RNA–Protein interactions for RNA: ENST00000540797.5

USP3-204, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2 BASIC

Gene USP3, Length 5,474 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-204ENST00000540797 RABGAP1Q9Y3P9 1069 aa15.61■□□□□ 0.09
USP3-204ENST00000540797 CEP152O94986 1710 aa15.61■□□□□ 0.09
USP3-204ENST00000540797 hCG_1984214I3L0E3 225 aa15.61■□□□□ 0.09
USP3-204ENST00000540797 ZNF713Q8N859 430 aaPredicted RBP15.61■□□□□ 0.09
USP3-204ENST00000540797 ATP6V0A1Q93050 837 aa15.61■□□□□ 0.09
USP3-204ENST00000540797 SFMBT2Q5VUG0 894 aa15.61■□□□□ 0.09
USP3-204ENST00000540797 SPECC1LQ69YQ0 1117 aa15.61■□□□□ 0.09
USP3-204ENST00000540797 RASGRP4Q8TDF6 673 aa15.61■□□□□ 0.09
USP3-204ENST00000540797 SH3RF3Q8TEJ3 882 aaPredicted RBP15.61■□□□□ 0.09
USP3-204ENST00000540797 JAKMIP2Q96AA8 810 aa15.61■□□□□ 0.09
USP3-204ENST00000540797 ZSWIM5Q9P217 1185 aa15.61■□□□□ 0.09
USP3-204ENST00000540797 TNNC2P02585 160 aa15.61■□□□□ 0.09
USP3-204ENST00000540797 FAM160B2Q86V87 743 aa15.61■□□□□ 0.09
USP3-204ENST00000540797 CLIC6Q96NY7 704 aa15.61■□□□□ 0.09
USP3-204ENST00000540797 STMN4Q9H169 189 aaPredicted RBP15.61■□□□□ 0.09
USP3-204ENST00000540797 NFIXQ14938 502 aa15.61■□□□□ 0.09
USP3-204ENST00000540797 SIRT2Q8IXJ6 389 aa15.61■□□□□ 0.09
USP3-204ENST00000540797 UBL4BQ8N7F7 174 aa15.61■□□□□ 0.09
USP3-204ENST00000540797 CCDC63Q8NA47 563 aa15.61■□□□□ 0.09
USP3-204ENST00000540797 FOXP1Q9H334 677 aaPredicted RBP15.61■□□□□ 0.09
USP3-204ENST00000540797 FAM207AQ9NSI2 230 aaPredicted RBP15.61■□□□□ 0.09
USP3-204ENST00000540797 LMBRD1Q9NUN5 540 aa15.61■□□□□ 0.09
USP3-204ENST00000540797 SH2B2O14492 632 aaPredicted RBP15.6■□□□□ 0.09
USP3-204ENST00000540797 KIAA1524Q8TCG1 905 aa15.6■□□□□ 0.09
USP3-204ENST00000540797 FAM193BQ96PV7 902 aaPredicted RBP15.6■□□□□ 0.09
USP3-204ENST00000540797 FAM204AQ9H8W3 233 aa15.6■□□□□ 0.09
USP3-204ENST00000540797 SEPT9Q9UHD8 586 aaPredicted RBP15.6■□□□□ 0.09
USP3-204ENST00000540797 KIAA1024Q9UPX6 916 aa15.6■□□□□ 0.09
USP3-204ENST00000540797 SNAP23O00161 211 aa15.6■□□□□ 0.09
USP3-204ENST00000540797 TRAPPC10P48553 1259 aa15.6■□□□□ 0.09
USP3-204ENST00000540797 TUBB4BP68371 445 aa15.6■□□□□ 0.09
USP3-204ENST00000540797 SYMPKQ92797 1274 aaKnown RBP15.6■□□□□ 0.09
USP3-204ENST00000540797 COA7Q96BR5 231 aa15.6■□□□□ 0.09
USP3-204ENST00000540797 ZNF341Q9BYN7 854 aa15.6■□□□□ 0.09
USP3-204ENST00000540797 FAM107BQ9H098 131 aa15.6■□□□□ 0.09
USP3-204ENST00000540797 ZNF277Q9NRM2 450 aaPredicted RBP15.6■□□□□ 0.09
USP3-204ENST00000540797 KIAA1468Q9P260 1216 aa15.6■□□□□ 0.09
USP3-204ENST00000540797 PTCH1Q13635 1447 aa15.6■□□□□ 0.09
USP3-204ENST00000540797 GTPBP6O43824 516 aaPredicted RBP15.6■□□□□ 0.09
USP3-204ENST00000540797 ASNSP08243 561 aa15.6■□□□□ 0.09
USP3-204ENST00000540797 ISCA1Q9BUE6 129 aa15.6■□□□□ 0.09
USP3-204ENST00000540797 USTQ9Y2C2 406 aa15.6■□□□□ 0.09
USP3-204ENST00000540797 PLEKHG2Q9H7P9 1386 aa15.6■□□□□ 0.09
USP3-204ENST00000540797 RIMBP3CA6NJZ7 1639 aa15.6■□□□□ 0.09
USP3-204ENST00000540797 RIMBP3BA6NNM3 1639 aa15.6■□□□□ 0.09
USP3-204ENST00000540797 RIMBP3Q9UFD9 1639 aa15.6■□□□□ 0.09
USP3-204ENST00000540797 CDC42BPBQ9Y5S2 1711 aa15.6■□□□□ 0.09
USP3-204ENST00000540797 E7EVH7 732 aa15.6■□□□□ 0.09
USP3-204ENST00000540797 LAD1O00515 517 aa15.6■□□□□ 0.09
USP3-204ENST00000540797 PRDX5P30044 214 aa15.6■□□□□ 0.09
USP3-204ENST00000540797 MAGEA1P43355 309 aa15.6■□□□□ 0.09
USP3-204ENST00000540797 ZNF75DP51815 510 aa15.6■□□□□ 0.09
USP3-204ENST00000540797 MCM6Q14566 821 aa15.6■□□□□ 0.09
USP3-204ENST00000540797 TMEM179Q6ZVK1 233 aa15.6■□□□□ 0.09
USP3-204ENST00000540797 TDRD3Q9H7E2 651 aaKnown RBP15.6■□□□□ 0.09
USP3-204ENST00000540797 RNF181Q9P0P0 153 aa15.6■□□□□ 0.09
USP3-204ENST00000540797 CLIC4Q9Y696 253 aa15.6■□□□□ 0.09
USP3-204ENST00000540797 ERCC5P28715 1186 aaPredicted RBP15.59■□□□□ 0.09
USP3-204ENST00000540797 CCND2P30279 289 aa15.59■□□□□ 0.09
USP3-204ENST00000540797 VAV2P52735 878 aa15.59■□□□□ 0.09
USP3-204ENST00000540797 TFDP1Q14186 410 aa15.59■□□□□ 0.09
USP3-204ENST00000540797 TMTC1Q8IUR5 882 aa15.59■□□□□ 0.09
USP3-204ENST00000540797 C2orf69Q8N8R5 385 aa15.59■□□□□ 0.09
USP3-204ENST00000540797 CCDC26Q8TAB7 109 aa15.59■□□□□ 0.09
USP3-204ENST00000540797 PGBD1Q96JS3 809 aa15.59■□□□□ 0.09
USP3-204ENST00000540797 BRIP1Q9BX63 1249 aa15.59■□□□□ 0.09
USP3-204ENST00000540797 NLRC4Q9NPP4 1024 aa15.59■□□□□ 0.09
USP3-204ENST00000540797 PCDHA7Q9UN72 937 aa15.59■□□□□ 0.09
USP3-204ENST00000540797 RPAP1Q9BWH6 1393 aaPredicted RBP15.59■□□□□ 0.09
USP3-204ENST00000540797 FAM26FQ5R3K3 315 aa15.59■□□□□ 0.09
USP3-204ENST00000540797 ARMCX5Q6P1M9 558 aa15.59■□□□□ 0.09
USP3-204ENST00000540797 STRBPQ96SI9 672 aaKnown RBP15.59■□□□□ 0.09
USP3-204ENST00000540797 NUCKS1Q9H1E3 243 aaKnown RBP15.59■□□□□ 0.09
USP3-204ENST00000540797 ARMCX3Q9UH62 379 aaPredicted RBP15.59■□□□□ 0.09
USP3-204ENST00000540797 GH2P01242 217 aa15.59■□□□□ 0.09
USP3-204ENST00000540797 GCFC2P16383 781 aaKnown RBP15.59■□□□□ 0.09
USP3-204ENST00000540797 CDHR1Q96JP9 859 aa15.59■□□□□ 0.09
USP3-204ENST00000540797 LSM14BQ9BX40 385 aaKnown RBP15.59■□□□□ 0.09
USP3-204ENST00000540797 CAMSAP1Q5T5Y3 1602 aa15.59■□□□□ 0.09
USP3-204ENST00000540797 OPA1O60313 960 aa15.58■□□□□ 0.09
USP3-204ENST00000540797 RHOXF2BP0C7M4 288 aa15.58■□□□□ 0.09
USP3-204ENST00000540797 ATF7P17544 494 aaPredicted RBP15.58■□□□□ 0.09
USP3-204ENST00000540797 KRBA2Q6ZNG9 492 aa15.58■□□□□ 0.09
USP3-204ENST00000540797 RRAGAQ7L523 313 aa15.58■□□□□ 0.09
USP3-204ENST00000540797 TBCKQ8TEA7 893 aa15.58■□□□□ 0.09
USP3-204ENST00000540797 RHOXF2Q9BQY4 288 aa15.58■□□□□ 0.09
USP3-204ENST00000540797 ZHX1Q9UKY1 873 aaPredicted RBP15.58■□□□□ 0.09
USP3-204ENST00000540797 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.58■□□□□ 0.09
USP3-204ENST00000540797 RASA3Q14644 834 aa15.58■□□□□ 0.08
USP3-204ENST00000540797 RSPH3Q86UC2 560 aa15.58■□□□□ 0.08
USP3-204ENST00000540797 ANO3Q9BYT9 981 aa15.58■□□□□ 0.08
USP3-204ENST00000540797 WDR11Q9BZH6 1224 aa15.58■□□□□ 0.08
USP3-204ENST00000540797 PODXL2Q9NZ53 605 aa15.58■□□□□ 0.08
USP3-204ENST00000540797 LMTK2Q8IWU2 1503 aa15.58■□□□□ 0.08
USP3-204ENST00000540797 CDC37Q16543 378 aaPredicted RBP15.58■□□□□ 0.08
USP3-204ENST00000540797 HS1BP3Q53T59 392 aa15.58■□□□□ 0.08
USP3-204ENST00000540797 MIS18BP1Q6P0N0 1132 aa15.58■□□□□ 0.08
USP3-204ENST00000540797 NSUN7Q8NE18 718 aaKnown RBP15.58■□□□□ 0.08
USP3-204ENST00000540797 SLC39A2Q9NP94 309 aa15.58■□□□□ 0.08
USP3-204ENST00000540797 PNMA3Q9UL41 463 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms