RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 FCRL2Q96LA5 508 aaPredicted RBP6.18□□□□□ -1.42
SNHG1-217ENST00000541578 PPP1R16BQ96T49 567 aa6.18□□□□□ -1.42
SNHG1-217ENST00000541578 TINF2Q9BSI4 451 aa6.18□□□□□ -1.42
SNHG1-217ENST00000541578 SF3B6Q9Y3B4 125 aaKnown RBP6.18□□□□□ -1.42
SNHG1-217ENST00000541578 A0A087WZG4 1122 aa6.17□□□□□ -1.42
SNHG1-217ENST00000541578 NRDCO43847 1150 aa6.17□□□□□ -1.42
SNHG1-217ENST00000541578 NCLP19338 710 aaKnown RBP6.17□□□□□ -1.42
SNHG1-217ENST00000541578 PDE6BP35913 854 aa6.17□□□□□ -1.42
SNHG1-217ENST00000541578 NOP2P46087 812 aaKnown RBP6.17□□□□□ -1.42
SNHG1-217ENST00000541578 RAP1GAPP47736 663 aa6.17□□□□□ -1.42
SNHG1-217ENST00000541578 CASP7P55210 303 aa6.17□□□□□ -1.42
SNHG1-217ENST00000541578 DPH6Q7L8W6 267 aa6.17□□□□□ -1.42
SNHG1-217ENST00000541578 NLRX1Q86UT6 975 aa6.17□□□□□ -1.42
SNHG1-217ENST00000541578 SHISA4Q96DD7 197 aa6.17□□□□□ -1.42
SNHG1-217ENST00000541578 INTS4Q96HW7 963 aaKnown RBP6.17□□□□□ -1.42
SNHG1-217ENST00000541578 KCNK12Q9HB15 430 aa6.17□□□□□ -1.42
SNHG1-217ENST00000541578 AP5S1Q9NUS5 200 aa6.17□□□□□ -1.42
SNHG1-217ENST00000541578 PCDHB10Q9UN67 800 aa6.17□□□□□ -1.42
SNHG1-217ENST00000541578 WTIPA6NIX2 430 aaPredicted RBP6.16□□□□□ -1.42
SNHG1-217ENST00000541578 FADS2P1A8MWK0 482 aa6.16□□□□□ -1.42
SNHG1-217ENST00000541578 H0Y8X5 98 aa6.16□□□□□ -1.42
SNHG1-217ENST00000541578 GSTM1P09488 218 aa6.16□□□□□ -1.42
SNHG1-217ENST00000541578 TMEM253P0C7T8 217 aa6.16□□□□□ -1.42
SNHG1-217ENST00000541578 ATF4P18848 351 aaPredicted RBP6.16□□□□□ -1.42
SNHG1-217ENST00000541578 SOGA3Q5TF21 947 aa6.16□□□□□ -1.42
SNHG1-217ENST00000541578 HEATR6Q6AI08 1181 aaKnown RBP6.16□□□□□ -1.42
SNHG1-217ENST00000541578 GALNT18Q6P9A2 607 aa6.16□□□□□ -1.42
SNHG1-217ENST00000541578 KRTAP1-3Q8IUG1 177 aa6.16□□□□□ -1.42
SNHG1-217ENST00000541578 SIRT2Q8IXJ6 389 aa6.16□□□□□ -1.42
SNHG1-217ENST00000541578 FIBCD1Q8N539 461 aa6.16□□□□□ -1.42
SNHG1-217ENST00000541578 PMFBP1Q8TBY8 1022 aa6.16□□□□□ -1.42
SNHG1-217ENST00000541578 ANAPC16Q96DE5 110 aa6.16□□□□□ -1.42
SNHG1-217ENST00000541578 HAUS7Q99871 368 aa6.16□□□□□ -1.42
SNHG1-217ENST00000541578 SLC12A9Q9BXP2 914 aa6.16□□□□□ -1.42
SNHG1-217ENST00000541578 DIS3Q9Y2L1 958 aaKnown RBP6.16□□□□□ -1.42
SNHG1-217ENST00000541578 DBX1A6NMT0 343 aa6.15□□□□□ -1.42
SNHG1-217ENST00000541578 PPM1GO15355 546 aaPredicted RBP6.15□□□□□ -1.42
SNHG1-217ENST00000541578 CBFA2T2O43439 604 aa6.15□□□□□ -1.42
SNHG1-217ENST00000541578 STK10O94804 968 aaKnown RBP6.15□□□□□ -1.42
SNHG1-217ENST00000541578 GALK1P51570 392 aa6.15□□□□□ -1.42
SNHG1-217ENST00000541578 FZD5Q13467 585 aa6.15□□□□□ -1.42
SNHG1-217ENST00000541578 RTP2Q5QGT7 225 aa6.15□□□□□ -1.42
SNHG1-217ENST00000541578 ADAT2Q7Z6V5 191 aaKnown RBP6.15□□□□□ -1.42
SNHG1-217ENST00000541578 KCNN1Q92952 543 aa6.15□□□□□ -1.42
SNHG1-217ENST00000541578 ARMC5Q96C12 935 aa6.15□□□□□ -1.42
SNHG1-217ENST00000541578 ZDHHC15Q96MV8 337 aa6.15□□□□□ -1.42
SNHG1-217ENST00000541578 SLC26A8Q96RN1 970 aa6.15□□□□□ -1.42
SNHG1-217ENST00000541578 HIRIP3Q9BW71 556 aaPredicted RBP6.15□□□□□ -1.42
SNHG1-217ENST00000541578 GBP3Q9H0R5 595 aa6.15□□□□□ -1.42
SNHG1-217ENST00000541578 NOL6Q9H6R4 1146 aaKnown RBP6.15□□□□□ -1.42
SNHG1-217ENST00000541578 CRTAC1Q9NQ79 661 aa6.15□□□□□ -1.42
SNHG1-217ENST00000541578 ERVK13-1Q9NX77 482 aa6.15□□□□□ -1.42
SNHG1-217ENST00000541578 WHRNQ9P202 907 aa6.15□□□□□ -1.42
SNHG1-217ENST00000541578 GPR55Q9Y2T6 319 aaPredicted RBP6.15□□□□□ -1.42
SNHG1-217ENST00000541578 TAF6LQ9Y6J9 622 aa6.15□□□□□ -1.42
SNHG1-217ENST00000541578 A0A1W2PQ45 241 aaPredicted RBP6.14□□□□□ -1.43
SNHG1-217ENST00000541578 A0A1W2PQY0 241 aa6.14□□□□□ -1.43
SNHG1-217ENST00000541578 NFIBO00712 420 aa6.14□□□□□ -1.43
SNHG1-217ENST00000541578 PPM1BO75688 479 aa6.14□□□□□ -1.43
SNHG1-217ENST00000541578 TSPAN15O95858 294 aa6.14□□□□□ -1.43
SNHG1-217ENST00000541578 EFEMP2O95967 443 aa6.14□□□□□ -1.43
SNHG1-217ENST00000541578 PNLIPP16233 465 aa6.14□□□□□ -1.43
SNHG1-217ENST00000541578 POU4F1Q01851 419 aa6.14□□□□□ -1.43
SNHG1-217ENST00000541578 PPP2R5DQ14738 602 aa6.14□□□□□ -1.43
SNHG1-217ENST00000541578 ZNF605Q86T29 641 aa6.14□□□□□ -1.43
SNHG1-217ENST00000541578 FAM169BQ8N8A8 192 aa6.14□□□□□ -1.43
SNHG1-217ENST00000541578 NAT16Q8N8M0 369 aa6.14□□□□□ -1.43
SNHG1-217ENST00000541578 KLHL25Q9H0H3 589 aa6.14□□□□□ -1.43
SNHG1-217ENST00000541578 ZNF552Q9H707 407 aaPredicted RBP6.14□□□□□ -1.43
SNHG1-217ENST00000541578 TMA7Q9Y2S6 64 aaKnown RBP6.14□□□□□ -1.43
SNHG1-217ENST00000541578 OR14I1A6ND48 311 aa6.13□□□□□ -1.43
SNHG1-217ENST00000541578 EPHX1P07099 455 aa6.13□□□□□ -1.43
SNHG1-217ENST00000541578 HSF5Q4G112 596 aaPredicted RBP6.13□□□□□ -1.43
SNHG1-217ENST00000541578 ADGRF1Q5T601 910 aa6.13□□□□□ -1.43
SNHG1-217ENST00000541578 HLA-DQA1Q5Y7H0 255 aa6.13□□□□□ -1.43
SNHG1-217ENST00000541578 KIAA1211LQ6NV74 962 aa6.13□□□□□ -1.43
SNHG1-217ENST00000541578 NOP9Q86U38 636 aaKnown RBP6.13□□□□□ -1.43
SNHG1-217ENST00000541578 SLCO6A1Q86UG4 719 aa6.13□□□□□ -1.43
SNHG1-217ENST00000541578 ANKLE2Q86XL3 938 aa6.13□□□□□ -1.43
SNHG1-217ENST00000541578 TMEM52Q8NDY8 209 aa6.13□□□□□ -1.43
SNHG1-217ENST00000541578 ADCY4Q8NFM4 1077 aa6.13□□□□□ -1.43
SNHG1-217ENST00000541578 KLHL6Q8WZ60 621 aa6.13□□□□□ -1.43
SNHG1-217ENST00000541578 FCRL3Q96P31 734 aaPredicted RBP6.13□□□□□ -1.43
SNHG1-217ENST00000541578 PLCD4Q9BRC7 762 aa6.13□□□□□ -1.43
SNHG1-217ENST00000541578 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.13□□□□□ -1.431e-17■■■□□ 16.6
SNHG1-217ENST00000541578 NACADO15069 1562 aa6.12□□□□□ -1.43
SNHG1-217ENST00000541578 PEX10O60683 326 aa6.12□□□□□ -1.43
SNHG1-217ENST00000541578 SSBP05455 408 aaKnown RBP eCLIP6.12□□□□□ -1.43
SNHG1-217ENST00000541578 CD3EP07766 207 aa6.12□□□□□ -1.43
SNHG1-217ENST00000541578 C1QTNF9P0C862 333 aa6.12□□□□□ -1.43
SNHG1-217ENST00000541578 PRKCAP17252 672 aa6.12□□□□□ -1.43
SNHG1-217ENST00000541578 ARL4AP40617 200 aa6.12□□□□□ -1.43
SNHG1-217ENST00000541578 JAG1P78504 1218 aa6.12□□□□□ -1.43
SNHG1-217ENST00000541578 LAPTM5Q13571 262 aa6.12□□□□□ -1.43
SNHG1-217ENST00000541578 TMEM132EQ6IEE7 984 aa6.12□□□□□ -1.43
SNHG1-217ENST00000541578 VHLLQ6RSH7 139 aa6.12□□□□□ -1.43
SNHG1-217ENST00000541578 JAMLQ86YT9 394 aa6.12□□□□□ -1.43
SNHG1-217ENST00000541578 FGD4Q96M96 766 aa6.12□□□□□ -1.43
SNHG1-217ENST00000541578 LNPKQ9C0E8 428 aa6.12□□□□□ -1.43
SNHG1-217ENST00000541578 ANKRD34BA5PLL1 514 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms