RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 ACBD3Q9H3P7 528 aa13.8□□□□□ -0.2
NPC1-202ENST00000540608 FAN1Q9Y2M0 1017 aa13.8□□□□□ -0.2
NPC1-202ENST00000540608 SPATA31A5Q5VU36 1347 aa13.79□□□□□ -0.2
NPC1-202ENST00000540608 SPATA31A7Q8IWB4 1347 aa13.79□□□□□ -0.2
NPC1-202ENST00000540608 KLRC4O43908 158 aa13.79□□□□□ -0.2
NPC1-202ENST00000540608 DNM2P50570 870 aa13.79□□□□□ -0.2
NPC1-202ENST00000540608 USP14P54578 494 aa13.79□□□□□ -0.2
NPC1-202ENST00000540608 HERVK_113P62684 666 aa13.79□□□□□ -0.2
NPC1-202ENST00000540608 KRT83P78385 493 aa13.79□□□□□ -0.2
NPC1-202ENST00000540608 MECOMQ03112 1051 aa13.79□□□□□ -0.2
NPC1-202ENST00000540608 SLC20A2Q08357 652 aa13.79□□□□□ -0.2
NPC1-202ENST00000540608 STIM1Q13586 685 aa13.79□□□□□ -0.2
NPC1-202ENST00000540608 HSP90B2PQ58FF3 399 aa13.79□□□□□ -0.2
NPC1-202ENST00000540608 PAPD7Q5XG87 772 aaKnown RBP13.79□□□□□ -0.2
NPC1-202ENST00000540608 RCSD1Q6JBY9 416 aa13.79□□□□□ -0.2
NPC1-202ENST00000540608 NOC3LQ8WTT2 800 aaKnown RBP13.79□□□□□ -0.2
NPC1-202ENST00000540608 RHOBTB3O94955 611 aa13.79□□□□□ -0.2
NPC1-202ENST00000540608 MCM3P25205 808 aa13.79□□□□□ -0.2
NPC1-202ENST00000540608 GIMAP8Q8ND71 665 aaPredicted RBP13.79□□□□□ -0.2
NPC1-202ENST00000540608 TRERF1Q96PN7 1200 aa13.79□□□□□ -0.2
NPC1-202ENST00000540608 VIPAS39Q9H9C1 493 aa13.79□□□□□ -0.2
NPC1-202ENST00000540608 MED4Q9NPJ6 270 aa13.79□□□□□ -0.2
NPC1-202ENST00000540608 MAGEC2Q9UBF1 373 aaPredicted RBP13.79□□□□□ -0.2
NPC1-202ENST00000540608 ARPP21Q9UBL0 812 aaPredicted RBP13.79□□□□□ -0.2
NPC1-202ENST00000540608 SAR1BQ9Y6B6 198 aa13.79□□□□□ -0.2
NPC1-202ENST00000540608 FAM205AQ6ZU69 1335 aa13.79□□□□□ -0.2
NPC1-202ENST00000540608 TSPY2A6NKD2 308 aa13.78□□□□□ -0.2
NPC1-202ENST00000540608 LRRIQ3A6PVS8 624 aaPredicted RBP13.78□□□□□ -0.2
NPC1-202ENST00000540608 M0R2N6 131 aa13.78□□□□□ -0.2
NPC1-202ENST00000540608 PSMA7O14818 248 aa13.78□□□□□ -0.2
NPC1-202ENST00000540608 SRGNP10124 158 aa13.78□□□□□ -0.2
NPC1-202ENST00000540608 MEA1Q16626 185 aa13.78□□□□□ -0.2
NPC1-202ENST00000540608 CCDC122Q5T0U0 273 aa13.78□□□□□ -0.2
NPC1-202ENST00000540608 TBC1D9BQ66K14 1250 aa13.78□□□□□ -0.2
NPC1-202ENST00000540608 SMARCC1Q92922 1105 aaPredicted RBP13.78□□□□□ -0.2
NPC1-202ENST00000540608 NUP58Q9BVL2 599 aa13.78□□□□□ -0.2
NPC1-202ENST00000540608 CCSER1Q9C0I3 900 aa13.78□□□□□ -0.2
NPC1-202ENST00000540608 KBTBD4Q9NVX7 518 aa13.78□□□□□ -0.2
NPC1-202ENST00000540608 BAZ2BQ9UIF8 2168 aaKnown RBP13.78□□□□□ -0.2
NPC1-202ENST00000540608 RPS6KA5O75582 802 aa13.78□□□□□ -0.2
NPC1-202ENST00000540608 CYP2D6P10635 497 aa13.78□□□□□ -0.2
NPC1-202ENST00000540608 TTI2Q6NXR4 508 aa13.78□□□□□ -0.2
NPC1-202ENST00000540608 LEKR1Q6ZMV7 388 aa13.78□□□□□ -0.2
NPC1-202ENST00000540608 EHBP1Q8NDI1 1231 aa13.78□□□□□ -0.2
NPC1-202ENST00000540608 DHTKD1Q96HY7 919 aaPredicted RBP13.78□□□□□ -0.2
NPC1-202ENST00000540608 TRIM47Q96LD4 638 aa13.78□□□□□ -0.2
NPC1-202ENST00000540608 HDAC6Q9UBN7 1215 aa13.78□□□□□ -0.2
NPC1-202ENST00000540608 CCDC194A0A1B0GVG4 234 aa13.77□□□□□ -0.2
NPC1-202ENST00000540608 NUTM2BA6NNL0 878 aaPredicted RBP13.77□□□□□ -0.2
NPC1-202ENST00000540608 NUTM2EB1AL46 878 aaPredicted RBP13.77□□□□□ -0.2
NPC1-202ENST00000540608 ENC1O14682 589 aa13.77□□□□□ -0.2
NPC1-202ENST00000540608 ATP1A1P05023 1023 aaKnown RBP13.77□□□□□ -0.2
NPC1-202ENST00000540608 GTF2E1P29083 439 aaPredicted RBP13.77□□□□□ -0.2
NPC1-202ENST00000540608 UBA7P41226 1012 aa13.77□□□□□ -0.2
NPC1-202ENST00000540608 RETREG2Q8NC44 543 aa13.77□□□□□ -0.2
NPC1-202ENST00000540608 CCDC102AQ96A19 550 aa13.77□□□□□ -0.2
NPC1-202ENST00000540608 RPGRIP1Q96KN7 1286 aa13.77□□□□□ -0.2
NPC1-202ENST00000540608 KAT14Q9H8E8 782 aa13.77□□□□□ -0.2
NPC1-202ENST00000540608 FEZ2Q9UHY8 353 aaPredicted RBP13.77□□□□□ -0.2
NPC1-202ENST00000540608 TARSL2A2RTX5 802 aaKnown RBP13.77□□□□□ -0.21
NPC1-202ENST00000540608 PES1O00541 588 aaKnown RBP13.77□□□□□ -0.21
NPC1-202ENST00000540608 IVLP07476 585 aa13.77□□□□□ -0.21
NPC1-202ENST00000540608 DGKHQ86XP1 1220 aa13.77□□□□□ -0.21
NPC1-202ENST00000540608 RASSF8Q8NHQ8 419 aa13.77□□□□□ -0.21
NPC1-202ENST00000540608 ANKS1AQ92625 1134 aa13.77□□□□□ -0.21
NPC1-202ENST00000540608 GPKOWQ92917 476 aaPredicted RBP eCLIP13.77□□□□□ -0.212e-6■■■■□ 21.7
NPC1-202ENST00000540608 MMS19Q96T76 1030 aa13.77□□□□□ -0.21
NPC1-202ENST00000540608 TTYH3Q9C0H2 523 aa13.77□□□□□ -0.21
NPC1-202ENST00000540608 TMEM60Q9H2L4 133 aa13.77□□□□□ -0.21
NPC1-202ENST00000540608 EXOC1Q9NV70 894 aa13.77□□□□□ -0.21
NPC1-202ENST00000540608 TFCP2L1Q9NZI6 479 aa13.77□□□□□ -0.21
NPC1-202ENST00000540608 PCDHA6Q9UN73 950 aa13.77□□□□□ -0.21
NPC1-202ENST00000540608 PCDHA8Q9Y5H6 950 aa13.77□□□□□ -0.21
NPC1-202ENST00000540608 PP2D1A8MPX8 630 aa13.77□□□□□ -0.21
NPC1-202ENST00000540608 KRT86O43790 486 aa13.77□□□□□ -0.21
NPC1-202ENST00000540608 CYLC1P35663 651 aaPredicted RBP13.77□□□□□ -0.21
NPC1-202ENST00000540608 AARSP49588 968 aaKnown RBP eCLIP13.77□□□□□ -0.21
NPC1-202ENST00000540608 GALNT17Q6IS24 598 aa13.77□□□□□ -0.21
NPC1-202ENST00000540608 KIAA1328Q86T90 577 aa13.77□□□□□ -0.21
NPC1-202ENST00000540608 CCDC170Q8IYT3 715 aa13.77□□□□□ -0.21
NPC1-202ENST00000540608 RASGRP4Q8TDF6 673 aa13.77□□□□□ -0.21
NPC1-202ENST00000540608 TUBGCP2Q9BSJ2 902 aa13.77□□□□□ -0.21
NPC1-202ENST00000540608 LAMB1P07942 1786 aa13.76□□□□□ -0.21
NPC1-202ENST00000540608 B4DLN1 442 aa13.76□□□□□ -0.21
NPC1-202ENST00000540608 LAD1O00515 517 aa13.76□□□□□ -0.21
NPC1-202ENST00000540608 PRDX5P30044 214 aa13.76□□□□□ -0.21
NPC1-202ENST00000540608 NT5C2P49902 561 aa13.76□□□□□ -0.21
NPC1-202ENST00000540608 GNAQP50148 359 aa13.76□□□□□ -0.21
NPC1-202ENST00000540608 CKAP4Q07065 602 aaKnown RBP13.76□□□□□ -0.21
NPC1-202ENST00000540608 MAP9Q49MG5 647 aa13.76□□□□□ -0.21
NPC1-202ENST00000540608 CCDC24Q8N4L8 307 aa13.76□□□□□ -0.21
NPC1-202ENST00000540608 DAGLBQ8NCG7 672 aa13.76□□□□□ -0.21
NPC1-202ENST00000540608 JAKMIP2Q96AA8 810 aa13.76□□□□□ -0.21
NPC1-202ENST00000540608 DUSP9Q99956 384 aaKnown RBP13.76□□□□□ -0.21
NPC1-202ENST00000540608 ZNHIT6Q9NWK9 470 aaKnown RBP13.76□□□□□ -0.21
NPC1-202ENST00000540608 TFR2Q9UP52 801 aa13.76□□□□□ -0.21
NPC1-202ENST00000540608 RASSF10A6NK89 507 aa13.76□□□□□ -0.21
NPC1-202ENST00000540608 EIF3CLB5ME19 914 aaKnown RBP13.76□□□□□ -0.21
NPC1-202ENST00000540608 PRPHP41219 470 aa13.76□□□□□ -0.21
NPC1-202ENST00000540608 TFAP4Q01664 338 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms