RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 LRWD1Q9UFC0 647 aa11.62□□□□□ -0.55
CDC42SE1-207ENST00000540998 LRRC10BA6NIK2 292 aa11.62□□□□□ -0.55
CDC42SE1-207ENST00000540998 AGPSO00116 658 aa11.62□□□□□ -0.55
CDC42SE1-207ENST00000540998 USP17L8P0C7I0 530 aa11.62□□□□□ -0.55
CDC42SE1-207ENST00000540998 IDEP14735 1019 aa11.62□□□□□ -0.55
CDC42SE1-207ENST00000540998 CCDC155Q8N6L0 562 aa11.62□□□□□ -0.55
CDC42SE1-207ENST00000540998 DMGDHQ9UI17 866 aaKnown RBP11.62□□□□□ -0.55
CDC42SE1-207ENST00000540998 TIAM2Q8IVF5 1701 aa11.62□□□□□ -0.55
CDC42SE1-207ENST00000540998 BCL9LQ86UU0 1499 aa11.61□□□□□ -0.55
CDC42SE1-207ENST00000540998 USP17L3A6NCW0 530 aa11.61□□□□□ -0.55
CDC42SE1-207ENST00000540998 USP17L4A6NCW7 530 aa11.61□□□□□ -0.55
CDC42SE1-207ENST00000540998 LGALS16A8MUM7 142 aa11.61□□□□□ -0.55
CDC42SE1-207ENST00000540998 PRPF6O94906 941 aaKnown RBP11.61□□□□□ -0.55
CDC42SE1-207ENST00000540998 STK4Q13043 487 aa11.61□□□□□ -0.55
CDC42SE1-207ENST00000540998 USP17L1Q7RTZ2 530 aa11.61□□□□□ -0.55
CDC42SE1-207ENST00000540998 ADSSL1Q8N142 457 aa11.61□□□□□ -0.55
CDC42SE1-207ENST00000540998 C4orf32Q8N8J7 132 aa11.61□□□□□ -0.55
CDC42SE1-207ENST00000540998 SELENOOQ9BVL4 669 aa11.61□□□□□ -0.55
CDC42SE1-207ENST00000540998 NHEJ1Q9H9Q4 299 aaPredicted RBP11.61□□□□□ -0.55
CDC42SE1-207ENST00000540998 FAM207AQ9NSI2 230 aaPredicted RBP11.61□□□□□ -0.55
CDC42SE1-207ENST00000540998 PSD3Q9NYI0 1048 aa11.61□□□□□ -0.55
CDC42SE1-207ENST00000540998 CWC15Q9P013 229 aaKnown RBP11.61□□□□□ -0.55
CDC42SE1-207ENST00000540998 PTPROQ16827 1216 aa11.61□□□□□ -0.55
CDC42SE1-207ENST00000540998 CSGALNACT2Q8N6G5 542 aa11.61□□□□□ -0.55
CDC42SE1-207ENST00000540998 FAM71BQ8TC56 605 aa11.61□□□□□ -0.55
CDC42SE1-207ENST00000540998 CCDC51Q96ER9 411 aa11.61□□□□□ -0.55
CDC42SE1-207ENST00000540998 DUSP9Q99956 384 aaKnown RBP11.61□□□□□ -0.55
CDC42SE1-207ENST00000540998 KANSL2Q9H9L4 492 aa11.61□□□□□ -0.55
CDC42SE1-207ENST00000540998 DISC1Q9NRI5 854 aa11.61□□□□□ -0.55
CDC42SE1-207ENST00000540998 TSPY2A6NKD2 308 aa11.61□□□□□ -0.55
CDC42SE1-207ENST00000540998 KLRC4O43908 158 aa11.61□□□□□ -0.55
CDC42SE1-207ENST00000540998 MOCS3O95396 460 aa11.61□□□□□ -0.55
CDC42SE1-207ENST00000540998 RNASE9P60153 205 aaKnown RBP11.61□□□□□ -0.55
CDC42SE1-207ENST00000540998 APBA1Q02410 837 aa11.61□□□□□ -0.55
CDC42SE1-207ENST00000540998 ANKRD40Q6AI12 368 aa11.61□□□□□ -0.55
CDC42SE1-207ENST00000540998 NFRKBQ6P4R8 1299 aa11.61□□□□□ -0.55
CDC42SE1-207ENST00000540998 HEATR3Q7Z4Q2 680 aa11.61□□□□□ -0.55
CDC42SE1-207ENST00000540998 ANKRD20A12PQ8NF67 263 aa11.61□□□□□ -0.55
CDC42SE1-207ENST00000540998 ZNF507Q8TCN5 953 aa11.61□□□□□ -0.55
CDC42SE1-207ENST00000540998 TUBGCP2Q9BSJ2 902 aa11.61□□□□□ -0.55
CDC42SE1-207ENST00000540998 BCORQ6W2J9 1755 aa11.6□□□□□ -0.55
CDC42SE1-207ENST00000540998 DOCK2Q92608 1830 aa11.6□□□□□ -0.55
CDC42SE1-207ENST00000540998 PLEKHG2Q9H7P9 1386 aa11.6□□□□□ -0.55
CDC42SE1-207ENST00000540998 ZSCAN5CA6NGD5 496 aaPredicted RBP11.6□□□□□ -0.55
CDC42SE1-207ENST00000540998 POTEB2H3BUK9 544 aa11.6□□□□□ -0.55
CDC42SE1-207ENST00000540998 SEMA3EO15041 775 aa11.6□□□□□ -0.55
CDC42SE1-207ENST00000540998 TBC1D8BQ0IIM8 1120 aa11.6□□□□□ -0.55
CDC42SE1-207ENST00000540998 STIM1Q13586 685 aa11.6□□□□□ -0.55
CDC42SE1-207ENST00000540998 GLIS3Q8NEA6 775 aa11.6□□□□□ -0.55
CDC42SE1-207ENST00000540998 AFAP1L1Q8TED9 768 aa11.6□□□□□ -0.55
CDC42SE1-207ENST00000540998 LRRC1Q9BTT6 524 aa11.6□□□□□ -0.55
CDC42SE1-207ENST00000540998 KAT14Q9H8E8 782 aa11.6□□□□□ -0.55
CDC42SE1-207ENST00000540998 PSMD14O00487 310 aa11.6□□□□□ -0.55
CDC42SE1-207ENST00000540998 ENOX2Q16206 610 aaKnown RBP11.6□□□□□ -0.55
CDC42SE1-207ENST00000540998 CCDC96Q2M329 555 aa11.6□□□□□ -0.55
CDC42SE1-207ENST00000540998 RCSD1Q6JBY9 416 aa11.6□□□□□ -0.55
CDC42SE1-207ENST00000540998 SND1Q7KZF4 910 aaKnown RBP eCLIP11.6□□□□□ -0.55
CDC42SE1-207ENST00000540998 DNAAF5Q86Y56 855 aa11.6□□□□□ -0.55
CDC42SE1-207ENST00000540998 SALL4Q9UJQ4 1053 aa11.6□□□□□ -0.55
CDC42SE1-207ENST00000540998 ESYT3A0FGR9 886 aa11.59□□□□□ -0.55
CDC42SE1-207ENST00000540998 CCT5P48643 541 aa11.59□□□□□ -0.55
CDC42SE1-207ENST00000540998 MECOMQ03112 1051 aa11.59□□□□□ -0.55
CDC42SE1-207ENST00000540998 CCDC152Q4G0S7 254 aa11.59□□□□□ -0.55
CDC42SE1-207ENST00000540998 TTI2Q6NXR4 508 aa11.59□□□□□ -0.55
CDC42SE1-207ENST00000540998 PROCA1Q8NCQ7 364 aaPredicted RBP11.59□□□□□ -0.55
CDC42SE1-207ENST00000540998 CELF1Q92879 486 aaKnown RBP11.59□□□□□ -0.55
CDC42SE1-207ENST00000540998 SMARCC1Q92922 1105 aaPredicted RBP11.59□□□□□ -0.55
CDC42SE1-207ENST00000540998 GJA10Q969M2 543 aa11.59□□□□□ -0.55
CDC42SE1-207ENST00000540998 MS4A14Q96JA4 679 aa11.59□□□□□ -0.55
CDC42SE1-207ENST00000540998 DNAJC7Q99615 494 aa11.59□□□□□ -0.55
CDC42SE1-207ENST00000540998 SLC39A2Q9NP94 309 aa11.59□□□□□ -0.55
CDC42SE1-207ENST00000540998 SAMM50Q9Y512 469 aa11.59□□□□□ -0.55
CDC42SE1-207ENST00000540998 DUOX1Q9NRD9 1551 aa11.59□□□□□ -0.55
CDC42SE1-207ENST00000540998 PLCG1P19174 1290 aa11.59□□□□□ -0.55
CDC42SE1-207ENST00000540998 CRKLP46109 303 aaKnown RBP11.59□□□□□ -0.55
CDC42SE1-207ENST00000540998 MTIF2P46199 727 aaKnown RBP11.59□□□□□ -0.55
CDC42SE1-207ENST00000540998 ERFEQ4G0M1 354 aa11.59□□□□□ -0.55
CDC42SE1-207ENST00000540998 KCTD16Q68DU8 428 aa11.59□□□□□ -0.55
CDC42SE1-207ENST00000540998 WDR93Q6P2C0 686 aa11.59□□□□□ -0.55
CDC42SE1-207ENST00000540998 INTS5Q6P9B9 1019 aaKnown RBP11.59□□□□□ -0.55
CDC42SE1-207ENST00000540998 TXNRD3Q86VQ6 643 aa11.59□□□□□ -0.55
CDC42SE1-207ENST00000540998 BLIDQ8IZY5 108 aa11.59□□□□□ -0.55
CDC42SE1-207ENST00000540998 SH2D3CQ8N5H7 860 aa11.59□□□□□ -0.55
CDC42SE1-207ENST00000540998 CNOT6LQ96LI5 555 aaKnown RBP11.59□□□□□ -0.55
CDC42SE1-207ENST00000540998 DCP1AQ9NPI6 582 aaPredicted RBP11.59□□□□□ -0.55
CDC42SE1-207ENST00000540998 BUB1O43683 1085 aa11.59□□□□□ -0.55
CDC42SE1-207ENST00000540998 UBA7P41226 1012 aa11.59□□□□□ -0.55
CDC42SE1-207ENST00000540998 PFKFB3Q16875 520 aaPredicted RBP11.59□□□□□ -0.55
CDC42SE1-207ENST00000540998 TSEN2Q8NCE0 465 aaKnown RBP11.59□□□□□ -0.55
CDC42SE1-207ENST00000540998 HAUS4Q9H6D7 363 aa11.59□□□□□ -0.55
CDC42SE1-207ENST00000540998 VAT1LQ9HCJ6 419 aa11.59□□□□□ -0.55
CDC42SE1-207ENST00000540998 CAPN11Q9UMQ6 739 aa11.59□□□□□ -0.55
CDC42SE1-207ENST00000540998 CYTH3O43739 400 aa11.58□□□□□ -0.56
CDC42SE1-207ENST00000540998 ATP6V1AP38606 617 aa11.58□□□□□ -0.56
CDC42SE1-207ENST00000540998 SPAG1Q07617 926 aa11.58□□□□□ -0.56
CDC42SE1-207ENST00000540998 PDE4DQ08499 809 aa11.58□□□□□ -0.56
CDC42SE1-207ENST00000540998 TXNRD1Q16881 649 aa11.58□□□□□ -0.56
CDC42SE1-207ENST00000540998 TSR1Q2NL82 804 aaKnown RBP11.58□□□□□ -0.56
CDC42SE1-207ENST00000540998 DTHD1Q6ZMT9 781 aa11.58□□□□□ -0.56
CDC42SE1-207ENST00000540998 C2CD5Q86YS7 1000 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms