RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 MAGEB6Q8N7X4 407 aa6.79□□□□□ -1.32
PRKDC-209ENST00000540819 ZBTB38Q8NAP3 1195 aaPredicted RBP6.79□□□□□ -1.32
PRKDC-209ENST00000540819 MYRIPQ8NFW9 859 aa6.79□□□□□ -1.32
PRKDC-209ENST00000540819 PAGR1Q9BTK6 254 aa6.79□□□□□ -1.32
PRKDC-209ENST00000540819 AASDHPPTQ9NRN7 309 aa6.79□□□□□ -1.32
PRKDC-209ENST00000540819 CRIM1Q9NZV1 1036 aa6.79□□□□□ -1.32
PRKDC-209ENST00000540819 ZNF69Q9UC07 566 aa6.79□□□□□ -1.32
PRKDC-209ENST00000540819 TAGLN3Q9UI15 199 aa6.79□□□□□ -1.32
PRKDC-209ENST00000540819 MRPS23Q9Y3D9 190 aaKnown RBP6.79□□□□□ -1.32
PRKDC-209ENST00000540819 PHLDB1Q86UU1 1377 aa6.79□□□□□ -1.32
PRKDC-209ENST00000540819 KAT6BQ8WYB5 2073 aa6.78□□□□□ -1.32
PRKDC-209ENST00000540819 PLD2O14939 933 aa6.78□□□□□ -1.32
PRKDC-209ENST00000540819 ZNF500O60304 480 aaPredicted RBP6.78□□□□□ -1.32
PRKDC-209ENST00000540819 RFPL1O75677 317 aa6.78□□□□□ -1.32
PRKDC-209ENST00000540819 F13A1P00488 732 aa6.78□□□□□ -1.32
PRKDC-209ENST00000540819 F2P00734 622 aa6.78□□□□□ -1.32
PRKDC-209ENST00000540819 CELA3AP09093 270 aa6.78□□□□□ -1.32
PRKDC-209ENST00000540819 PPP2R3AQ06190 1150 aa6.78□□□□□ -1.32
PRKDC-209ENST00000540819 CDK5R2Q13319 367 aa6.78□□□□□ -1.32
PRKDC-209ENST00000540819 MTMR1Q13613 665 aa6.78□□□□□ -1.32
PRKDC-209ENST00000540819 FNDC3BQ53EP0 1204 aaKnown RBP6.78□□□□□ -1.32
PRKDC-209ENST00000540819 C6orf15Q6UXA7 325 aaPredicted RBP6.78□□□□□ -1.32
PRKDC-209ENST00000540819 TPTE2Q6XPS3 522 aa6.78□□□□□ -1.32
PRKDC-209ENST00000540819 EEPD1Q7L9B9 569 aa6.78□□□□□ -1.32
PRKDC-209ENST00000540819 ZBTB46Q86UZ6 589 aa6.78□□□□□ -1.32
PRKDC-209ENST00000540819 LRRC47Q8N1G4 583 aaKnown RBP6.78□□□□□ -1.32
PRKDC-209ENST00000540819 GATAD2BQ8WXI9 593 aa6.78□□□□□ -1.32
PRKDC-209ENST00000540819 HOOK2Q96ED9 719 aa6.78□□□□□ -1.32
PRKDC-209ENST00000540819 FANCD2OSQ96PS1 177 aa6.78□□□□□ -1.32
PRKDC-209ENST00000540819 RTFDC1Q9BY42 306 aaPredicted RBP6.78□□□□□ -1.32
PRKDC-209ENST00000540819 INO80BQ9C086 356 aaPredicted RBP6.78□□□□□ -1.32
PRKDC-209ENST00000540819 ZHX3Q9H4I2 956 aa6.78□□□□□ -1.32
PRKDC-209ENST00000540819 CCDC86Q9H6F5 360 aaKnown RBP6.78□□□□□ -1.32
PRKDC-209ENST00000540819 PPCSQ9HAB8 311 aa6.78□□□□□ -1.32
PRKDC-209ENST00000540819 ABCB6Q9NP58 842 aa6.78□□□□□ -1.32
PRKDC-209ENST00000540819 SSU72Q9NP77 194 aaKnown RBP6.78□□□□□ -1.32
PRKDC-209ENST00000540819 SLC5A4Q9NY91 659 aa6.78□□□□□ -1.32
PRKDC-209ENST00000540819 VAV3Q9UKW4 847 aa6.78□□□□□ -1.32
PRKDC-209ENST00000540819 SPEF1Q9Y4P9 236 aa6.78□□□□□ -1.32
PRKDC-209ENST00000540819 B2RBV5 119 aa6.77□□□□□ -1.33
PRKDC-209ENST00000540819 ADCY3O60266 1144 aa6.77□□□□□ -1.33
PRKDC-209ENST00000540819 PAPLNO95428 1278 aa6.77□□□□□ -1.33
PRKDC-209ENST00000540819 TRIM27P14373 513 aa6.77□□□□□ -1.33
PRKDC-209ENST00000540819 TRAPPC10P48553 1259 aa6.77□□□□□ -1.33
PRKDC-209ENST00000540819 JAG1P78504 1218 aa6.77□□□□□ -1.33
PRKDC-209ENST00000540819 ITKQ08881 620 aa6.77□□□□□ -1.33
PRKDC-209ENST00000540819 CBX2Q14781 532 aaPredicted RBP6.77□□□□□ -1.33
PRKDC-209ENST00000540819 RNF219Q5W0B1 726 aaPredicted RBP6.77□□□□□ -1.33
PRKDC-209ENST00000540819 DIEXFQ68CQ4 756 aaKnown RBP6.77□□□□□ -1.33
PRKDC-209ENST00000540819 PLD6Q8N2A8 252 aaKnown RBP6.77□□□□□ -1.33
PRKDC-209ENST00000540819 TEX19Q8NA77 164 aa6.77□□□□□ -1.33
PRKDC-209ENST00000540819 FBXO27Q8NI29 283 aa6.77□□□□□ -1.33
PRKDC-209ENST00000540819 PI4K2BQ8TCG2 481 aa6.77□□□□□ -1.33
PRKDC-209ENST00000540819 MTMR8Q96EF0 704 aa6.77□□□□□ -1.33
PRKDC-209ENST00000540819 WDR89Q96FK6 387 aaPredicted RBP6.77□□□□□ -1.33
PRKDC-209ENST00000540819 SMAD5Q99717 465 aaKnown RBP6.77□□□□□ -1.33
PRKDC-209ENST00000540819 TARS2Q9BW92 718 aaKnown RBP6.77□□□□□ -1.33
PRKDC-209ENST00000540819 NCOA5Q9HCD5 579 aaKnown RBP6.77□□□□□ -1.33
PRKDC-209ENST00000540819 KRT82Q9NSB4 513 aa6.77□□□□□ -1.33
PRKDC-209ENST00000540819 INTS7Q9NVH2 962 aaKnown RBP6.77□□□□□ -1.33
PRKDC-209ENST00000540819 NRBP1Q9UHY1 535 aa6.77□□□□□ -1.33
PRKDC-209ENST00000540819 PCOLCE2Q9UKZ9 415 aa6.77□□□□□ -1.33
PRKDC-209ENST00000540819 FAM221AA4D161 298 aa6.76□□□□□ -1.33
PRKDC-209ENST00000540819 IQCA1LA6NCM1 817 aa6.76□□□□□ -1.33
PRKDC-209ENST00000540819 GSTP1P09211 210 aaKnown RBP6.76□□□□□ -1.33
PRKDC-209ENST00000540819 U2AF1L5P0DN76 240 aaPredicted RBP6.76□□□□□ -1.33
PRKDC-209ENST00000540819 HTR3AP46098 478 aa6.76□□□□□ -1.33
PRKDC-209ENST00000540819 U2AF1Q01081 240 aaKnown RBP eCLIP6.76□□□□□ -1.33
PRKDC-209ENST00000540819 PRKCQQ04759 706 aa6.76□□□□□ -1.33
PRKDC-209ENST00000540819 PICALMQ13492 652 aa6.76□□□□□ -1.33
PRKDC-209ENST00000540819 MRM1Q6IN84 353 aaKnown RBP6.76□□□□□ -1.33
PRKDC-209ENST00000540819 CXorf57Q6NSI4 855 aaKnown RBP6.76□□□□□ -1.33
PRKDC-209ENST00000540819 BNC2Q6ZN30 1099 aaPredicted RBP6.76□□□□□ -1.33
PRKDC-209ENST00000540819 ATG4DQ86TL0 474 aaPredicted RBP6.76□□□□□ -1.33
PRKDC-209ENST00000540819 FAM181AQ8N9Y4 354 aa6.76□□□□□ -1.33
PRKDC-209ENST00000540819 WDR66Q8TBY9 1149 aa6.76□□□□□ -1.33
PRKDC-209ENST00000540819 EPN3Q9H201 632 aa6.76□□□□□ -1.33
PRKDC-209ENST00000540819 RC3H2Q9HBD1 1191 aaKnown RBP6.76□□□□□ -1.33
PRKDC-209ENST00000540819 PTPRHQ9HD43 1115 aa6.76□□□□□ -1.33
PRKDC-209ENST00000540819 DISC1Q9NRI5 854 aa6.76□□□□□ -1.33
PRKDC-209ENST00000540819 GPN3Q9UHW5 284 aaPredicted RBP6.76□□□□□ -1.33
PRKDC-209ENST00000540819 ZNF180Q9UJW8 692 aa6.76□□□□□ -1.33
PRKDC-209ENST00000540819 NOB1Q9ULX3 412 aaKnown RBP6.76□□□□□ -1.33
PRKDC-209ENST00000540819 A0A1W2PQH9 124 aa6.75□□□□□ -1.33
PRKDC-209ENST00000540819 ZNF862O60290 1169 aa6.75□□□□□ -1.33
PRKDC-209ENST00000540819 MYL3P08590 195 aa6.75□□□□□ -1.33
PRKDC-209ENST00000540819 NBPF7P0C2Y1 421 aaPredicted RBP6.75□□□□□ -1.33
PRKDC-209ENST00000540819 CD8BP10966 210 aa6.75□□□□□ -1.33
PRKDC-209ENST00000540819 LMNB1P20700 586 aa6.75□□□□□ -1.33
PRKDC-209ENST00000540819 FUT4P22083 530 aa6.75□□□□□ -1.33
PRKDC-209ENST00000540819 CLCQ05315 142 aa6.75□□□□□ -1.33
PRKDC-209ENST00000540819 TTLL4Q14679 1199 aa6.75□□□□□ -1.33
PRKDC-209ENST00000540819 AOC3Q16853 763 aa6.75□□□□□ -1.33
PRKDC-209ENST00000540819 KIF4BQ2VIQ3 1234 aa6.75□□□□□ -1.33
PRKDC-209ENST00000540819 ERAP2Q6P179 960 aa6.75□□□□□ -1.33
PRKDC-209ENST00000540819 GK5Q6ZS86 529 aa6.75□□□□□ -1.33
PRKDC-209ENST00000540819 REC114Q7Z4M0 266 aa6.75□□□□□ -1.33
PRKDC-209ENST00000540819 LRRTM3Q86VH5 581 aa6.75□□□□□ -1.33
PRKDC-209ENST00000540819 SMAP1Q8IYB5 467 aaPredicted RBP6.75□□□□□ -1.33
PRKDC-209ENST00000540819 AHI1Q8N157 1196 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms