RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 MB21D2Q8IYB1 491 aaPredicted RBP15.37■□□□□ 0.05
LTBR-208ENST00000541005 CPXCR1Q8N123 301 aa15.37■□□□□ 0.05
LTBR-208ENST00000541005 U2AF1L4Q8WU68 220 aaKnown RBP15.37■□□□□ 0.05
LTBR-208ENST00000541005 KAT14Q9H8E8 782 aa15.37■□□□□ 0.05
LTBR-208ENST00000541005 HMX1Q9NP08 348 aaPredicted RBP15.37■□□□□ 0.05
LTBR-208ENST00000541005 FBXO40Q9UH90 709 aa15.37■□□□□ 0.05
LTBR-208ENST00000541005 MTMR7Q9Y216 660 aa15.37■□□□□ 0.05
LTBR-208ENST00000541005 FRMPD2Q68DX3 1309 aaPredicted RBP15.37■□□□□ 0.05
LTBR-208ENST00000541005 SLC27A2O14975 620 aa15.36■□□□□ 0.05
LTBR-208ENST00000541005 SGPL1O95470 568 aa15.36■□□□□ 0.05
LTBR-208ENST00000541005 CACNB2Q08289 660 aaPredicted RBP15.36■□□□□ 0.05
LTBR-208ENST00000541005 ZNF792Q3KQV3 632 aa15.36■□□□□ 0.05
LTBR-208ENST00000541005 ASPRV1Q53RT3 343 aa15.36■□□□□ 0.05
LTBR-208ENST00000541005 IFIT1BQ5T764 474 aaKnown RBP15.36■□□□□ 0.05
LTBR-208ENST00000541005 CREB3L3Q68CJ9 461 aa15.36■□□□□ 0.05
LTBR-208ENST00000541005 UBE2Q1Q7Z7E8 422 aa15.36■□□□□ 0.05
LTBR-208ENST00000541005 CHMP4CQ96CF2 233 aa15.36■□□□□ 0.05
LTBR-208ENST00000541005 MAML3Q96JK9 1138 aa15.36■□□□□ 0.05
LTBR-208ENST00000541005 MTA3Q9BTC8 594 aa15.36■□□□□ 0.05
LTBR-208ENST00000541005 MKI67P46013 3256 aaKnown RBP15.36■□□□□ 0.05
LTBR-208ENST00000541005 ICAM1P05362 532 aa15.35■□□□□ 0.05
LTBR-208ENST00000541005 SLC16A2P36021 539 aa15.35■□□□□ 0.05
LTBR-208ENST00000541005 ANTXR2P58335 489 aa15.35■□□□□ 0.05
LTBR-208ENST00000541005 DEFB118Q96PH6 123 aa15.35■□□□□ 0.05
LTBR-208ENST00000541005 GPCPD1Q9NPB8 672 aa15.35■□□□□ 0.05
LTBR-208ENST00000541005 PNMA2Q9UL42 364 aa15.35■□□□□ 0.05
LTBR-208ENST00000541005 WDR19Q8NEZ3 1342 aa15.35■□□□□ 0.05
LTBR-208ENST00000541005 CYBAP13498 195 aa15.34■□□□□ 0.05
LTBR-208ENST00000541005 SART3Q15020 963 aaKnown RBP15.34■□□□□ 0.05
LTBR-208ENST00000541005 RNF20Q5VTR2 975 aa15.34■□□□□ 0.05
LTBR-208ENST00000541005 MSL3Q8N5Y2 521 aaKnown RBP15.34■□□□□ 0.05
LTBR-208ENST00000541005 AGBL1Q96MI9 1066 aa15.34■□□□□ 0.05
LTBR-208ENST00000541005 ACAD9Q9H845 621 aa15.34■□□□□ 0.05
LTBR-208ENST00000541005 RNF146Q9NTX7 359 aa15.34■□□□□ 0.05
LTBR-208ENST00000541005 NRBP1Q9UHY1 535 aa15.34■□□□□ 0.05
LTBR-208ENST00000541005 IFIT3O14879 490 aaKnown RBP15.33■□□□□ 0.04
LTBR-208ENST00000541005 PGK2P07205 417 aa15.33■□□□□ 0.04
LTBR-208ENST00000541005 PARP1P09874 1014 aaKnown RBP15.33■□□□□ 0.04
LTBR-208ENST00000541005 CCND3P30281 292 aaPredicted RBP15.33■□□□□ 0.04
LTBR-208ENST00000541005 CYP2C19P33261 490 aa15.33■□□□□ 0.04
LTBR-208ENST00000541005 TSGA10IPQ3SY00 556 aa15.33■□□□□ 0.04
LTBR-208ENST00000541005 CCDC174Q6PII3 467 aa15.33■□□□□ 0.04
LTBR-208ENST00000541005 ZNF467Q7Z7K2 595 aaPredicted RBP15.33■□□□□ 0.04
LTBR-208ENST00000541005 ANKLE1Q8NAG6 615 aa15.33■□□□□ 0.04
LTBR-208ENST00000541005 IGDCC4Q8TDY8 1250 aa15.33■□□□□ 0.04
LTBR-208ENST00000541005 OGDHLQ9ULD0 1010 aa15.33■□□□□ 0.04
LTBR-208ENST00000541005 CCPG1Q9ULG6 757 aa15.33■□□□□ 0.04
LTBR-208ENST00000541005 PFASO15067 1338 aa15.33■□□□□ 0.04
LTBR-208ENST00000541005 ERICH2A1L162 156 aa15.32■□□□□ 0.04
LTBR-208ENST00000541005 MSCO60682 206 aa15.32■□□□□ 0.04
LTBR-208ENST00000541005 GOLGA8HP0CJ92 632 aa15.32■□□□□ 0.04
LTBR-208ENST00000541005 MCM5P33992 734 aa15.32■□□□□ 0.04
LTBR-208ENST00000541005 SNAP25P60880 206 aa15.32■□□□□ 0.04
LTBR-208ENST00000541005 WTAPQ15007 396 aa15.32■□□□□ 0.04
LTBR-208ENST00000541005 MAMDC4Q6UXC1 1216 aa15.32■□□□□ 0.04
LTBR-208ENST00000541005 TRPV1Q8NER1 839 aa15.32■□□□□ 0.04
LTBR-208ENST00000541005 DDX11Q96FC9 970 aa15.32■□□□□ 0.04
LTBR-208ENST00000541005 FGD4Q96M96 766 aa15.32■□□□□ 0.04
LTBR-208ENST00000541005 TRERF1Q96PN7 1200 aa15.32■□□□□ 0.04
LTBR-208ENST00000541005 TINF2Q9BSI4 451 aa15.32■□□□□ 0.04
LTBR-208ENST00000541005 A1CFQ9NQ94 594 aaKnown RBP15.32■□□□□ 0.04
LTBR-208ENST00000541005 HOMER2Q9NSB8 354 aa15.32■□□□□ 0.04
LTBR-208ENST00000541005 SYNGAP1Q96PV0 1343 aa15.32■□□□□ 0.04
LTBR-208ENST00000541005 KIAA1217Q5T5P2 1943 aa15.31■□□□□ 0.04
LTBR-208ENST00000541005 PALM3A6NDB9 673 aaPredicted RBP15.31■□□□□ 0.04
LTBR-208ENST00000541005 FARP2O94887 1054 aaPredicted RBP15.31■□□□□ 0.04
LTBR-208ENST00000541005 ALAS1P13196 640 aa15.31■□□□□ 0.04
LTBR-208ENST00000541005 TROAPQ12815 778 aa15.31■□□□□ 0.04
LTBR-208ENST00000541005 GRM4Q14833 912 aa15.31■□□□□ 0.04
LTBR-208ENST00000541005 TMEM67Q5HYA8 995 aa15.31■□□□□ 0.04
LTBR-208ENST00000541005 LHX8Q68G74 356 aa15.31■□□□□ 0.04
LTBR-208ENST00000541005 CHST3Q7LGC8 479 aa15.31■□□□□ 0.04
LTBR-208ENST00000541005 ANKRD35Q8N283 1001 aa15.31■□□□□ 0.04
LTBR-208ENST00000541005 FAM133AQ8N9E0 248 aa15.31■□□□□ 0.04
LTBR-208ENST00000541005 KCNB2Q92953 911 aa15.31■□□□□ 0.04
LTBR-208ENST00000541005 TMEM87BQ96K49 555 aa15.31■□□□□ 0.04
LTBR-208ENST00000541005 LY9Q9HBG7 655 aa15.31■□□□□ 0.04
LTBR-208ENST00000541005 SENP2Q9HC62 589 aa15.31■□□□□ 0.04
LTBR-208ENST00000541005 EPB41L2O43491 1005 aaKnown RBP15.3■□□□□ 0.04
LTBR-208ENST00000541005 PRC1O43663 620 aa15.3■□□□□ 0.04
LTBR-208ENST00000541005 REC8O95072 547 aa15.3■□□□□ 0.04
LTBR-208ENST00000541005 TFRCP02786 760 aaKnown RBP15.3■□□□□ 0.04
LTBR-208ENST00000541005 SLC4A3P48751 1232 aa15.3■□□□□ 0.04
LTBR-208ENST00000541005 COL9A3Q14050 684 aaPredicted RBP15.3■□□□□ 0.04
LTBR-208ENST00000541005 MUM1L1Q5H9M0 696 aa15.3■□□□□ 0.04
LTBR-208ENST00000541005 ADGRF4Q8IZF3 695 aa15.3■□□□□ 0.04
LTBR-208ENST00000541005 MAP3K14Q99558 947 aa15.3■□□□□ 0.04
LTBR-208ENST00000541005 DDX20Q9UHI6 824 aaKnown RBP15.3■□□□□ 0.04
LTBR-208ENST00000541005 MAD2L2Q9UI95 211 aa15.3■□□□□ 0.04
LTBR-208ENST00000541005 SH2B2O14492 632 aaPredicted RBP15.29■□□□□ 0.04
LTBR-208ENST00000541005 SEPT4O43236 478 aa15.29■□□□□ 0.04
LTBR-208ENST00000541005 DDAH1O94760 285 aa15.29■□□□□ 0.04
LTBR-208ENST00000541005 LIFRP42702 1097 aa15.29■□□□□ 0.04
LTBR-208ENST00000541005 MNX1P50219 401 aaPredicted RBP15.29■□□□□ 0.04
LTBR-208ENST00000541005 KRT32Q14532 448 aa15.29■□□□□ 0.04
LTBR-208ENST00000541005 CDC37Q16543 378 aaPredicted RBP15.29■□□□□ 0.04
LTBR-208ENST00000541005 CATIPQ7Z7H3 387 aa15.29■□□□□ 0.04
LTBR-208ENST00000541005 RASEFQ8IZ41 740 aa15.29■□□□□ 0.04
LTBR-208ENST00000541005 TMTC2Q8N394 836 aa15.29■□□□□ 0.04
LTBR-208ENST00000541005 STAG2Q8N3U4 1231 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms