RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 CABYRO75952 493 aa14.63□□□□□ -0.07
SNHG1-216ENST00000541416 RASA1P20936 1047 aa14.63□□□□□ -0.07
SNHG1-216ENST00000541416 LRRFIP1Q32MZ4 808 aaKnown RBP14.63□□□□□ -0.07
SNHG1-216ENST00000541416 TMEM240Q5SV17 173 aa14.63□□□□□ -0.07
SNHG1-216ENST00000541416 AKNAD1Q5T1N1 836 aa14.63□□□□□ -0.07
SNHG1-216ENST00000541416 NOL8Q76FK4 1167 aaKnown RBP14.63□□□□□ -0.07
SNHG1-216ENST00000541416 ARMCX2Q7L311 632 aa14.63□□□□□ -0.07
SNHG1-216ENST00000541416 STRBPQ96SI9 672 aaKnown RBP14.63□□□□□ -0.07
SNHG1-216ENST00000541416 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.63□□□□□ -0.07
SNHG1-216ENST00000541416 UPF3AQ9H1J1 476 aaKnown RBP14.63□□□□□ -0.07
SNHG1-216ENST00000541416 TSPYL2Q9H2G4 693 aaPredicted RBP14.63□□□□□ -0.07
SNHG1-216ENST00000541416 ZEB2O60315 1214 aa14.62□□□□□ -0.07
SNHG1-216ENST00000541416 TTLL1O95922 423 aa14.62□□□□□ -0.07
SNHG1-216ENST00000541416 ZFYP08048 801 aaPredicted RBP14.62□□□□□ -0.07
SNHG1-216ENST00000541416 CSF2RAP15509 400 aa14.62□□□□□ -0.07
SNHG1-216ENST00000541416 TDO2P48775 406 aa14.62□□□□□ -0.07
SNHG1-216ENST00000541416 PPP4R3BQ5MIZ7 849 aa14.62□□□□□ -0.07
SNHG1-216ENST00000541416 PBX4Q9BYU1 374 aa14.62□□□□□ -0.07
SNHG1-216ENST00000541416 PPP1R12CQ9BZL4 782 aa14.62□□□□□ -0.07
SNHG1-216ENST00000541416 RAVER2Q9HCJ3 691 aaKnown RBP14.62□□□□□ -0.07
SNHG1-216ENST00000541416 THEGQ9P2T0 379 aa14.62□□□□□ -0.07
SNHG1-216ENST00000541416 ISY1Q9ULR0 285 aaKnown RBP14.62□□□□□ -0.07
SNHG1-216ENST00000541416 GREB1LQ9C091 1923 aaPredicted RBP14.62□□□□□ -0.07
SNHG1-216ENST00000541416 MYH4Q9Y623 1939 aa14.61□□□□□ -0.07
SNHG1-216ENST00000541416 MYADML2A6NDP7 307 aa14.61□□□□□ -0.07
SNHG1-216ENST00000541416 ASB14A6NK59 587 aa14.61□□□□□ -0.07
SNHG1-216ENST00000541416 APPP05067 770 aa14.61□□□□□ -0.07
SNHG1-216ENST00000541416 SLC3A2P08195 630 aaKnown RBP14.61□□□□□ -0.07
SNHG1-216ENST00000541416 TNFAIP2Q03169 654 aa14.61□□□□□ -0.07
SNHG1-216ENST00000541416 SIRT2Q8IXJ6 389 aa14.61□□□□□ -0.07
SNHG1-216ENST00000541416 FAM126BQ8IXS8 530 aa14.61□□□□□ -0.07
SNHG1-216ENST00000541416 CCDC144CPQ8IYA2 1237 aa14.61□□□□□ -0.07
SNHG1-216ENST00000541416 STK11IPQ8N1F8 1099 aa14.61□□□□□ -0.07
SNHG1-216ENST00000541416 USP38Q8NB14 1042 aa14.61□□□□□ -0.07
SNHG1-216ENST00000541416 GMCL1P1Q8NEA9 526 aa14.61□□□□□ -0.07
SNHG1-216ENST00000541416 CHURC1Q8WUH1 139 aa14.61□□□□□ -0.07
SNHG1-216ENST00000541416 PPM1EQ8WY54 764 aa14.61□□□□□ -0.07
SNHG1-216ENST00000541416 APPBP2Q92624 585 aa14.61□□□□□ -0.07
SNHG1-216ENST00000541416 MKL1Q969V6 931 aa14.61□□□□□ -0.07
SNHG1-216ENST00000541416 AP5M1Q9H0R1 490 aa14.61□□□□□ -0.07
SNHG1-216ENST00000541416 ACAD9Q9H845 621 aa14.61□□□□□ -0.07
SNHG1-216ENST00000541416 SLC28A3Q9HAS3 691 aa14.61□□□□□ -0.07
SNHG1-216ENST00000541416 IL23AQ9NPF7 189 aa14.61□□□□□ -0.07
SNHG1-216ENST00000541416 ECHDC1Q9NTX5 307 aa14.61□□□□□ -0.07
SNHG1-216ENST00000541416 COG6Q9Y2V7 657 aa14.61□□□□□ -0.07
SNHG1-216ENST00000541416 CHD9Q3L8U1 2897 aa14.6□□□□□ -0.07
SNHG1-216ENST00000541416 GSG1L2A8MUP6 293 aa14.6□□□□□ -0.07
SNHG1-216ENST00000541416 FGBP02675 491 aa14.6□□□□□ -0.07
SNHG1-216ENST00000541416 TSPY3P0CV98 308 aa14.6□□□□□ -0.07
SNHG1-216ENST00000541416 TSPY8P0CW00 308 aa14.6□□□□□ -0.07
SNHG1-216ENST00000541416 BMP3P12645 472 aa14.6□□□□□ -0.07
SNHG1-216ENST00000541416 STAT2P52630 851 aa14.6□□□□□ -0.07
SNHG1-216ENST00000541416 NKX3-2P78367 333 aa14.6□□□□□ -0.07
SNHG1-216ENST00000541416 PDE4BQ07343 736 aa14.6□□□□□ -0.07
SNHG1-216ENST00000541416 IKQ13123 557 aaPredicted RBP14.6□□□□□ -0.07
SNHG1-216ENST00000541416 TKFCQ3LXA3 575 aa14.6□□□□□ -0.07
SNHG1-216ENST00000541416 RASIP1Q5U651 963 aa14.6□□□□□ -0.07
SNHG1-216ENST00000541416 ZNF365Q70YC5 407 aa14.6□□□□□ -0.07
SNHG1-216ENST00000541416 KBTBD3Q8NAB2 608 aa14.6□□□□□ -0.07
SNHG1-216ENST00000541416 NACAP1Q9BZK3 213 aa14.6□□□□□ -0.07
SNHG1-216ENST00000541416 HIPK3Q9H422 1215 aa14.6□□□□□ -0.07
SNHG1-216ENST00000541416 HOMER2Q9NSB8 354 aa14.6□□□□□ -0.07
SNHG1-216ENST00000541416 MTMR4Q9NYA4 1195 aa14.6□□□□□ -0.07
SNHG1-216ENST00000541416 IGKV6D-41A0A0C4DH26 115 aa14.59□□□□□ -0.07
SNHG1-216ENST00000541416 ACRP10323 421 aa14.59□□□□□ -0.07
SNHG1-216ENST00000541416 IGFBP4P22692 258 aa14.59□□□□□ -0.07
SNHG1-216ENST00000541416 MRPS5P82675 430 aaKnown RBP14.59□□□□□ -0.07
SNHG1-216ENST00000541416 SLFN13Q68D06 897 aa14.59□□□□□ -0.07
SNHG1-216ENST00000541416 C16orf59Q7L2K0 433 aa14.59□□□□□ -0.07
SNHG1-216ENST00000541416 FAM160B2Q86V87 743 aa14.59□□□□□ -0.07
SNHG1-216ENST00000541416 RPUSD2Q8IZ73 545 aaKnown RBP14.59□□□□□ -0.07
SNHG1-216ENST00000541416 HERVK_113Q902F9 699 aa14.59□□□□□ -0.07
SNHG1-216ENST00000541416 CEP95Q96GE4 821 aa14.59□□□□□ -0.07
SNHG1-216ENST00000541416 ASB2Q96Q27 587 aa14.59□□□□□ -0.07
SNHG1-216ENST00000541416 PRDM12Q9H4Q4 367 aa14.59□□□□□ -0.07
SNHG1-216ENST00000541416 MCM3APO60318 1980 aa14.58□□□□□ -0.07
SNHG1-216ENST00000541416 CD4P01730 458 aa14.58□□□□□ -0.08
SNHG1-216ENST00000541416 CHGBP05060 677 aa14.58□□□□□ -0.08
SNHG1-216ENST00000541416 CYP2C18P33260 490 aa14.58□□□□□ -0.08
SNHG1-216ENST00000541416 PBX2P40425 430 aa14.58□□□□□ -0.08
SNHG1-216ENST00000541416 ITGA7Q13683 1181 aa14.58□□□□□ -0.08
SNHG1-216ENST00000541416 FSCN1Q16658 493 aaKnown RBP14.58□□□□□ -0.08
SNHG1-216ENST00000541416 TLK2Q86UE8 772 aa14.58□□□□□ -0.08
SNHG1-216ENST00000541416 LRRC47Q8N1G4 583 aaKnown RBP14.58□□□□□ -0.08
SNHG1-216ENST00000541416 TTC28Q96AY4 2481 aa14.58□□□□□ -0.08
SNHG1-216ENST00000541416 GRXCR1A8MXD5 290 aa14.57□□□□□ -0.08
SNHG1-216ENST00000541416 PATL2C9JE40 543 aaKnown RBP14.57□□□□□ -0.08
SNHG1-216ENST00000541416 TMEM232C9JQI7 657 aa14.57□□□□□ -0.08
SNHG1-216ENST00000541416 RNF113AO15541 343 aaKnown RBP14.57□□□□□ -0.08
SNHG1-216ENST00000541416 GPAA1O43292 621 aa14.57□□□□□ -0.08
SNHG1-216ENST00000541416 ADCY6O43306 1168 aa14.57□□□□□ -0.08
SNHG1-216ENST00000541416 PRDM1O75626 825 aa14.57□□□□□ -0.08
SNHG1-216ENST00000541416 COL9A1P20849 921 aa14.57□□□□□ -0.08
SNHG1-216ENST00000541416 SLC1A4P43007 532 aa14.57□□□□□ -0.08
SNHG1-216ENST00000541416 FAM133AQ8N9E0 248 aa14.57□□□□□ -0.08
SNHG1-216ENST00000541416 GMCL1Q96IK5 515 aa14.57□□□□□ -0.08
SNHG1-216ENST00000541416 FGD4Q96M96 766 aa14.57□□□□□ -0.08
SNHG1-216ENST00000541416 RNF146Q9NTX7 359 aa14.57□□□□□ -0.08
SNHG1-216ENST00000541416 SLC4A7Q9Y6M7 1214 aa14.57□□□□□ -0.08
SNHG1-216ENST00000541416 CHD7Q9P2D1 2997 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms