RNA–Protein interactions for RNA: ENST00000539573.5

NDUFA9-205, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 3

Gene NDUFA9, Length 500 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-205ENST00000539573 RETREG2Q8NC44 543 aa10.67□□□□□ -0.7
NDUFA9-205ENST00000539573 KIFC2Q96AC6 838 aa10.67□□□□□ -0.7
NDUFA9-205ENST00000539573 BCL11AQ9H165 835 aa10.67□□□□□ -0.7
NDUFA9-205ENST00000539573 ARMT1Q9H993 441 aa10.67□□□□□ -0.7
NDUFA9-205ENST00000539573 YBX2Q9Y2T7 364 aaKnown RBP10.67□□□□□ -0.7
NDUFA9-205ENST00000539573 COG6Q9Y2V7 657 aa10.67□□□□□ -0.7
NDUFA9-205ENST00000539573 UNC80Q8N2C7 3258 aa10.67□□□□□ -0.7
NDUFA9-205ENST00000539573 SIPA1L1O43166 1804 aa10.66□□□□□ -0.7
NDUFA9-205ENST00000539573 MYADML2A6NDP7 307 aa10.66□□□□□ -0.7
NDUFA9-205ENST00000539573 USP17L12C9JPN9 530 aa10.66□□□□□ -0.7
NDUFA9-205ENST00000539573 USP17L21D6R901 530 aa10.66□□□□□ -0.7
NDUFA9-205ENST00000539573 ATP2A1O14983 1001 aa10.66□□□□□ -0.7
NDUFA9-205ENST00000539573 CD4P01730 458 aa10.66□□□□□ -0.7
NDUFA9-205ENST00000539573 KCNQ1P51787 676 aa10.66□□□□□ -0.7
NDUFA9-205ENST00000539573 OAZ1P54368 228 aa10.66□□□□□ -0.7
NDUFA9-205ENST00000539573 FSCN1Q16658 493 aaKnown RBP10.66□□□□□ -0.7
NDUFA9-205ENST00000539573 C12orf60Q5U649 245 aa10.66□□□□□ -0.7
NDUFA9-205ENST00000539573 C16orf86Q6ZW13 317 aa10.66□□□□□ -0.7
NDUFA9-205ENST00000539573 TLK2Q86UE8 772 aa10.66□□□□□ -0.7
NDUFA9-205ENST00000539573 CLEC10AQ8IUN9 316 aa10.66□□□□□ -0.7
NDUFA9-205ENST00000539573 SIAH1Q8IUQ4 282 aa10.66□□□□□ -0.7
NDUFA9-205ENST00000539573 ITPRIPQ8IWB1 547 aa10.66□□□□□ -0.7
NDUFA9-205ENST00000539573 LCORLQ8N3X6 602 aa10.66□□□□□ -0.7
NDUFA9-205ENST00000539573 TMEM57Q8N5G2 664 aa10.66□□□□□ -0.7
NDUFA9-205ENST00000539573 PHOSPHO2Q8TCD6 241 aa10.66□□□□□ -0.7
NDUFA9-205ENST00000539573 SLC9A7Q96T83 725 aa10.66□□□□□ -0.7
NDUFA9-205ENST00000539573 FTOQ9C0B1 505 aaKnown RBP eCLIP10.66□□□□□ -0.7
NDUFA9-205ENST00000539573 FEM1BQ9UK73 627 aa10.66□□□□□ -0.7
NDUFA9-205ENST00000539573 DNAJC25-GNG10A0A024R161 153 aa10.65□□□□□ -0.7
NDUFA9-205ENST00000539573 F5H6K3 240 aa10.65□□□□□ -0.7
NDUFA9-205ENST00000539573 DYNC1LI2O43237 492 aaPredicted RBP10.65□□□□□ -0.7
NDUFA9-205ENST00000539573 GPR37L1O60883 481 aa10.65□□□□□ -0.7
NDUFA9-205ENST00000539573 MBD4O95243 580 aa10.65□□□□□ -0.7
NDUFA9-205ENST00000539573 RFC2P35250 354 aa10.65□□□□□ -0.7
NDUFA9-205ENST00000539573 KCNJ6P48051 423 aa10.65□□□□□ -0.7
NDUFA9-205ENST00000539573 BEX3Q00994 111 aa10.65□□□□□ -0.7
NDUFA9-205ENST00000539573 KLRC3Q07444 240 aa10.65□□□□□ -0.7
NDUFA9-205ENST00000539573 IQSEC1Q6DN90 963 aa10.65□□□□□ -0.7
NDUFA9-205ENST00000539573 CCDC144CPQ8IYA2 1237 aa10.65□□□□□ -0.7
NDUFA9-205ENST00000539573 ZNF444Q8N0Y2 327 aaPredicted RBP10.65□□□□□ -0.7
NDUFA9-205ENST00000539573 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.65□□□□□ -0.7
NDUFA9-205ENST00000539573 ARNTL2Q8WYA1 636 aa10.65□□□□□ -0.7
NDUFA9-205ENST00000539573 UIMC1Q96RL1 719 aa10.65□□□□□ -0.7
NDUFA9-205ENST00000539573 CRBNQ96SW2 442 aa10.65□□□□□ -0.7
NDUFA9-205ENST00000539573 MPHOSPH6Q99547 160 aaKnown RBP10.65□□□□□ -0.7
NDUFA9-205ENST00000539573 ZBED2Q9BTP6 218 aa10.65□□□□□ -0.7
NDUFA9-205ENST00000539573 EPHX3Q9H6B9 360 aa10.65□□□□□ -0.7
NDUFA9-205ENST00000539573 RAVER2Q9HCJ3 691 aaKnown RBP10.65□□□□□ -0.7
NDUFA9-205ENST00000539573 POLR3EQ9NVU0 708 aa10.65□□□□□ -0.7
NDUFA9-205ENST00000539573 ARPP21Q9UBL0 812 aaPredicted RBP10.65□□□□□ -0.7
NDUFA9-205ENST00000539573 NOD1Q9Y239 953 aa10.65□□□□□ -0.7
NDUFA9-205ENST00000539573 SLC4A4Q9Y6R1 1079 aa10.65□□□□□ -0.7
NDUFA9-205ENST00000539573 RAD50Q92878 1312 aa10.64□□□□□ -0.71
NDUFA9-205ENST00000539573 HMMRO75330 724 aa10.64□□□□□ -0.71
NDUFA9-205ENST00000539573 CA3P07451 260 aa10.64□□□□□ -0.71
NDUFA9-205ENST00000539573 POU3F3P20264 500 aaPredicted RBP10.64□□□□□ -0.71
NDUFA9-205ENST00000539573 PPP4R3BQ5MIZ7 849 aa10.64□□□□□ -0.71
NDUFA9-205ENST00000539573 DEFB128Q7Z7B8 93 aa10.64□□□□□ -0.71
NDUFA9-205ENST00000539573 CHURC1Q8WUH1 139 aa10.64□□□□□ -0.71
NDUFA9-205ENST00000539573 NOC4LQ9BVI4 516 aaKnown RBP10.64□□□□□ -0.71
NDUFA9-205ENST00000539573 C1orf115Q9H7X2 142 aa10.64□□□□□ -0.71
NDUFA9-205ENST00000539573 ACAD9Q9H845 621 aa10.64□□□□□ -0.71
NDUFA9-205ENST00000539573 HOMER2Q9NSB8 354 aa10.64□□□□□ -0.71
NDUFA9-205ENST00000539573 PAG1Q9NWQ8 432 aa10.64□□□□□ -0.71
NDUFA9-205ENST00000539573 NYAP2Q9P242 653 aa10.64□□□□□ -0.71
NDUFA9-205ENST00000539573 CLIP2Q9UDT6 1046 aa10.64□□□□□ -0.71
NDUFA9-205ENST00000539573 Q9Y3F1 56 aa10.64□□□□□ -0.71
NDUFA9-205ENST00000539573 MTCH2Q9Y6C9 303 aa10.64□□□□□ -0.71
NDUFA9-205ENST00000539573 MYH1P12882 1939 aa10.64□□□□□ -0.71
NDUFA9-205ENST00000539573 ALADP13716 330 aa10.63□□□□□ -0.71
NDUFA9-205ENST00000539573 MYOGP15173 224 aa10.63□□□□□ -0.71
NDUFA9-205ENST00000539573 SSTR3P32745 418 aaPredicted RBP10.63□□□□□ -0.71
NDUFA9-205ENST00000539573 CPT1AP50416 773 aa10.63□□□□□ -0.71
NDUFA9-205ENST00000539573 NKX3-2P78367 333 aa10.63□□□□□ -0.71
NDUFA9-205ENST00000539573 BFSP2Q13515 415 aa10.63□□□□□ -0.71
NDUFA9-205ENST00000539573 TKFCQ3LXA3 575 aa10.63□□□□□ -0.71
NDUFA9-205ENST00000539573 FAM47CQ5HY64 1035 aa10.63□□□□□ -0.71
NDUFA9-205ENST00000539573 CCDC155Q8N6L0 562 aa10.63□□□□□ -0.71
NDUFA9-205ENST00000539573 SLC43A3Q8NBI5 491 aa10.63□□□□□ -0.71
NDUFA9-205ENST00000539573 REPS2Q8NFH8 660 aa10.63□□□□□ -0.71
NDUFA9-205ENST00000539573 KIF1BPQ96EK5 621 aa10.63□□□□□ -0.71
NDUFA9-205ENST00000539573 NUP88Q99567 741 aaPredicted RBP10.63□□□□□ -0.71
NDUFA9-205ENST00000539573 TRPV6Q9H1D0 765 aa10.63□□□□□ -0.71
NDUFA9-205ENST00000539573 CERS4Q9HA82 394 aa10.63□□□□□ -0.71
NDUFA9-205ENST00000539573 IL1RAPL2Q9NP60 686 aa10.63□□□□□ -0.71
NDUFA9-205ENST00000539573 EXOC6BQ9Y2D4 811 aa10.63□□□□□ -0.71
NDUFA9-205ENST00000539573 RIPK3Q9Y572 518 aa10.63□□□□□ -0.71
NDUFA9-205ENST00000539573 SMIM22K7EJ46 135 aa10.62□□□□□ -0.71
NDUFA9-205ENST00000539573 PRKAB2O43741 272 aa10.62□□□□□ -0.71
NDUFA9-205ENST00000539573 TLL1O43897 1013 aa10.62□□□□□ -0.71
NDUFA9-205ENST00000539573 B4GALT4O60513 344 aa10.62□□□□□ -0.71
NDUFA9-205ENST00000539573 KPNA6O60684 536 aa10.62□□□□□ -0.71
NDUFA9-205ENST00000539573 NDUFB10O96000 172 aa10.62□□□□□ -0.71
NDUFA9-205ENST00000539573 SLC3A2P08195 630 aaKnown RBP10.62□□□□□ -0.71
NDUFA9-205ENST00000539573 KIAA1211Q6ZU35 1233 aa10.62□□□□□ -0.71
NDUFA9-205ENST00000539573 ALYREFQ86V81 257 aaKnown RBP10.62□□□□□ -0.71
NDUFA9-205ENST00000539573 FAM160B2Q86V87 743 aa10.62□□□□□ -0.71
NDUFA9-205ENST00000539573 RPAP2Q8IXW5 612 aaPredicted RBP10.62□□□□□ -0.71
NDUFA9-205ENST00000539573 RHPN1Q8TCX5 695 aa10.62□□□□□ -0.71
NDUFA9-205ENST00000539573 SCLYQ96I15 445 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms