RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 NOP53Q9NZM5 478 aaKnown RBP16.41■□□□□ 0.22
SMARCA4-207ENST00000541122 TARBP1Q13395 1621 aaKnown RBP16.41■□□□□ 0.22
SMARCA4-207ENST00000541122 BTBD18B2RXH4 712 aa16.4■□□□□ 0.22
SMARCA4-207ENST00000541122 CTNND1O60716 968 aaKnown RBP16.4■□□□□ 0.22
SMARCA4-207ENST00000541122 PFDN1O60925 122 aa16.4■□□□□ 0.22
SMARCA4-207ENST00000541122 BAG2O95816 211 aa16.4■□□□□ 0.22
SMARCA4-207ENST00000541122 ADD1P35611 737 aaKnown RBP16.4■□□□□ 0.22
SMARCA4-207ENST00000541122 COG7P83436 770 aa16.4■□□□□ 0.22
SMARCA4-207ENST00000541122 PPARAQ07869 468 aa16.4■□□□□ 0.22
SMARCA4-207ENST00000541122 TAF11Q15544 211 aa16.4■□□□□ 0.22
SMARCA4-207ENST00000541122 EPSTI1Q96J88 318 aa16.4■□□□□ 0.22
SMARCA4-207ENST00000541122 IWS1Q96ST2 819 aa16.4■□□□□ 0.22
SMARCA4-207ENST00000541122 MAN1B1Q9UKM7 699 aa16.4■□□□□ 0.22
SMARCA4-207ENST00000541122 DDAH1O94760 285 aa16.4■□□□□ 0.22
SMARCA4-207ENST00000541122 POLR2FP61218 127 aaKnown RBP16.4■□□□□ 0.22
SMARCA4-207ENST00000541122 ZBTB17Q13105 803 aa16.4■□□□□ 0.22
SMARCA4-207ENST00000541122 TEX11Q8IYF3 940 aa16.4■□□□□ 0.22
SMARCA4-207ENST00000541122 MYCT1Q8N699 235 aa16.4■□□□□ 0.22
SMARCA4-207ENST00000541122 OR52Z1P0C646 297 aa16.4■□□□□ 0.22
SMARCA4-207ENST00000541122 RFC4P35249 363 aa16.4■□□□□ 0.22
SMARCA4-207ENST00000541122 ZBED6P86452 979 aa16.4■□□□□ 0.22
SMARCA4-207ENST00000541122 CADPS2Q86UW7 1296 aa16.4■□□□□ 0.22
SMARCA4-207ENST00000541122 PSMD1Q99460 953 aa16.4■□□□□ 0.22
SMARCA4-207ENST00000541122 RWDD2AQ9UIY3 292 aa16.4■□□□□ 0.22
SMARCA4-207ENST00000541122 C10orf76Q5T2E6 689 aa16.4■□□□□ 0.22
SMARCA4-207ENST00000541122 ANKRD35Q8N283 1001 aa16.4■□□□□ 0.22
SMARCA4-207ENST00000541122 CRCPO75575 148 aa16.39■□□□□ 0.22
SMARCA4-207ENST00000541122 SLFN14P0C7P3 912 aa16.39■□□□□ 0.22
SMARCA4-207ENST00000541122 PCP11498 1178 aaKnown RBP16.39■□□□□ 0.22
SMARCA4-207ENST00000541122 SESN3P58005 492 aa16.39■□□□□ 0.22
SMARCA4-207ENST00000541122 CUL1Q13616 776 aa16.39■□□□□ 0.22
SMARCA4-207ENST00000541122 SUDS3Q9H7L9 328 aaPredicted RBP16.39■□□□□ 0.22
SMARCA4-207ENST00000541122 SH3TC1Q8TE82 1336 aa16.39■□□□□ 0.21
SMARCA4-207ENST00000541122 IL2RBP14784 551 aa16.39■□□□□ 0.21
SMARCA4-207ENST00000541122 KIF23Q02241 960 aaPredicted RBP16.39■□□□□ 0.21
SMARCA4-207ENST00000541122 FAM212AQ96EL1 285 aa16.39■□□□□ 0.21
SMARCA4-207ENST00000541122 TSPYL2Q9H2G4 693 aaPredicted RBP16.39■□□□□ 0.21
SMARCA4-207ENST00000541122 KCNG1Q9UIX4 513 aa16.39■□□□□ 0.21
SMARCA4-207ENST00000541122 DAAM1Q9Y4D1 1078 aa16.39■□□□□ 0.21
SMARCA4-207ENST00000541122 SOWAHDA6NJG2 315 aa16.39■□□□□ 0.21
SMARCA4-207ENST00000541122 NDUFA10O95299 355 aa16.39■□□□□ 0.21
SMARCA4-207ENST00000541122 RASSF7Q02833 373 aa16.39■□□□□ 0.21
SMARCA4-207ENST00000541122 LMNB2Q03252 620 aa16.39■□□□□ 0.21
SMARCA4-207ENST00000541122 PSMD6Q15008 389 aa16.39■□□□□ 0.21
SMARCA4-207ENST00000541122 TRIM42Q8IWZ5 723 aa16.39■□□□□ 0.21
SMARCA4-207ENST00000541122 GSDMBQ8TAX9 411 aa16.39■□□□□ 0.21
SMARCA4-207ENST00000541122 SH2D4AQ9H788 454 aa16.39■□□□□ 0.21
SMARCA4-207ENST00000541122 GPCPD1Q9NPB8 672 aa16.39■□□□□ 0.21
SMARCA4-207ENST00000541122 ARPP21Q9UBL0 812 aaPredicted RBP16.39■□□□□ 0.21
SMARCA4-207ENST00000541122 PRDM1O75626 825 aa16.39■□□□□ 0.21
SMARCA4-207ENST00000541122 LMNB1P20700 586 aa16.39■□□□□ 0.21
SMARCA4-207ENST00000541122 ZNF658Q5TYW1 1059 aaPredicted RBP16.39■□□□□ 0.21
SMARCA4-207ENST00000541122 HIBCHQ6NVY1 386 aaPredicted RBP16.39■□□□□ 0.21
SMARCA4-207ENST00000541122 FAM89AQ96GI7 184 aa16.39■□□□□ 0.21
SMARCA4-207ENST00000541122 TBC1D7Q9P0N9 293 aa16.39■□□□□ 0.21
SMARCA4-207ENST00000541122 USTQ9Y2C2 406 aa16.39■□□□□ 0.21
SMARCA4-207ENST00000541122 NDUFB9Q9Y6M9 179 aa16.39■□□□□ 0.21
SMARCA4-207ENST00000541122 C2orf54Q08AI8 447 aa16.38■□□□□ 0.21
SMARCA4-207ENST00000541122 GEN1Q17RS7 908 aa16.38■□□□□ 0.21
SMARCA4-207ENST00000541122 TPTE2Q6XPS3 522 aa16.38■□□□□ 0.21
SMARCA4-207ENST00000541122 ZNF594Q96JF6 807 aaPredicted RBP16.38■□□□□ 0.21
SMARCA4-207ENST00000541122 ZSCAN10Q96SZ4 725 aaPredicted RBP16.38■□□□□ 0.21
SMARCA4-207ENST00000541122 GPR108Q9NPR9 543 aa16.38■□□□□ 0.21
SMARCA4-207ENST00000541122 RAB20Q9NX57 234 aa16.38■□□□□ 0.21
SMARCA4-207ENST00000541122 ZNF354CQ86Y25 554 aa16.38■□□□□ 0.21
SMARCA4-207ENST00000541122 ABCB4P21439 1286 aa16.38■□□□□ 0.21
SMARCA4-207ENST00000541122 PDE1CQ14123 709 aaPredicted RBP16.38■□□□□ 0.21
SMARCA4-207ENST00000541122 LRRC23Q53EV4 343 aaPredicted RBP16.38■□□□□ 0.21
SMARCA4-207ENST00000541122 DPH6Q7L8W6 267 aa16.38■□□□□ 0.21
SMARCA4-207ENST00000541122 ACRBPQ8NEB7 543 aa16.38■□□□□ 0.21
SMARCA4-207ENST00000541122 EDC3Q96F86 508 aaKnown RBP16.38■□□□□ 0.21
SMARCA4-207ENST00000541122 ATP8A2Q9NTI2 1148 aa16.38■□□□□ 0.21
SMARCA4-207ENST00000541122 SCG2P13521 617 aa16.38■□□□□ 0.21
SMARCA4-207ENST00000541122 ARHGAP44Q17R89 818 aa16.38■□□□□ 0.21
SMARCA4-207ENST00000541122 THAP9Q9H5L6 903 aa16.38■□□□□ 0.21
SMARCA4-207ENST00000541122 ABCC12Q96J65 1359 aa16.38■□□□□ 0.21
SMARCA4-207ENST00000541122 PTCH1Q13635 1447 aa16.38■□□□□ 0.21
SMARCA4-207ENST00000541122 GOLGA8FQ08AF8 430 aa16.37■□□□□ 0.21
SMARCA4-207ENST00000541122 GOLGA8DPQ0D2H9 430 aa16.37■□□□□ 0.21
SMARCA4-207ENST00000541122 ARHGAP31Q2M1Z3 1444 aa16.37■□□□□ 0.21
SMARCA4-207ENST00000541122 HIBADHP31937 336 aaKnown RBP16.37■□□□□ 0.21
SMARCA4-207ENST00000541122 STRN3Q13033 797 aa16.37■□□□□ 0.21
SMARCA4-207ENST00000541122 MAN2A1Q16706 1144 aa16.37■□□□□ 0.21
SMARCA4-207ENST00000541122 ARHGEF25Q86VW2 580 aa16.37■□□□□ 0.21
SMARCA4-207ENST00000541122 GPIHBP1Q8IV16 184 aa16.37■□□□□ 0.21
SMARCA4-207ENST00000541122 COPRSQ9NQ92 184 aa16.37■□□□□ 0.21
SMARCA4-207ENST00000541122 MFAP3LO75121 409 aa16.37■□□□□ 0.21
SMARCA4-207ENST00000541122 FMNL1O95466 1100 aaPredicted RBP16.37■□□□□ 0.21
SMARCA4-207ENST00000541122 GCP02774 474 aa16.37■□□□□ 0.21
SMARCA4-207ENST00000541122 IRX5P78411 483 aaPredicted RBP16.37■□□□□ 0.21
SMARCA4-207ENST00000541122 UNC5CLQ8IV45 518 aa16.37■□□□□ 0.21
SMARCA4-207ENST00000541122 AK8Q96MA6 479 aa16.37■□□□□ 0.21
SMARCA4-207ENST00000541122 SLC52A2Q9HAB3 445 aa16.37■□□□□ 0.21
SMARCA4-207ENST00000541122 PCDHB13Q9Y5F0 798 aa16.37■□□□□ 0.21
SMARCA4-207ENST00000541122 ANO9A1A5B4 782 aa16.37■□□□□ 0.21
SMARCA4-207ENST00000541122 PPFIA2O75334 1257 aa16.37■□□□□ 0.21
SMARCA4-207ENST00000541122 LMNAP02545 664 aaKnown RBP16.37■□□□□ 0.21
SMARCA4-207ENST00000541122 PTGDRQ13258 359 aa16.37■□□□□ 0.21
SMARCA4-207ENST00000541122 ZMYM1Q5SVZ6 1142 aa16.37■□□□□ 0.21
SMARCA4-207ENST00000541122 GPBP1Q86WP2 473 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms