RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 SALL3Q9BXA9 1300 aa19.3■□□□□ 0.68
TRIM65-203ENST00000540812 SLC3A2P08195 630 aaKnown RBP19.3■□□□□ 0.68
TRIM65-203ENST00000540812 KCNA10Q16322 511 aa19.3■□□□□ 0.68
TRIM65-203ENST00000540812 FBXO40Q9UH90 709 aa19.3■□□□□ 0.68
TRIM65-203ENST00000540812 ISY1Q9ULR0 285 aaKnown RBP19.3■□□□□ 0.68
TRIM65-203ENST00000540812 MCM3APO60318 1980 aa19.3■□□□□ 0.68
TRIM65-203ENST00000540812 DUSP11O75319 330 aaKnown RBP19.29■□□□□ 0.68
TRIM65-203ENST00000540812 CTDSPL2Q05D32 466 aa19.29■□□□□ 0.68
TRIM65-203ENST00000540812 FAAP100Q0VG06 881 aa19.29■□□□□ 0.68
TRIM65-203ENST00000540812 CCDC144BQ3MJ40 725 aa19.29■□□□□ 0.68
TRIM65-203ENST00000540812 ARMCX2Q7L311 632 aa19.29■□□□□ 0.68
TRIM65-203ENST00000540812 RASGRP2Q7LDG7 609 aa19.29■□□□□ 0.68
TRIM65-203ENST00000540812 ANKRD33Q7Z3H0 272 aa19.29■□□□□ 0.68
TRIM65-203ENST00000540812 AGBL1Q96MI9 1066 aa19.29■□□□□ 0.68
TRIM65-203ENST00000540812 KATNBL1Q9H079 304 aa19.29■□□□□ 0.68
TRIM65-203ENST00000540812 TMEM39AQ9NV64 488 aa19.29■□□□□ 0.68
TRIM65-203ENST00000540812 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.29■□□□□ 0.68
TRIM65-203ENST00000540812 PRUNE2Q8WUY3 3088 aa19.28■□□□□ 0.68
TRIM65-203ENST00000540812 ZNF536O15090 1300 aa19.28■□□□□ 0.68
TRIM65-203ENST00000540812 MOXD2PA6NHM9 499 aa19.28■□□□□ 0.68
TRIM65-203ENST00000540812 NMT2O60551 498 aa19.28■□□□□ 0.68
TRIM65-203ENST00000540812 RAG1P15918 1043 aa19.28■□□□□ 0.68
TRIM65-203ENST00000540812 MCCP23508 829 aa19.28■□□□□ 0.68
TRIM65-203ENST00000540812 SLC1A4P43007 532 aa19.28■□□□□ 0.68
TRIM65-203ENST00000540812 STAT2P52630 851 aa19.28■□□□□ 0.68
TRIM65-203ENST00000540812 CNTN2Q02246 1040 aa19.28■□□□□ 0.68
TRIM65-203ENST00000540812 VPS53Q5VIR6 699 aa19.28■□□□□ 0.68
TRIM65-203ENST00000540812 KCTD1Q719H9 257 aa19.28■□□□□ 0.68
TRIM65-203ENST00000540812 CCDC144CPQ8IYA2 1237 aa19.28■□□□□ 0.68
TRIM65-203ENST00000540812 NUP133Q8WUM0 1156 aa19.28■□□□□ 0.68
TRIM65-203ENST00000540812 STAG1Q8WVM7 1258 aa19.28■□□□□ 0.68
TRIM65-203ENST00000540812 GMCL1Q96IK5 515 aa19.28■□□□□ 0.68
TRIM65-203ENST00000540812 TOX2Q96NM4 488 aa19.28■□□□□ 0.68
TRIM65-203ENST00000540812 SEMA6BQ9H3T3 888 aa19.28■□□□□ 0.68
TRIM65-203ENST00000540812 ABHD16BQ9H3Z7 469 aa19.28■□□□□ 0.68
TRIM65-203ENST00000540812 IL17RBQ9NRM6 502 aa19.28■□□□□ 0.68
TRIM65-203ENST00000540812 C6orf222P0C671 652 aaPredicted RBP19.27■□□□□ 0.68
TRIM65-203ENST00000540812 CST5P28325 142 aaPredicted RBP19.27■□□□□ 0.68
TRIM65-203ENST00000540812 SNAP25P60880 206 aa19.27■□□□□ 0.68
TRIM65-203ENST00000540812 SMAD3P84022 425 aaKnown RBP19.27■□□□□ 0.68
TRIM65-203ENST00000540812 IKQ13123 557 aaPredicted RBP19.27■□□□□ 0.68
TRIM65-203ENST00000540812 FAM160B2Q86V87 743 aa19.27■□□□□ 0.68
TRIM65-203ENST00000540812 FAM133AQ8N9E0 248 aa19.27■□□□□ 0.68
TRIM65-203ENST00000540812 CDX2Q99626 313 aaPredicted RBP19.27■□□□□ 0.68
TRIM65-203ENST00000540812 UPF3AQ9H1J1 476 aaKnown RBP19.27■□□□□ 0.68
TRIM65-203ENST00000540812 TTYH1Q9H313 450 aaPredicted RBP19.27■□□□□ 0.68
TRIM65-203ENST00000540812 ACAD9Q9H845 621 aa19.27■□□□□ 0.68
TRIM65-203ENST00000540812 A1CFQ9NQ94 594 aaKnown RBP19.27■□□□□ 0.68
TRIM65-203ENST00000540812 RNF146Q9NTX7 359 aa19.27■□□□□ 0.68
TRIM65-203ENST00000540812 STX8Q9UNK0 236 aa19.27■□□□□ 0.68
TRIM65-203ENST00000540812 SOWAHBA6NEL2 793 aa19.26■□□□□ 0.67
TRIM65-203ENST00000540812 DCDC2CA8MYV0 355 aa19.26■□□□□ 0.67
TRIM65-203ENST00000540812 ASGR1P07306 291 aa19.26■□□□□ 0.67
TRIM65-203ENST00000540812 FDX1P10109 184 aa19.26■□□□□ 0.67
TRIM65-203ENST00000540812 RRP1P56182 461 aaKnown RBP19.26■□□□□ 0.67
TRIM65-203ENST00000540812 GJA9P57773 515 aa19.26■□□□□ 0.67
TRIM65-203ENST00000540812 ANKRD45Q5TZF3 282 aa19.26■□□□□ 0.67
TRIM65-203ENST00000540812 CCDC174Q6PII3 467 aa19.26■□□□□ 0.67
TRIM65-203ENST00000540812 CHURC1Q8WUH1 139 aa19.26■□□□□ 0.67
TRIM65-203ENST00000540812 RNPC3Q96LT9 517 aaKnown RBP19.26■□□□□ 0.67
TRIM65-203ENST00000540812 TBX21Q9UL17 535 aa19.26■□□□□ 0.67
TRIM65-203ENST00000540812 DDX49Q9Y6V7 483 aaKnown RBP19.26■□□□□ 0.67
TRIM65-203ENST00000540812 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.25■□□□□ 0.67
TRIM65-203ENST00000540812 TSPY2A6NKD2 308 aa19.25■□□□□ 0.67
TRIM65-203ENST00000540812 CTAGE5O15320 804 aa19.25■□□□□ 0.67
TRIM65-203ENST00000540812 CDK7P50613 346 aa19.25■□□□□ 0.67
TRIM65-203ENST00000540812 FPGSQ05932 587 aa19.25■□□□□ 0.67
TRIM65-203ENST00000540812 GLT1D1Q96MS3 346 aa19.25■□□□□ 0.67
TRIM65-203ENST00000540812 TRERF1Q96PN7 1200 aa19.25■□□□□ 0.67
TRIM65-203ENST00000540812 CRBNQ96SW2 442 aa19.25■□□□□ 0.67
TRIM65-203ENST00000540812 MTMR7Q9Y216 660 aa19.25■□□□□ 0.67
TRIM65-203ENST00000540812 ELP1O95163 1332 aa19.25■□□□□ 0.67
TRIM65-203ENST00000540812 RANBP6O60518 1105 aaKnown RBP19.24■□□□□ 0.67
TRIM65-203ENST00000540812 PLA2G6O60733 806 aa19.24■□□□□ 0.67
TRIM65-203ENST00000540812 ALAS1P13196 640 aa19.24■□□□□ 0.67
TRIM65-203ENST00000540812 PTGS1P23219 599 aa19.24■□□□□ 0.67
TRIM65-203ENST00000540812 GNASQ5JWF2 1037 aa19.24■□□□□ 0.67
TRIM65-203ENST00000540812 RCSD1Q6JBY9 416 aa19.24■□□□□ 0.67
TRIM65-203ENST00000540812 PCSK9Q8NBP7 692 aaKnown RBP19.24■□□□□ 0.67
TRIM65-203ENST00000540812 VTI1AQ96AJ9 217 aa19.24■□□□□ 0.67
TRIM65-203ENST00000540812 YTHDC1Q96MU7 727 aaKnown RBP19.24■□□□□ 0.67
TRIM65-203ENST00000540812 SPC25Q9HBM1 224 aa19.24■□□□□ 0.67
TRIM65-203ENST00000540812 ANAPC4Q9UJX5 808 aa19.24■□□□□ 0.67
TRIM65-203ENST00000540812 PRR12Q9ULL5 1215 aa19.24■□□□□ 0.67
TRIM65-203ENST00000540812 SPTBN5Q9NRC6 3674 aaKnown RBP19.24■□□□□ 0.67
TRIM65-203ENST00000540812 ASTN1O14525 1302 aa19.24■□□□□ 0.67
TRIM65-203ENST00000540812 TIMP1P01033 207 aa19.23■□□□□ 0.67
TRIM65-203ENST00000540812 NOVP48745 357 aa19.23■□□□□ 0.67
TRIM65-203ENST00000540812 BEX3Q00994 111 aa19.23■□□□□ 0.67
TRIM65-203ENST00000540812 TKFCQ3LXA3 575 aa19.23■□□□□ 0.67
TRIM65-203ENST00000540812 MUM1L1Q5H9M0 696 aa19.23■□□□□ 0.67
TRIM65-203ENST00000540812 PPP4R3BQ5MIZ7 849 aa19.23■□□□□ 0.67
TRIM65-203ENST00000540812 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.23■□□□□ 0.674e-7■■■■■ 73.7
TRIM65-203ENST00000540812 MYLIPQ8WY64 445 aa19.23■□□□□ 0.67
TRIM65-203ENST00000540812 EVI5LQ96CN4 794 aa19.23■□□□□ 0.67
TRIM65-203ENST00000540812 ARVCFO00192 962 aa19.22■□□□□ 0.67
TRIM65-203ENST00000540812 PDE1AP54750 535 aa19.22■□□□□ 0.67
TRIM65-203ENST00000540812 TNFAIP2Q03169 654 aa19.22■□□□□ 0.67
TRIM65-203ENST00000540812 FAM227BQ96M60 508 aa19.22■□□□□ 0.67
TRIM65-203ENST00000540812 MROH7Q68CQ1 1323 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms