144 aa17.91■□□□□ 0.46
VARS2-212ENST00000542001 HGSO14964 777 aaPredicted RBP17.91■□□□□ 0.46
VARS2-212ENST00000542001 ERCC5P28715 1186 aaPredicted RBP17.91■□□□□ 0.46
VARS2-212ENST00000542001 CASP7P55210 303 aa17.91■□□□□ 0.46
VARS2-212ENST00000542001 PABPC4Q13310 644 aaKnown RBP eCLIP17.91■□□□□ 0.462e-8■■■■□ 24.4
VARS2-212ENST00000542001 GPBP1Q86WP2 473 aa17.91■□□□□ 0.46
VARS2-212ENST00000542001 POTEMA6NI47 508 aa17.91■□□□□ 0.46
VARS2-212ENST00000542001 TRIM37O94972 964 aa17.91■□□□□ 0.46
VARS2-212ENST00000542001 GCNT3O95395 438 aa17.91■□□□□ 0.46
VARS2-212ENST00000542001 ABCB4P21439 1286 aa17.91■□□□□ 0.46
VARS2-212ENST00000542001 POLR2FP61218 127 aaKnown RBP17.91■□□□□ 0.46
VARS2-212ENST00000542001 LRRC27Q9C0I9 530 aa17.91■□□□□ 0.46
VARS2-212ENST00000542001 PCDHA4Q9UN74 947 aa17.91■□□□□ 0.46
VARS2-212ENST00000542001 KIF20BQ96Q89 1820 aa17.91■□□□□ 0.46
VARS2-212ENST00000542001 COL15A1P39059 1388 aa17.91■□□□□ 0.46
VARS2-212ENST00000542001 HARSP12081 509 aaKnown RBP17.91■□□□□ 0.46
VARS2-212ENST00000542001 KLHL30Q0D2K2 578 aa17.91■□□□□ 0.46
VARS2-212ENST00000542001 PRKG1Q13976 671 aa17.91■□□□□ 0.46
VARS2-212ENST00000542001 GPR161Q8N6U8 529 aaKnown RBP17.91■□□□□ 0.46
VARS2-212ENST00000542001 GJA10Q969M2 543 aa17.91■□□□□ 0.46
VARS2-212ENST00000542001 BSDC1Q9NW68 430 aaPredicted RBP17.91■□□□□ 0.46
VARS2-212ENST00000542001 CETN3O15182 167 aa17.9■□□□□ 0.46
VARS2-212ENST00000542001 CEP104O60308 925 aa17.9■□□□□ 0.46
VARS2-212ENST00000542001 PRCPP42785 496 aa17.9■□□□□ 0.46
VARS2-212ENST00000542001 C8orf74Q6P047 294 aa17.9■□□□□ 0.46
VARS2-212ENST00000542001 HS2ST1Q7LGA3 356 aa17.9■□□□□ 0.46
VARS2-212ENST00000542001 PARP3Q9Y6F1 533 aa17.9■□□□□ 0.46
VARS2-212ENST00000542001 H7C1D1 291 aa17.9■□□□□ 0.46
VARS2-212ENST00000542001 NAA35Q5VZE5 725 aa17.9■□□□□ 0.46
VARS2-212ENST00000542001 PCDHA1Q9Y5I3 950 aa17.9■□□□□ 0.46
VARS2-212ENST00000542001 RASSF7Q02833 373 aa17.9■□□□□ 0.46
VARS2-212ENST00000542001 ILDR1Q86SU0 546 aaPredicted RBP17.9■□□□□ 0.46
VARS2-212ENST00000542001 SGMS1Q86VZ5 419 aa17.9■□□□□ 0.46
VARS2-212ENST00000542001 KIFC2Q96AC6 838 aa17.9■□□□□ 0.46
VARS2-212ENST00000542001 LSM14BQ9BX40 385 aaKnown RBP17.9■□□□□ 0.46
VARS2-212ENST00000542001 FBXO2Q9UK22 296 aaPredicted RBP17.9■□□□□ 0.46
VARS2-212ENST00000542001 VAV2P52735 878 aa17.89■□□□□ 0.46
VARS2-212ENST00000542001 SF3B2Q13435 895 aaKnown RBP17.89■□□□□ 0.46
VARS2-212ENST00000542001 LONRF2Q1L5Z9 754 aa17.89■□□□□ 0.46
VARS2-212ENST00000542001 TMEM47Q9BQJ4 181 aa17.89■□□□□ 0.46
VARS2-212ENST00000542001 HDAC6Q9UBN7 1215 aa17.89■□□□□ 0.46
VARS2-212ENST00000542001 CDC23Q9UJX2 597 aa17.89■□□□□ 0.45
VARS2-212ENST00000542001 PXDNLA1KZ92 1463 aa17.89■□□□□ 0.45
VARS2-212ENST00000542001 FAM212AQ96EL1 285 aa17.89■□□□□ 0.45
VARS2-212ENST00000542001 MRPL44Q9H9J2 332 aaKnown RBP17.89■□□□□ 0.45
VARS2-212ENST00000542001 CLRN2A0PK11 232 aa17.88■□□□□ 0.45
VARS2-212ENST00000542001 SERPINB2P05120 415 aa17.88■□□□□ 0.45
VARS2-212ENST00000542001 DNM2P50570 870 aa17.88■□□□□ 0.45
VARS2-212ENST00000542001 MYCT1Q8N699 235 aa17.88■□□□□ 0.45
VARS2-212ENST00000542001 OSBPL5Q9H0X9 879 aaPredicted RBP17.88■□□□□ 0.45
VARS2-212ENST00000542001 THRAP3Q9Y2W1 955 aaKnown RBP17.88■□□□□ 0.45
VARS2-212ENST00000542001 SPATA31D1Q6ZQQ2 1576 aa17.88■□□□□ 0.45
VARS2-212ENST00000542001 ANKRD62A6NC57 917 aa17.88■□□□□ 0.45
VARS2-212ENST00000542001 USP17L5A8MUK1 530 aa17.88■□□□□ 0.45
VARS2-212ENST00000542001 CDK8P49336 464 aa17.88■□□□□ 0.45
VARS2-212ENST00000542001 CETN1Q12798 172 aa17.88■□□□□ 0.45
VARS2-212ENST00000542001 TCP10L2B9ZVM9 353 aa17.88■□□□□ 0.45
VARS2-212ENST00000542001 PNMA6AP0CW24 399 aaPredicted RBP17.88■□□□□ 0.45
VARS2-212ENST00000542001 CYP2J2P51589 502 aa17.88■□□□□ 0.45
VARS2-212ENST00000542001 KIAA0753Q2KHM9 967 aa17.88■□□□□ 0.45
VARS2-212ENST00000542001 GSPT2Q8IYD1 628 aaKnown RBP17.88■□□□□ 0.45
VARS2-212ENST00000542001 MARCH10Q8NA82 808 aaPredicted RBP17.88■□□□□ 0.45
VARS2-212ENST00000542001 LONP1P36776 959 aaKnown RBP17.88■□□□□ 0.45
VARS2-212ENST00000542001 SLC7A5Q01650 507 aa17.88■□□□□ 0.45
VARS2-212ENST00000542001 SLC9C1Q4G0N8 1177 aa17.88■□□□□ 0.45
VARS2-212ENST00000542001 CFAP58Q5T655 872 aa17.88■□□□□ 0.45
VARS2-212ENST00000542001 AGLP35573 1532 aa17.87■□□□□ 0.45
VARS2-212ENST00000542001 SFI1A8K8P3 1242 aa17.87■□□□□ 0.45
VARS2-212ENST00000542001 ATP1A2P50993 1020 aa17.87■□□□□ 0.45
VARS2-212ENST00000542001 TRIM14Q14142 442 aa17.87■□□□□ 0.45
VARS2-212ENST00000542001 KCTD16Q68DU8 428 aa17.87■□□□□ 0.45
VARS2-212ENST00000542001 ADGRA1Q86SQ6 560 aa17.87■□□□□ 0.45
VARS2-212ENST00000542001 USP32Q8NFA0 1604 aa17.87■□□□□ 0.45
VARS2-212ENST00000542001 CHP1Q99653 195 aa17.87■□□□□ 0.45
VARS2-212ENST00000542001 DDX25Q9UHL0 483 aaKnown RBP17.87■□□□□ 0.45
VARS2-212ENST00000542001 CDHR2Q9BYE9 1310 aa17.87■□□□□ 0.45
VARS2-212ENST00000542001 MYCLP12524 364 aaPredicted RBP17.87■□□□□ 0.45
VARS2-212ENST00000542001 MYOCDQ8IZQ8 938 aa17.87■□□□□ 0.45
VARS2-212ENST00000542001 MICALL1Q8N3F8 863 aa17.87■□□□□ 0.45
VARS2-212ENST00000542001 ITSN1Q15811 1721 aa17.87■□□□□ 0.45
VARS2-212ENST00000542001 RDXP35241 583 aaKnown RBP17.87■□□□□ 0.45
VARS2-212ENST00000542001 GABPB1Q06547 395 aaPredicted RBP17.87■□□□□ 0.45
VARS2-212ENST00000542001 NFIXQ14938 502 aa17.87■□□□□ 0.45
VARS2-212ENST00000542001 UHMK1Q8TAS1 419 aaKnown RBP17.87■□□□□ 0.45
VARS2-212ENST00000542001 TRIM10Q9UDY6 481 aa17.87■□□□□ 0.45
VARS2-212ENST00000542001 USP17L15C9J2P7 530 aa17.86■□□□□ 0.45
VARS2-212ENST00000542001 USP17L13C9JLJ4 530 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms