RNA–Protein interactions for RNA: ENST00000539018.5

TUBD1-206, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-206ENST00000539018 SEMA6CQ9H3T2 930 aa10.06□□□□□ -0.8
TUBD1-206ENST00000539018 SSU72Q9NP77 194 aaKnown RBP10.06□□□□□ -0.8
TUBD1-206ENST00000539018 DAGLAQ9Y4D2 1042 aa10.06□□□□□ -0.8
TUBD1-206ENST00000539018 TACC3Q9Y6A5 838 aa10.06□□□□□ -0.8
TUBD1-206ENST00000539018 NPHP3Q7Z494 1330 aa10.06□□□□□ -0.8
TUBD1-206ENST00000539018 IGSF1Q8N6C5 1336 aa10.06□□□□□ -0.8
TUBD1-206ENST00000539018 LRRC37A3O60309 1634 aa10.05□□□□□ -0.8
TUBD1-206ENST00000539018 HMOX1P09601 288 aa10.05□□□□□ -0.8
TUBD1-206ENST00000539018 NFKBIBQ15653 356 aa10.05□□□□□ -0.8
TUBD1-206ENST00000539018 CWF19L2Q2TBE0 894 aaKnown RBP10.05□□□□□ -0.8
TUBD1-206ENST00000539018 PAOXQ6QHF9 649 aa10.05□□□□□ -0.8
TUBD1-206ENST00000539018 ISL2Q96A47 359 aa10.05□□□□□ -0.8
TUBD1-206ENST00000539018 EAF1Q96JC9 268 aaPredicted RBP10.05□□□□□ -0.8
TUBD1-206ENST00000539018 NT5C1AQ9BXI3 368 aa10.05□□□□□ -0.8
TUBD1-206ENST00000539018 LRRC3Q9BY71 257 aa10.05□□□□□ -0.8
TUBD1-206ENST00000539018 WNT10AQ9GZT5 417 aa10.05□□□□□ -0.8
TUBD1-206ENST00000539018 C7orf69Q9H7B7 122 aa10.05□□□□□ -0.8
TUBD1-206ENST00000539018 UBP1Q9NZI7 540 aa10.05□□□□□ -0.8
TUBD1-206ENST00000539018 USP19O94966 1318 aa10.05□□□□□ -0.8
TUBD1-206ENST00000539018 CACNA1FO60840 1977 aa10.05□□□□□ -0.8
TUBD1-206ENST00000539018 CRYBG1Q9Y4K1 1723 aa10.04□□□□□ -0.8
TUBD1-206ENST00000539018 ANP32AP39687 249 aaKnown RBP10.04□□□□□ -0.8
TUBD1-206ENST00000539018 ETF1P62495 437 aaKnown RBP10.04□□□□□ -0.8
TUBD1-206ENST00000539018 APOBRQ0VD83 1088 aa10.04□□□□□ -0.8
TUBD1-206ENST00000539018 REC114Q7Z4M0 266 aa10.04□□□□□ -0.8
TUBD1-206ENST00000539018 IFT57Q9NWB7 429 aa10.04□□□□□ -0.8
TUBD1-206ENST00000539018 PCOLCE2Q9UKZ9 415 aa10.04□□□□□ -0.8
TUBD1-206ENST00000539018 TNS3Q68CZ2 1445 aa10.04□□□□□ -0.8
TUBD1-206ENST00000539018 KIF16BQ96L93 1317 aa10.04□□□□□ -0.8
TUBD1-206ENST00000539018 PLEKHG2Q9H7P9 1386 aa10.03□□□□□ -0.8
TUBD1-206ENST00000539018 HMX2A2RU54 273 aa10.03□□□□□ -0.8
TUBD1-206ENST00000539018 FURINP09958 794 aa10.03□□□□□ -0.8
TUBD1-206ENST00000539018 HOXC9P31274 260 aa10.03□□□□□ -0.8
TUBD1-206ENST00000539018 NTF4P34130 210 aa10.03□□□□□ -0.8
TUBD1-206ENST00000539018 CRKP46108 304 aa10.03□□□□□ -0.8
TUBD1-206ENST00000539018 PDE4BQ07343 736 aa10.03□□□□□ -0.8
TUBD1-206ENST00000539018 SULT6B1Q6IMI4 303 aa10.03□□□□□ -0.8
TUBD1-206ENST00000539018 CDC37L1Q7L3B6 337 aa10.03□□□□□ -0.8
TUBD1-206ENST00000539018 KCT2Q8NC54 265 aa10.03□□□□□ -0.8
TUBD1-206ENST00000539018 ZNF507Q8TCN5 953 aa10.03□□□□□ -0.8
TUBD1-206ENST00000539018 ACBD3Q9H3P7 528 aa10.03□□□□□ -0.8
TUBD1-206ENST00000539018 VIRMAQ69YN4 1812 aaKnown RBP10.03□□□□□ -0.8
TUBD1-206ENST00000539018 DYRK3O43781 588 aa10.02□□□□□ -0.81
TUBD1-206ENST00000539018 EIF5BO60841 1220 aaKnown RBP10.02□□□□□ -0.81
TUBD1-206ENST00000539018 FBLN1P23142 703 aa10.02□□□□□ -0.81
TUBD1-206ENST00000539018 GRK4P32298 578 aa10.02□□□□□ -0.81
TUBD1-206ENST00000539018 PAK2Q13177 524 aa10.02□□□□□ -0.81
TUBD1-206ENST00000539018 ALDH1L2Q3SY69 923 aa10.02□□□□□ -0.81
TUBD1-206ENST00000539018 HSP90AB2PQ58FF8 381 aa10.02□□□□□ -0.81
TUBD1-206ENST00000539018 KRT28Q7Z3Y7 464 aa10.02□□□□□ -0.81
TUBD1-206ENST00000539018 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.02□□□□□ -0.81
TUBD1-206ENST00000539018 IP6K1Q92551 441 aa10.02□□□□□ -0.81
TUBD1-206ENST00000539018 NKD1Q969G9 470 aa10.02□□□□□ -0.81
TUBD1-206ENST00000539018 NHSL1Q5SYE7 1610 aa10.02□□□□□ -0.81
TUBD1-206ENST00000539018 LMO7Q8WWI1 1683 aa10.02□□□□□ -0.81
TUBD1-206ENST00000539018 HTATSF1O43719 755 aaKnown RBP10.01□□□□□ -0.81
TUBD1-206ENST00000539018 PGRP06401 933 aa10.01□□□□□ -0.81
TUBD1-206ENST00000539018 RARSP54136 660 aaKnown RBP10.01□□□□□ -0.81
TUBD1-206ENST00000539018 SEZ6Q53EL9 994 aa10.01□□□□□ -0.81
TUBD1-206ENST00000539018 EXOC6Q8TAG9 804 aa10.01□□□□□ -0.81
TUBD1-206ENST00000539018 RTF1Q92541 710 aaKnown RBP10.01□□□□□ -0.81
TUBD1-206ENST00000539018 ORAI2Q96SN7 254 aa10.01□□□□□ -0.81
TUBD1-206ENST00000539018 LGR6Q9HBX8 967 aa10.01□□□□□ -0.81
TUBD1-206ENST00000539018 POLR3KQ9Y2Y1 108 aaPredicted RBP10.01□□□□□ -0.81
TUBD1-206ENST00000539018 RGPD2P0DJD1 1756 aa10.01□□□□□ -0.81
TUBD1-206ENST00000539018 PXDNQ92626 1479 aa10□□□□□ -0.81
TUBD1-206ENST00000539018 ABCA3Q99758 1704 aa10□□□□□ -0.81
TUBD1-206ENST00000539018 IPO8O15397 1037 aaKnown RBP10□□□□□ -0.81
TUBD1-206ENST00000539018 CRBNQ96SW2 442 aa10□□□□□ -0.81
TUBD1-206ENST00000539018 ANP32EQ9BTT0 268 aa10□□□□□ -0.81
TUBD1-206ENST00000539018 BRMS1Q9HCU9 246 aa10□□□□□ -0.81
TUBD1-206ENST00000539018 INPP5FQ9Y2H2 1132 aa10□□□□□ -0.81
TUBD1-206ENST00000539018 CORINQ9Y5Q5 1042 aa10□□□□□ -0.81
TUBD1-206ENST00000539018 RGPD5Q99666 1765 aa10□□□□□ -0.81
TUBD1-206ENST00000539018 NCAPD2Q15021 1401 aa9.99□□□□□ -0.81
TUBD1-206ENST00000539018 GSC2O15499 205 aa9.99□□□□□ -0.81
TUBD1-206ENST00000539018 DYNC1LI2O43237 492 aaPredicted RBP9.99□□□□□ -0.81
TUBD1-206ENST00000539018 GRIN3BO60391 1043 aa9.99□□□□□ -0.81
TUBD1-206ENST00000539018 PLCG1P19174 1290 aa9.99□□□□□ -0.81
TUBD1-206ENST00000539018 ZKSCAN2Q63HK3 967 aa9.99□□□□□ -0.81
TUBD1-206ENST00000539018 RNF43Q68DV7 783 aa9.99□□□□□ -0.81
TUBD1-206ENST00000539018 SEZ6L2Q6UXD5 910 aa9.99□□□□□ -0.81
TUBD1-206ENST00000539018 UBE3DQ7Z6J8 389 aa9.99□□□□□ -0.81
TUBD1-206ENST00000539018 HID1Q8IV36 788 aa9.99□□□□□ -0.81
TUBD1-206ENST00000539018 SLITRK4Q8IW52 837 aa9.99□□□□□ -0.81
TUBD1-206ENST00000539018 GPRASP2Q96D09 838 aa9.99□□□□□ -0.81
TUBD1-206ENST00000539018 PHACTR3Q96KR7 559 aa9.99□□□□□ -0.81
TUBD1-206ENST00000539018 FBRSQ9HAH7 460 aa9.99□□□□□ -0.81
TUBD1-206ENST00000539018 SMC4Q9NTJ3 1288 aa9.99□□□□□ -0.81
TUBD1-206ENST00000539018 PRKAG2Q9UGJ0 569 aa9.99□□□□□ -0.81
TUBD1-206ENST00000539018 OVOS2A0A0G2JMS6 1433 aa9.99□□□□□ -0.81
TUBD1-206ENST00000539018 PLIN1O60240 522 aa9.98□□□□□ -0.81
TUBD1-206ENST00000539018 GCP02774 474 aa9.98□□□□□ -0.81
TUBD1-206ENST00000539018 FSTP19883 344 aa9.98□□□□□ -0.81
TUBD1-206ENST00000539018 MCM4P33991 863 aa9.98□□□□□ -0.81
TUBD1-206ENST00000539018 EXOSC9Q06265 439 aaKnown RBP9.98□□□□□ -0.81
TUBD1-206ENST00000539018 FTSJ3Q8IY81 847 aaKnown RBP9.98□□□□□ -0.81
TUBD1-206ENST00000539018 TSR2Q969E8 191 aaKnown RBP9.98□□□□□ -0.81
TUBD1-206ENST00000539018 SPATA32Q96LK8 384 aa9.98□□□□□ -0.81
TUBD1-206ENST00000539018 CHMP4AQ9BY43 222 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms