RNA–Protein interactions for RNA: ENST00000540664.6

LCOR-209, Transcript of ligand dependent nuclear receptor corepressor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LCOR, Length 2,213 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCOR-209ENST00000540664 KCNQ5Q9NR82 932 aa10.82□□□□□ -0.68
LCOR-209ENST00000540664 SAMSN1Q9NSI8 373 aaKnown RBP10.82□□□□□ -0.68
LCOR-209ENST00000540664 MYL1P05976 194 aa10.81□□□□□ -0.68
LCOR-209ENST00000540664 HLA-DOAP06340 250 aa10.81□□□□□ -0.68
LCOR-209ENST00000540664 SEMA3FQ13275 785 aa10.81□□□□□ -0.68
LCOR-209ENST00000540664 KARSQ15046 597 aaKnown RBP10.81□□□□□ -0.68
LCOR-209ENST00000540664 PPP1R18Q6NYC8 613 aa10.81□□□□□ -0.68
LCOR-209ENST00000540664 HOMER1Q86YM7 354 aa10.81□□□□□ -0.68
LCOR-209ENST00000540664 LRRC47Q8N1G4 583 aaKnown RBP10.81□□□□□ -0.68
LCOR-209ENST00000540664 CCDC112Q8NEF3 446 aa10.81□□□□□ -0.68
LCOR-209ENST00000540664 MTMR8Q96EF0 704 aa10.81□□□□□ -0.68
LCOR-209ENST00000540664 CCDC17Q96LX7 622 aa10.81□□□□□ -0.68
LCOR-209ENST00000540664 AK8Q96MA6 479 aa10.81□□□□□ -0.68
LCOR-209ENST00000540664 UBA5Q9GZZ9 404 aa10.81□□□□□ -0.68
LCOR-209ENST00000540664 DNAJC18Q9H819 358 aa10.81□□□□□ -0.68
LCOR-209ENST00000540664 SYNRGQ9UMZ2 1314 aa10.81□□□□□ -0.68
LCOR-209ENST00000540664 MYH4Q9Y623 1939 aa10.81□□□□□ -0.68
LCOR-209ENST00000540664 G3V3G9 751 aa10.81□□□□□ -0.68
LCOR-209ENST00000540664 RIOK3O14730 519 aaKnown RBP10.81□□□□□ -0.68
LCOR-209ENST00000540664 CHRNA5P30532 468 aa10.81□□□□□ -0.68
LCOR-209ENST00000540664 PPP4R3BQ5MIZ7 849 aa10.81□□□□□ -0.68
LCOR-209ENST00000540664 DCAF8Q5TAQ9 597 aa10.81□□□□□ -0.68
LCOR-209ENST00000540664 SOGA3Q5TF21 947 aa10.81□□□□□ -0.68
LCOR-209ENST00000540664 ZNF658Q5TYW1 1059 aaPredicted RBP10.81□□□□□ -0.68
LCOR-209ENST00000540664 NEK8Q86SG6 692 aa10.81□□□□□ -0.68
LCOR-209ENST00000540664 ZFPM1Q8IX07 1006 aa10.81□□□□□ -0.68
LCOR-209ENST00000540664 STAMQ92783 540 aa10.81□□□□□ -0.68
LCOR-209ENST00000540664 DHX36Q9H2U1 1008 aaKnown RBP10.81□□□□□ -0.68
LCOR-209ENST00000540664 KBTBD4Q9NVX7 518 aa10.81□□□□□ -0.68
LCOR-209ENST00000540664 RMND1Q9NWS8 449 aa10.81□□□□□ -0.68
LCOR-209ENST00000540664 PAXBP1Q9Y5B6 917 aa10.81□□□□□ -0.68
LCOR-209ENST00000540664 FRMPD2Q68DX3 1309 aaPredicted RBP10.8□□□□□ -0.68
LCOR-209ENST00000540664 EDIL3O43854 480 aa10.8□□□□□ -0.68
LCOR-209ENST00000540664 ECE2O60344 883 aa10.8□□□□□ -0.68
LCOR-209ENST00000540664 RPN1P04843 607 aaKnown RBP10.8□□□□□ -0.68
LCOR-209ENST00000540664 OR52Z1P0C646 297 aa10.8□□□□□ -0.68
LCOR-209ENST00000540664 CDC25AP30304 524 aa10.8□□□□□ -0.68
LCOR-209ENST00000540664 CLEC10AQ8IUN9 316 aa10.8□□□□□ -0.68
LCOR-209ENST00000540664 TMEM139Q8IV31 216 aa10.8□□□□□ -0.68
LCOR-209ENST00000540664 REXO1Q8N1G1 1221 aaKnown RBP10.8□□□□□ -0.68
LCOR-209ENST00000540664 CNKSR1Q969H4 720 aa10.8□□□□□ -0.68
LCOR-209ENST00000540664 MKL1Q969V6 931 aa10.8□□□□□ -0.68
LCOR-209ENST00000540664 BLZF1Q9H2G9 400 aa10.8□□□□□ -0.68
LCOR-209ENST00000540664 CUEDC2Q9H467 287 aa10.8□□□□□ -0.68
LCOR-209ENST00000540664 JMJD4Q9H9V9 463 aa10.8□□□□□ -0.68
LCOR-209ENST00000540664 MAGEF1Q9HAY2 307 aa10.8□□□□□ -0.68
LCOR-209ENST00000540664 VAT1LQ9HCJ6 419 aa10.8□□□□□ -0.68
LCOR-209ENST00000540664 FAM198AQ9UFP1 575 aa10.8□□□□□ -0.68
LCOR-209ENST00000540664 SERPINA10Q9UK55 444 aa10.8□□□□□ -0.68
LCOR-209ENST00000540664 PSME4Q14997 1843 aa10.8□□□□□ -0.68
LCOR-209ENST00000540664 PNMA6FA0A0J9YX94 578 aa10.8□□□□□ -0.68
LCOR-209ENST00000540664 PP2D1A8MPX8 630 aa10.8□□□□□ -0.68
LCOR-209ENST00000540664 CTIFO43310 598 aaKnown RBP10.8□□□□□ -0.68
LCOR-209ENST00000540664 NRDCO43847 1150 aa10.8□□□□□ -0.68
LCOR-209ENST00000540664 CDK11BP21127 795 aaKnown RBP10.8□□□□□ -0.68
LCOR-209ENST00000540664 PBX1P40424 430 aa10.8□□□□□ -0.68
LCOR-209ENST00000540664 STAT6P42226 847 aa10.8□□□□□ -0.68
LCOR-209ENST00000540664 KCNB1Q14721 858 aa10.8□□□□□ -0.68
LCOR-209ENST00000540664 GPATCH4Q5T3I0 446 aaKnown RBP10.8□□□□□ -0.68
LCOR-209ENST00000540664 SPECC1LQ69YQ0 1117 aa10.8□□□□□ -0.68
LCOR-209ENST00000540664 SMYD4Q8IYR2 804 aaPredicted RBP10.8□□□□□ -0.68
LCOR-209ENST00000540664 TBCKQ8TEA7 893 aa10.8□□□□□ -0.68
LCOR-209ENST00000540664 LRRC15Q8TF66 581 aa10.8□□□□□ -0.68
LCOR-209ENST00000540664 RWDD2AQ9UIY3 292 aa10.8□□□□□ -0.68
LCOR-209ENST00000540664 COL2A1P02458 1487 aaPredicted RBP10.79□□□□□ -0.68
LCOR-209ENST00000540664 LRRC10BA6NIK2 292 aa10.79□□□□□ -0.68
LCOR-209ENST00000540664 KLRC4O43908 158 aa10.79□□□□□ -0.68
LCOR-209ENST00000540664 CCNT1O60563 726 aaKnown RBP10.79□□□□□ -0.68
LCOR-209ENST00000540664 UBA7P41226 1012 aa10.79□□□□□ -0.68
LCOR-209ENST00000540664 CLK2P49760 499 aaKnown RBP10.79□□□□□ -0.68
LCOR-209ENST00000540664 PTPN14Q15678 1187 aa10.79□□□□□ -0.68
LCOR-209ENST00000540664 LETM2Q2VYF4 491 aa10.79□□□□□ -0.68
LCOR-209ENST00000540664 RRAGBQ5VZM2 374 aa10.79□□□□□ -0.68
LCOR-209ENST00000540664 CEP135Q66GS9 1140 aa10.79□□□□□ -0.68
LCOR-209ENST00000540664 TATDN1Q6P1N9 297 aa10.79□□□□□ -0.68
LCOR-209ENST00000540664 SH3BP5LQ7L8J4 393 aa10.79□□□□□ -0.68
LCOR-209ENST00000540664 IGSF22Q8N9C0 903 aa10.79□□□□□ -0.68
LCOR-209ENST00000540664 FBXO41Q8TF61 875 aa10.79□□□□□ -0.68
LCOR-209ENST00000540664 MTMR9Q96QG7 549 aa10.79□□□□□ -0.68
LCOR-209ENST00000540664 ZNF219Q9P2Y4 722 aaPredicted RBP10.79□□□□□ -0.68
LCOR-209ENST00000540664 ADD3Q9UEY8 706 aaKnown RBP10.79□□□□□ -0.68
LCOR-209ENST00000540664 PCDHAC2Q9Y5I4 1007 aa10.79□□□□□ -0.68
LCOR-209ENST00000540664 ATRNL1Q5VV63 1379 aa10.79□□□□□ -0.68
LCOR-209ENST00000540664 DDTLA6NHG4 134 aaPredicted RBP10.78□□□□□ -0.68
LCOR-209ENST00000540664 KIF2AO00139 706 aaPredicted RBP10.78□□□□□ -0.68
LCOR-209ENST00000540664 PPP1R11O60927 126 aaPredicted RBP10.78□□□□□ -0.68
LCOR-209ENST00000540664 BAG6P46379 1132 aa10.78□□□□□ -0.68
LCOR-209ENST00000540664 EIF6P56537 245 aaKnown RBP10.78□□□□□ -0.68
LCOR-209ENST00000540664 SF3B2Q13435 895 aaKnown RBP10.78□□□□□ -0.68
LCOR-209ENST00000540664 HSP90AA4PQ58FG1 418 aa10.78□□□□□ -0.68
LCOR-209ENST00000540664 CC2D2BQ6DHV5 1058 aa10.78□□□□□ -0.68
LCOR-209ENST00000540664 DEFB132Q7Z7B7 95 aa10.78□□□□□ -0.68
LCOR-209ENST00000540664 FCHSD1Q86WN1 690 aa10.78□□□□□ -0.68
LCOR-209ENST00000540664 KIAA0825Q8IV33 1275 aa10.78□□□□□ -0.68
LCOR-209ENST00000540664 ADGRF4Q8IZF3 695 aa10.78□□□□□ -0.68
LCOR-209ENST00000540664 TC2NQ8N9U0 490 aa10.78□□□□□ -0.68
LCOR-209ENST00000540664 PPP1R13BQ96KQ4 1090 aa10.78□□□□□ -0.68
LCOR-209ENST00000540664 CTAGE1Q96RT6 745 aa10.78□□□□□ -0.68
LCOR-209ENST00000540664 PDGFDQ9GZP0 370 aaPredicted RBP10.78□□□□□ -0.68
LCOR-209ENST00000540664 RIC8AQ9NPQ8 531 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms