RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 PCP11498 1178 aaKnown RBP26.21■■□□□ 1.79
SCARB1-206ENST00000539320 MAMDC4Q6UXC1 1216 aa26.21■■□□□ 1.79
SCARB1-206ENST00000539320 TBC1D10CQ8IV04 446 aa26.21■■□□□ 1.79
SCARB1-206ENST00000539320 RNF146Q9NTX7 359 aa26.21■■□□□ 1.79
SCARB1-206ENST00000539320 LAMA4Q16363 1823 aa26.21■■□□□ 1.79
SCARB1-206ENST00000539320 HIP1O00291 1037 aa26.2■■□□□ 1.78
SCARB1-206ENST00000539320 TOP1P11387 765 aaKnown RBP26.2■■□□□ 1.78
SCARB1-206ENST00000539320 TKFCQ3LXA3 575 aa26.2■■□□□ 1.78
SCARB1-206ENST00000539320 AKNAD1Q5T1N1 836 aa26.2■■□□□ 1.78
SCARB1-206ENST00000539320 FGD4Q96M96 766 aa26.2■■□□□ 1.78
SCARB1-206ENST00000539320 TCP11L1Q9NUJ3 509 aa26.2■■□□□ 1.78
SCARB1-206ENST00000539320 ZHX1Q9UKY1 873 aaPredicted RBP26.2■■□□□ 1.78
SCARB1-206ENST00000539320 PRR12Q9ULL5 1215 aa26.2■■□□□ 1.78
SCARB1-206ENST00000539320 MCM3APO60318 1980 aa26.19■■□□□ 1.78
SCARB1-206ENST00000539320 SNAI1O95863 264 aaPredicted RBP26.19■■□□□ 1.78
SCARB1-206ENST00000539320 CWC27Q6UX04 472 aaKnown RBP26.19■■□□□ 1.78
SCARB1-206ENST00000539320 MFSD6Q6ZSS7 791 aa26.19■■□□□ 1.78
SCARB1-206ENST00000539320 RNF180Q86T96 592 aa26.19■■□□□ 1.78
SCARB1-206ENST00000539320 LENG1Q96BZ8 264 aaPredicted RBP26.19■■□□□ 1.78
SCARB1-206ENST00000539320 AGBL1Q96MI9 1066 aa26.19■■□□□ 1.78
SCARB1-206ENST00000539320 RNF41Q9H4P4 317 aaPredicted RBP26.19■■□□□ 1.78
SCARB1-206ENST00000539320 ATP11BQ9Y2G3 1177 aa26.19■■□□□ 1.78
SCARB1-206ENST00000539320 PGK1P00558 417 aa26.18■■□□□ 1.78
SCARB1-206ENST00000539320 ADCYAP1R1P41586 468 aa26.18■■□□□ 1.78
SCARB1-206ENST00000539320 SNX17Q15036 470 aa26.18■■□□□ 1.78
SCARB1-206ENST00000539320 CCDC174Q6PII3 467 aa26.18■■□□□ 1.78
SCARB1-206ENST00000539320 SLC39A5Q6ZMH5 540 aa26.18■■□□□ 1.78
SCARB1-206ENST00000539320 TMEM47Q9BQJ4 181 aa26.18■■□□□ 1.78
SCARB1-206ENST00000539320 UBE2OQ9C0C9 1292 aaKnown RBP26.18■■□□□ 1.78
SCARB1-206ENST00000539320 A1CFQ9NQ94 594 aaKnown RBP26.18■■□□□ 1.78
SCARB1-206ENST00000539320 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.18■■□□□ 1.78
SCARB1-206ENST00000539320 PHF24Q9UPV7 400 aa26.18■■□□□ 1.78
SCARB1-206ENST00000539320 SZT2Q5T011 3432 aa26.17■■□□□ 1.78
SCARB1-206ENST00000539320 ALAS1P13196 640 aa26.17■■□□□ 1.78
SCARB1-206ENST00000539320 FERMT2Q96AC1 680 aa26.17■■□□□ 1.78
SCARB1-206ENST00000539320 FAM184BQ9ULE4 1060 aa26.17■■□□□ 1.78
SCARB1-206ENST00000539320 NEDD4P46934 1319 aa26.16■■□□□ 1.78
SCARB1-206ENST00000539320 POTEB2H3BUK9 544 aa26.16■■□□□ 1.78
SCARB1-206ENST00000539320 SOX1O00570 391 aaPredicted RBP26.16■■□□□ 1.78
SCARB1-206ENST00000539320 SNAP25P60880 206 aa26.16■■□□□ 1.78
SCARB1-206ENST00000539320 MDM2Q00987 491 aaPredicted RBP26.16■■□□□ 1.78
SCARB1-206ENST00000539320 TRIM60Q495X7 471 aa26.16■■□□□ 1.78
SCARB1-206ENST00000539320 ARMCX2Q7L311 632 aa26.16■■□□□ 1.78
SCARB1-206ENST00000539320 TDHQ8IZJ6 230 aa26.16■■□□□ 1.78
SCARB1-206ENST00000539320 TRERF1Q96PN7 1200 aa26.16■■□□□ 1.78
SCARB1-206ENST00000539320 PRKAG2Q9UGJ0 569 aa26.16■■□□□ 1.78
SCARB1-206ENST00000539320 ADAMTS4O75173 837 aa26.15■■□□□ 1.78
SCARB1-206ENST00000539320 SYDE2Q5VT97 1194 aa26.15■■□□□ 1.78
SCARB1-206ENST00000539320 FAM133AQ8N9E0 248 aa26.15■■□□□ 1.78
SCARB1-206ENST00000539320 ESR2Q92731 530 aa26.15■■□□□ 1.78
SCARB1-206ENST00000539320 CCPG1Q9ULG6 757 aa26.15■■□□□ 1.78
SCARB1-206ENST00000539320 FRMPD2Q68DX3 1309 aaPredicted RBP26.14■■□□□ 1.78
SCARB1-206ENST00000539320 SYNRGQ9UMZ2 1314 aa26.14■■□□□ 1.78
SCARB1-206ENST00000539320 ZNF213O14771 459 aa26.14■■□□□ 1.78
SCARB1-206ENST00000539320 CNTN2Q02246 1040 aa26.14■■□□□ 1.78
SCARB1-206ENST00000539320 ACVR2BQ13705 512 aa26.14■■□□□ 1.78
SCARB1-206ENST00000539320 TTBK2Q6IQ55 1244 aa26.14■■□□□ 1.78
SCARB1-206ENST00000539320 BTNL9Q6UXG8 535 aa26.14■■□□□ 1.78
SCARB1-206ENST00000539320 LBHD1Q9BQE6 289 aaPredicted RBP26.14■■□□□ 1.78
SCARB1-206ENST00000539320 RANBP17Q9H2T7 1088 aaKnown RBP26.14■■□□□ 1.78
SCARB1-206ENST00000539320 ABHD16BQ9H3Z7 469 aa26.14■■□□□ 1.78
SCARB1-206ENST00000539320 ICAM1P05362 532 aa26.13■■□□□ 1.77
SCARB1-206ENST00000539320 PDHBP11177 359 aa26.13■■□□□ 1.77
SCARB1-206ENST00000539320 PDE4AP27815 886 aa26.13■■□□□ 1.77
SCARB1-206ENST00000539320 SLC16A2P36021 539 aa26.13■■□□□ 1.77
SCARB1-206ENST00000539320 NT5C2P49902 561 aa26.13■■□□□ 1.77
SCARB1-206ENST00000539320 C1orf53Q5VUE5 145 aa26.13■■□□□ 1.77
SCARB1-206ENST00000539320 LRCH3Q96II8 777 aa26.13■■□□□ 1.77
SCARB1-206ENST00000539320 TTC14Q96N46 770 aa26.13■■□□□ 1.77
SCARB1-206ENST00000539320 DSCC1Q9BVC3 393 aa26.13■■□□□ 1.77
SCARB1-206ENST00000539320 LTBP2Q14767 1821 aa26.13■■□□□ 1.77
SCARB1-206ENST00000539320 DUSP11O75319 330 aaKnown RBP26.12■■□□□ 1.77
SCARB1-206ENST00000539320 CCDC144CPQ8IYA2 1237 aa26.12■■□□□ 1.77
SCARB1-206ENST00000539320 GPCPD1Q9NPB8 672 aa26.12■■□□□ 1.77
SCARB1-206ENST00000539320 DNAH12Q6ZR08 3092 aa26.11■■□□□ 1.77
SCARB1-206ENST00000539320 A0A1W2PQ45 241 aaPredicted RBP26.11■■□□□ 1.77
SCARB1-206ENST00000539320 A0A1W2PQY0 241 aa26.11■■□□□ 1.77
SCARB1-206ENST00000539320 IRX6P78412 446 aaPredicted RBP26.11■■□□□ 1.77
SCARB1-206ENST00000539320 MUM1L1Q5H9M0 696 aa26.11■■□□□ 1.77
SCARB1-206ENST00000539320 TSEN34Q9BSV6 310 aaKnown RBP26.11■■□□□ 1.77
SCARB1-206ENST00000539320 KATNBL1Q9H079 304 aa26.11■■□□□ 1.77
SCARB1-206ENST00000539320 PRDM5Q9NQX1 630 aaPredicted RBP26.11■■□□□ 1.77
SCARB1-206ENST00000539320 PDLIM7Q9NR12 457 aa26.11■■□□□ 1.77
SCARB1-206ENST00000539320 LRRC37A2A6NM11 1700 aa26.11■■□□□ 1.77
SCARB1-206ENST00000539320 SOWAHBA6NEL2 793 aa26.1■■□□□ 1.77
SCARB1-206ENST00000539320 ASB14A6NK59 587 aa26.1■■□□□ 1.77
SCARB1-206ENST00000539320 ZNF543Q08ER8 600 aa26.1■■□□□ 1.77
SCARB1-206ENST00000539320 CCDC144BQ3MJ40 725 aa26.1■■□□□ 1.77
SCARB1-206ENST00000539320 LRIT3Q3SXY7 679 aa26.1■■□□□ 1.77
SCARB1-206ENST00000539320 TTC22Q5TAA0 569 aa26.1■■□□□ 1.77
SCARB1-206ENST00000539320 NSMFQ6X4W1 530 aa26.1■■□□□ 1.77
SCARB1-206ENST00000539320 KLHDC9Q8NEP7 349 aa26.1■■□□□ 1.77
SCARB1-206ENST00000539320 CYP39A1Q9NYL5 469 aa26.1■■□□□ 1.77
SCARB1-206ENST00000539320 ADCY6O43306 1168 aa26.09■■□□□ 1.77
SCARB1-206ENST00000539320 SNHG28P0DPA3 235 aa26.09■■□□□ 1.77
SCARB1-206ENST00000539320 GSPT1P15170 499 aaKnown RBP26.09■■□□□ 1.77
SCARB1-206ENST00000539320 IMMTQ16891 758 aaKnown RBP26.09■■□□□ 1.77
SCARB1-206ENST00000539320 ZKSCAN3Q9BRR0 538 aa26.09■■□□□ 1.77
SCARB1-206ENST00000539320 CTNNA3Q9UI47 895 aa26.09■■□□□ 1.77
SCARB1-206ENST00000539320 LCTP09848 1927 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms