RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 L2HGDHQ9H9P8 463 aa16.89■□□□□ 0.3
VARS2-211ENST00000541562 PCDHA6Q9UN73 950 aa16.89■□□□□ 0.3
VARS2-211ENST00000541562 PCDHA8Q9Y5H6 950 aa16.89■□□□□ 0.3
VARS2-211ENST00000541562 KIF2AO00139 706 aaPredicted RBP16.89■□□□□ 0.29
VARS2-211ENST00000541562 SOGA3Q5TF21 947 aa16.89■□□□□ 0.29
VARS2-211ENST00000541562 TMC4Q7Z404 712 aa16.89■□□□□ 0.29
VARS2-211ENST00000541562 NUDT12Q9BQG2 462 aa16.89■□□□□ 0.29
VARS2-211ENST00000541562 BRIP1Q9BX63 1249 aa16.89■□□□□ 0.29
VARS2-211ENST00000541562 NLRC4Q9NPP4 1024 aa16.89■□□□□ 0.29
VARS2-211ENST00000541562 RBM28Q9NW13 759 aaKnown RBP16.89■□□□□ 0.29
VARS2-211ENST00000541562 BCS1LQ9Y276 419 aa16.89■□□□□ 0.29
VARS2-211ENST00000541562 TBX2Q13207 712 aaPredicted RBP16.89■□□□□ 0.29
VARS2-211ENST00000541562 TERF2Q15554 542 aa16.89■□□□□ 0.29
VARS2-211ENST00000541562 CAGE1Q8TC20 777 aa16.89■□□□□ 0.29
VARS2-211ENST00000541562 MAGEC2Q9UBF1 373 aaPredicted RBP16.89■□□□□ 0.29
VARS2-211ENST00000541562 TBC1D8BQ0IIM8 1120 aa16.88■□□□□ 0.29
VARS2-211ENST00000541562 SYCP1Q15431 976 aa16.88■□□□□ 0.29
VARS2-211ENST00000541562 TCP11X2Q5H9J9 407 aa16.88■□□□□ 0.29
VARS2-211ENST00000541562 TRAPPC3LQ5T215 181 aa16.88■□□□□ 0.29
VARS2-211ENST00000541562 DPP8Q6V1X1 898 aaPredicted RBP16.88■□□□□ 0.29
VARS2-211ENST00000541562 APTXQ7Z2E3 356 aaKnown RBP16.88■□□□□ 0.29
VARS2-211ENST00000541562 ANKRD20A12PQ8NF67 263 aa16.88■□□□□ 0.29
VARS2-211ENST00000541562 MAD2L2Q9UI95 211 aa16.88■□□□□ 0.29
VARS2-211ENST00000541562 LMAN1P49257 510 aa16.88■□□□□ 0.29
VARS2-211ENST00000541562 TSR1Q2NL82 804 aaKnown RBP16.88■□□□□ 0.29
VARS2-211ENST00000541562 CABP7Q86V35 215 aa16.88■□□□□ 0.29
VARS2-211ENST00000541562 JADE2Q9NQC1 790 aa16.88■□□□□ 0.29
VARS2-211ENST00000541562 CDK8P49336 464 aa16.88■□□□□ 0.29
VARS2-211ENST00000541562 CCDC122Q5T0U0 273 aa16.88■□□□□ 0.29
VARS2-211ENST00000541562 C12orf60Q5U649 245 aa16.88■□□□□ 0.29
VARS2-211ENST00000541562 RIN2Q8WYP3 895 aaPredicted RBP16.88■□□□□ 0.29
VARS2-211ENST00000541562 ZNF622Q969S3 477 aaKnown RBP eCLIP16.88■□□□□ 0.29
VARS2-211ENST00000541562 MORC2Q9Y6X9 1032 aaPredicted RBP16.88■□□□□ 0.29
VARS2-211ENST00000541562 NPHP3-ACAD11A0A0J9YXS1 232 aa16.87■□□□□ 0.29
VARS2-211ENST00000541562 PDXDC2PQ6P474 469 aa16.87■□□□□ 0.29
VARS2-211ENST00000541562 FERMT2Q96AC1 680 aa16.87■□□□□ 0.29
VARS2-211ENST00000541562 CDK5RAP3Q96JB5 506 aa16.87■□□□□ 0.29
VARS2-211ENST00000541562 PDE11AQ9HCR9 933 aa16.87■□□□□ 0.29
VARS2-211ENST00000541562 LAMB4A4D0S4 1761 aa16.87■□□□□ 0.29
VARS2-211ENST00000541562 SF3B3Q15393 1217 aaKnown RBP16.87■□□□□ 0.29
VARS2-211ENST00000541562 NAALADL2Q58DX5 795 aa16.87■□□□□ 0.29
VARS2-211ENST00000541562 DNAJC21Q5F1R6 531 aaKnown RBP16.87■□□□□ 0.29
VARS2-211ENST00000541562 SEC63Q9UGP8 760 aaKnown RBP16.87■□□□□ 0.29
VARS2-211ENST00000541562 PCDHA4Q9UN74 947 aa16.87■□□□□ 0.29
VARS2-211ENST00000541562 TBC1D10BQ4KMP7 808 aaPredicted RBP16.87■□□□□ 0.29
VARS2-211ENST00000541562 DISC1Q9NRI5 854 aa16.87■□□□□ 0.29
VARS2-211ENST00000541562 ABHD10Q9NUJ1 306 aa16.87■□□□□ 0.29
VARS2-211ENST00000541562 VPS18Q9P253 973 aa16.87■□□□□ 0.29
VARS2-211ENST00000541562 ITGB4P16144 1822 aa16.86■□□□□ 0.29
VARS2-211ENST00000541562 ANKRD40Q6AI12 368 aa16.86■□□□□ 0.29
VARS2-211ENST00000541562 TNFRSF25Q93038 417 aa16.86■□□□□ 0.29
VARS2-211ENST00000541562 KIFC2Q96AC6 838 aa16.86■□□□□ 0.29
VARS2-211ENST00000541562 GSDMAQ96QA5 445 aa16.86■□□□□ 0.29
VARS2-211ENST00000541562 ARFGAP3Q9NP61 516 aa16.86■□□□□ 0.29
VARS2-211ENST00000541562 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.86■□□□□ 0.29
VARS2-211ENST00000541562 MRFAP1Q9Y605 127 aa16.86■□□□□ 0.29
VARS2-211ENST00000541562 MYH7P12883 1935 aa16.86■□□□□ 0.29
VARS2-211ENST00000541562 PARP4Q9UKK3 1724 aaKnown RBP16.86■□□□□ 0.29
VARS2-211ENST00000541562 SMARCC1Q92922 1105 aaPredicted RBP16.86■□□□□ 0.29
VARS2-211ENST00000541562 TCP11L1Q9NUJ3 509 aa16.86■□□□□ 0.29
VARS2-211ENST00000541562 ATRNO75882 1429 aa16.86■□□□□ 0.29
VARS2-211ENST00000541562 CTAGE9A4FU28 777 aa16.86■□□□□ 0.29
VARS2-211ENST00000541562 CALM1P0DP23 149 aa16.86■□□□□ 0.29
VARS2-211ENST00000541562 CALM2P0DP24 149 aa16.86■□□□□ 0.29
VARS2-211ENST00000541562 CALM3P0DP25 149 aa16.86■□□□□ 0.29
VARS2-211ENST00000541562 RASA1P20936 1047 aa16.86■□□□□ 0.29
VARS2-211ENST00000541562 USH1GQ495M9 461 aa16.86■□□□□ 0.29
VARS2-211ENST00000541562 BCAS3Q9H6U6 928 aa16.86■□□□□ 0.29
VARS2-211ENST00000541562 EXOC1Q9NV70 894 aa16.86■□□□□ 0.29
VARS2-211ENST00000541562 LUC7L2Q9Y383 392 aaKnown RBP16.86■□□□□ 0.29
VARS2-211ENST00000541562 USP17L15C9J2P7 530 aa16.85■□□□□ 0.29
VARS2-211ENST00000541562 USP17L13C9JLJ4 530 aa16.85■□□□□ 0.29
VARS2-211ENST00000541562 USP17L11C9JVI0 530 aa16.85■□□□□ 0.29
VARS2-211ENST00000541562 USP17L18D6R9N7 530 aa16.85■□□□□ 0.29
VARS2-211ENST00000541562 USP17L22D6RA61 530 aa16.85■□□□□ 0.29
VARS2-211ENST00000541562 USP17L17D6RBQ6 530 aa16.85■□□□□ 0.29
VARS2-211ENST00000541562 USP17L19D6RCP7 530 aa16.85■□□□□ 0.29
VARS2-211ENST00000541562 USP17L20D6RJB6 530 aa16.85■□□□□ 0.29
VARS2-211ENST00000541562 MEIS1O00470 390 aa16.85■□□□□ 0.29
VARS2-211ENST00000541562 MYO1BO43795 1136 aa16.85■□□□□ 0.29
VARS2-211ENST00000541562 BAG3O95817 575 aa16.85■□□□□ 0.29
VARS2-211ENST00000541562 H2AFXP16104 143 aaPredicted RBP16.85■□□□□ 0.29
VARS2-211ENST00000541562 USP17L24Q0WX57 530 aa16.85■□□□□ 0.29
VARS2-211ENST00000541562 SMC1AQ14683 1233 aaKnown RBP16.85■□□□□ 0.29
VARS2-211ENST00000541562 E2F4Q16254 413 aa16.85■□□□□ 0.29
VARS2-211ENST00000541562 USP17L6PQ6QN14 398 aa16.85■□□□□ 0.29
VARS2-211ENST00000541562 LACRTQ9GZZ8 138 aa16.85■□□□□ 0.29
VARS2-211ENST00000541562 ATP8A2Q9NTI2 1148 aa16.85■□□□□ 0.29
VARS2-211ENST00000541562 ARPP21Q9UBL0 812 aaPredicted RBP16.85■□□□□ 0.29
VARS2-211ENST00000541562 NARFQ9UHQ1 456 aa16.85■□□□□ 0.29
VARS2-211ENST00000541562 USP21Q9UK80 565 aa16.85■□□□□ 0.29
VARS2-211ENST00000541562 RCCD1A6NED2 376 aa16.85■□□□□ 0.29
VARS2-211ENST00000541562 CCP110O43303 1012 aa16.85■□□□□ 0.29
VARS2-211ENST00000541562 BUB1O43683 1085 aa16.85■□□□□ 0.29
VARS2-211ENST00000541562 ERCC5P28715 1186 aaPredicted RBP16.85■□□□□ 0.29
VARS2-211ENST00000541562 TTC19Q6DKK2 380 aaPredicted RBP16.85■□□□□ 0.29
VARS2-211ENST00000541562 IRF2BP1Q8IU81 584 aa16.85■□□□□ 0.29
VARS2-211ENST00000541562 KIAA0825Q8IV33 1275 aa16.85■□□□□ 0.29
VARS2-211ENST00000541562 SPICE1Q8N0Z3 855 aa16.85■□□□□ 0.29
VARS2-211ENST00000541562 GOLGA1Q92805 767 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms