RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 ERICH6BQ5W0A0 696 aa11.91□□□□□ -0.5
CHFR-220ENST00000541817 NOL8Q76FK4 1167 aaKnown RBP11.91□□□□□ -0.5
CHFR-220ENST00000541817 MRPL50Q8N5N7 158 aaKnown RBP11.91□□□□□ -0.5
CHFR-220ENST00000541817 MIGA1Q8NAN2 632 aa11.91□□□□□ -0.5
CHFR-220ENST00000541817 SLC9A7Q96T83 725 aa11.91□□□□□ -0.5
CHFR-220ENST00000541817 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.91□□□□□ -0.5
CHFR-220ENST00000541817 STAT3P40763 770 aa11.9□□□□□ -0.5
CHFR-220ENST00000541817 DDX11Q96FC9 970 aa11.9□□□□□ -0.5
CHFR-220ENST00000541817 FTOQ9C0B1 505 aaKnown RBP eCLIP11.9□□□□□ -0.5
CHFR-220ENST00000541817 TRMT13Q9NUP7 481 aaKnown RBP11.9□□□□□ -0.5
CHFR-220ENST00000541817 AKAP2Q9Y2D5 859 aa11.9□□□□□ -0.5
CHFR-220ENST00000541817 ZDBF2Q9HCK1 2354 aa11.89□□□□□ -0.51
CHFR-220ENST00000541817 UBTFL1P0CB47 393 aaPredicted RBP11.89□□□□□ -0.51
CHFR-220ENST00000541817 ACTN1P12814 892 aa11.89□□□□□ -0.51
CHFR-220ENST00000541817 CYP7A1P22680 504 aa11.89□□□□□ -0.51
CHFR-220ENST00000541817 TMEM63BQ5T3F8 832 aa11.89□□□□□ -0.51
CHFR-220ENST00000541817 SIAH1Q8IUQ4 282 aa11.89□□□□□ -0.51
CHFR-220ENST00000541817 WDR63Q8IWG1 891 aa11.89□□□□□ -0.51
CHFR-220ENST00000541817 COPRSQ9NQ92 184 aa11.89□□□□□ -0.51
CHFR-220ENST00000541817 LMCD1Q9NZU5 365 aa11.89□□□□□ -0.51
CHFR-220ENST00000541817 RIPK3Q9Y572 518 aa11.89□□□□□ -0.51
CHFR-220ENST00000541817 DDX49Q9Y6V7 483 aaKnown RBP11.89□□□□□ -0.51
CHFR-220ENST00000541817 TET1Q8NFU7 2136 aa11.89□□□□□ -0.51
CHFR-220ENST00000541817 COL4A6Q14031 1691 aa11.88□□□□□ -0.51
CHFR-220ENST00000541817 C19orf67A6NJJ6 358 aa11.88□□□□□ -0.51
CHFR-220ENST00000541817 CYP2E1P05181 493 aaPredicted RBP11.88□□□□□ -0.51
CHFR-220ENST00000541817 MAMDC4Q6UXC1 1216 aa11.88□□□□□ -0.51
CHFR-220ENST00000541817 PHOSPHO2Q8TCD6 241 aa11.88□□□□□ -0.51
CHFR-220ENST00000541817 ATOH1Q92858 354 aaPredicted RBP11.88□□□□□ -0.51
CHFR-220ENST00000541817 PBXIP1Q96AQ6 731 aa11.88□□□□□ -0.51
CHFR-220ENST00000541817 FGD4Q96M96 766 aa11.88□□□□□ -0.51
CHFR-220ENST00000541817 ZBED2Q9BTP6 218 aa11.88□□□□□ -0.51
CHFR-220ENST00000541817 EHD4Q9H223 541 aa11.88□□□□□ -0.51
CHFR-220ENST00000541817 PIH1D3Q9NQM4 214 aaKnown RBP11.88□□□□□ -0.51
CHFR-220ENST00000541817 ZNF214Q9UL59 606 aaPredicted RBP11.88□□□□□ -0.51
CHFR-220ENST00000541817 PLXNA3P51805 1871 aa11.88□□□□□ -0.51
CHFR-220ENST00000541817 TECTAO75443 2155 aa11.88□□□□□ -0.51
CHFR-220ENST00000541817 VWA5AO00534 786 aa11.87□□□□□ -0.51
CHFR-220ENST00000541817 DYNC1LI2O43237 492 aaPredicted RBP11.87□□□□□ -0.51
CHFR-220ENST00000541817 RAD21O60216 631 aa11.87□□□□□ -0.51
CHFR-220ENST00000541817 DEFB103AP81534 67 aa11.87□□□□□ -0.51
CHFR-220ENST00000541817 CLUL1Q15846 466 aa11.87□□□□□ -0.51
CHFR-220ENST00000541817 ASCL5Q7RTU5 278 aa11.87□□□□□ -0.51
CHFR-220ENST00000541817 TTC6Q86TZ1 520 aa11.87□□□□□ -0.51
CHFR-220ENST00000541817 NEK9Q8TD19 979 aa11.87□□□□□ -0.51
CHFR-220ENST00000541817 ALDH8A1Q9H2A2 487 aaPredicted RBP11.87□□□□□ -0.51
CHFR-220ENST00000541817 ALG13Q9NP73 1137 aaKnown RBP11.87□□□□□ -0.51
CHFR-220ENST00000541817 ADAMTS5Q9UNA0 930 aa11.87□□□□□ -0.51
CHFR-220ENST00000541817 DNAJC25-GNG10A0A024R161 153 aa11.86□□□□□ -0.51
CHFR-220ENST00000541817 TMEM221A6NGB7 291 aa11.86□□□□□ -0.51
CHFR-220ENST00000541817 M0R296 226 aa11.86□□□□□ -0.51
CHFR-220ENST00000541817 POLR3DP05423 398 aaPredicted RBP11.86□□□□□ -0.51
CHFR-220ENST00000541817 PFKMP08237 780 aa11.86□□□□□ -0.51
CHFR-220ENST00000541817 TNFAIP2Q03169 654 aa11.86□□□□□ -0.51
CHFR-220ENST00000541817 FSCN1Q16658 493 aaKnown RBP11.86□□□□□ -0.51
CHFR-220ENST00000541817 FAM117BQ6P1L5 589 aa11.86□□□□□ -0.51
CHFR-220ENST00000541817 ARMCX2Q7L311 632 aa11.86□□□□□ -0.51
CHFR-220ENST00000541817 RNF135Q8IUD6 432 aa11.86□□□□□ -0.51
CHFR-220ENST00000541817 ADHFE1Q8IWW8 467 aa11.86□□□□□ -0.51
CHFR-220ENST00000541817 MSL3Q8N5Y2 521 aaKnown RBP11.86□□□□□ -0.51
CHFR-220ENST00000541817 REPS2Q8NFH8 660 aa11.86□□□□□ -0.51
CHFR-220ENST00000541817 KATNBL1Q9H079 304 aa11.86□□□□□ -0.51
CHFR-220ENST00000541817 ABHD16BQ9H3Z7 469 aa11.86□□□□□ -0.51
CHFR-220ENST00000541817 VCPKMTQ9H867 229 aa11.86□□□□□ -0.51
CHFR-220ENST00000541817 KMT2EQ8IZD2 1858 aa11.86□□□□□ -0.51
CHFR-220ENST00000541817 ZFHX2Q9C0A1 2572 aaPredicted RBP11.86□□□□□ -0.51
CHFR-220ENST00000541817 SPTBN4Q9H254 2564 aa11.85□□□□□ -0.51
CHFR-220ENST00000541817 H0Y858 1186 aa11.85□□□□□ -0.51
CHFR-220ENST00000541817 WDR46O15213 610 aaKnown RBP11.85□□□□□ -0.51
CHFR-220ENST00000541817 UQCRFS1P1P0C7P4 283 aa11.85□□□□□ -0.51
CHFR-220ENST00000541817 CYP2D6P10635 497 aa11.85□□□□□ -0.51
CHFR-220ENST00000541817 ZAP70P43403 619 aa11.85□□□□□ -0.51
CHFR-220ENST00000541817 VCPP55072 806 aaKnown RBP11.85□□□□□ -0.51
CHFR-220ENST00000541817 PUS10Q3MIT2 529 aaKnown RBP11.85□□□□□ -0.51
CHFR-220ENST00000541817 TTC39AQ5SRH9 613 aa11.85□□□□□ -0.51
CHFR-220ENST00000541817 SNRNP48Q6IEG0 339 aaKnown RBP11.85□□□□□ -0.51
CHFR-220ENST00000541817 TLK2Q86UE8 772 aa11.85□□□□□ -0.51
CHFR-220ENST00000541817 CCDC144CPQ8IYA2 1237 aa11.85□□□□□ -0.51
CHFR-220ENST00000541817 CPXCR1Q8N123 301 aa11.85□□□□□ -0.51
CHFR-220ENST00000541817 TLR9Q9NR96 1032 aa11.85□□□□□ -0.51
CHFR-220ENST00000541817 TSHZ2Q9NRE2 1034 aa11.85□□□□□ -0.51
CHFR-220ENST00000541817 SIP14410 1827 aa11.85□□□□□ -0.51
CHFR-220ENST00000541817 TNKSO95271 1327 aa11.85□□□□□ -0.51
CHFR-220ENST00000541817 DCHS1Q96JQ0 3298 aa11.84□□□□□ -0.51
CHFR-220ENST00000541817 CABYRO75952 493 aa11.84□□□□□ -0.51
CHFR-220ENST00000541817 IQCF3P0C7M6 154 aa11.84□□□□□ -0.51
CHFR-220ENST00000541817 AKR1B1P15121 316 aa11.84□□□□□ -0.51
CHFR-220ENST00000541817 ID4P47928 161 aa11.84□□□□□ -0.51
CHFR-220ENST00000541817 KCNJ6P48051 423 aa11.84□□□□□ -0.51
CHFR-220ENST00000541817 ERVK-21P61565 698 aa11.84□□□□□ -0.51
CHFR-220ENST00000541817 WDR5P61964 334 aaKnown RBP11.84□□□□□ -0.51
CHFR-220ENST00000541817 CNTN2Q02246 1040 aa11.84□□□□□ -0.51
CHFR-220ENST00000541817 GABPAQ06546 454 aa11.84□□□□□ -0.51
CHFR-220ENST00000541817 TCTN1Q2MV58 587 aa11.84□□□□□ -0.51
CHFR-220ENST00000541817 HERC4Q5GLZ8 1057 aaPredicted RBP11.84□□□□□ -0.51
CHFR-220ENST00000541817 FAM83BQ5T0W9 1011 aa11.84□□□□□ -0.51
CHFR-220ENST00000541817 EEPD1Q7L9B9 569 aa11.84□□□□□ -0.51
CHFR-220ENST00000541817 ERMP1Q7Z2K6 904 aa11.84□□□□□ -0.51
CHFR-220ENST00000541817 SUGP1Q8IWZ8 645 aaKnown RBP11.84□□□□□ -0.51
CHFR-220ENST00000541817 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms